RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 C2orf83Q53S99 150 aa13.77□□□□□ -0.21
CTSB-222ENST00000531551 TMEM170AQ8WVE7 144 aa13.77□□□□□ -0.21
CTSB-222ENST00000531551 ST6GAL2Q96JF0 529 aa13.77□□□□□ -0.21
CTSB-222ENST00000531551 RNF126Q9BV68 326 aa13.77□□□□□ -0.21
CTSB-222ENST00000531551 THYN1Q9P016 225 aa13.77□□□□□ -0.21
CTSB-222ENST00000531551 FBXL7Q9UJT9 491 aa13.77□□□□□ -0.21
CTSB-222ENST00000531551 IGLV11-55A0A075B6I3 123 aa13.76□□□□□ -0.21
CTSB-222ENST00000531551 C15orf62A8K5M9 175 aa13.76□□□□□ -0.21
CTSB-222ENST00000531551 H3BUA1 57 aa13.76□□□□□ -0.21
CTSB-222ENST00000531551 RPLP1P05386 114 aaKnown RBP13.76□□□□□ -0.21
CTSB-222ENST00000531551 CD28P10747 220 aa13.76□□□□□ -0.21
CTSB-222ENST00000531551 HIST1H1BP16401 226 aaKnown RBP13.76□□□□□ -0.21
CTSB-222ENST00000531551 FOXE3Q13461 319 aa13.76□□□□□ -0.21
CTSB-222ENST00000531551 NOXA1Q86UR1 476 aa13.76□□□□□ -0.21
CTSB-222ENST00000531551 COMMD1Q8N668 190 aa13.76□□□□□ -0.21
CTSB-222ENST00000531551 C11orf1Q9H5F2 150 aa13.76□□□□□ -0.21
CTSB-222ENST00000531551 SLA2Q9H6Q3 261 aa13.76□□□□□ -0.21
CTSB-222ENST00000531551 FBN1P35555 2871 aaKnown RBP13.76□□□□□ -0.21
CTSB-222ENST00000531551 TSC22D2O75157 780 aa13.76□□□□□ -0.21
CTSB-222ENST00000531551 NDUFB8O95169 186 aa13.76□□□□□ -0.21
CTSB-222ENST00000531551 METTL15P1P0C7V9 234 aa13.76□□□□□ -0.21
CTSB-222ENST00000531551 OPRK1P41145 380 aa13.76□□□□□ -0.21
CTSB-222ENST00000531551 OR8G2PQ6IF36 304 aa13.76□□□□□ -0.21
CTSB-222ENST00000531551 ETV3LQ6ZN32 361 aa13.76□□□□□ -0.21
CTSB-222ENST00000531551 S4R3C0 116 aa13.76□□□□□ -0.21
CTSB-222ENST00000531551 FXYD6-FXYD2A0A087WZ82 144 aa13.75□□□□□ -0.21
CTSB-222ENST00000531551 IGHV3-48P01763 117 aa13.75□□□□□ -0.21
CTSB-222ENST00000531551 LYRM2Q9NU23 88 aaPredicted RBP13.75□□□□□ -0.21
CTSB-222ENST00000531551 TRBV9A0A0B4J1U6 114 aa13.74□□□□□ -0.21
CTSB-222ENST00000531551 P2RY1P47900 373 aa13.74□□□□□ -0.21
CTSB-222ENST00000531551 C15orf32Q32M92 178 aa13.74□□□□□ -0.21
CTSB-222ENST00000531551 TCTEX1D4Q5JR98 221 aa13.74□□□□□ -0.21
CTSB-222ENST00000531551 NECAP1Q8NC96 275 aa13.74□□□□□ -0.21
CTSB-222ENST00000531551 WIPF2Q8TF74 440 aaPredicted RBP13.74□□□□□ -0.21
CTSB-222ENST00000531551 ATRQ13535 2644 aa13.74□□□□□ -0.21
CTSB-222ENST00000531551 TCRBV4S1A1TA0A5B7 111 aa13.74□□□□□ -0.21
CTSB-222ENST00000531551 CORTO00230 105 aa13.74□□□□□ -0.21
CTSB-222ENST00000531551 CST7O76096 145 aa13.74□□□□□ -0.21
CTSB-222ENST00000531551 MT-CO2P00403 227 aa13.74□□□□□ -0.21
CTSB-222ENST00000531551 IGHV3-11P01762 117 aa13.74□□□□□ -0.21
CTSB-222ENST00000531551 IGHV3-23P01764 117 aa13.74□□□□□ -0.21
CTSB-222ENST00000531551 ATP5IP56385 69 aaPredicted RBP13.74□□□□□ -0.21
CTSB-222ENST00000531551 ATP5G2Q06055 141 aa13.74□□□□□ -0.21
CTSB-222ENST00000531551 CD300CQ08708 224 aa13.74□□□□□ -0.21
CTSB-222ENST00000531551 MLANAQ16655 118 aa13.74□□□□□ -0.21
CTSB-222ENST00000531551 TMEM14EPQ6UXP3 125 aa13.74□□□□□ -0.21
CTSB-222ENST00000531551 TMEM252Q8N6L7 170 aa13.74□□□□□ -0.21
CTSB-222ENST00000531551 OR5B12Q96R08 314 aa13.74□□□□□ -0.21
CTSB-222ENST00000531551 ZC4H2Q9NQZ6 224 aa13.74□□□□□ -0.21
CTSB-222ENST00000531551 IGSF23A1L1A6 192 aa13.73□□□□□ -0.21
CTSB-222ENST00000531551 FAM223BA6NKX1 122 aa13.73□□□□□ -0.21
CTSB-222ENST00000531551 G3V3Q6 166 aa13.73□□□□□ -0.21
CTSB-222ENST00000531551 KRTAP10-3P60369 221 aa13.73□□□□□ -0.21
CTSB-222ENST00000531551 FAM223AQ8IWN6 122 aa13.73□□□□□ -0.21
CTSB-222ENST00000531551 TMEM217Q8N7C4 229 aa13.73□□□□□ -0.21
CTSB-222ENST00000531551 RNASEH2CQ8TDP1 164 aaKnown RBP13.73□□□□□ -0.21
CTSB-222ENST00000531551 WFDC12Q8WWY7 111 aa13.73□□□□□ -0.21
CTSB-222ENST00000531551 A0A0G2JLM5 398 aa13.72□□□□□ -0.21
CTSB-222ENST00000531551 MFSD2BA6NFX1 497 aa13.72□□□□□ -0.21
CTSB-222ENST00000531551 PFDN1O60925 122 aa13.72□□□□□ -0.21
CTSB-222ENST00000531551 BRI3O95415 125 aa13.72□□□□□ -0.21
CTSB-222ENST00000531551 EXOSC2Q13868 293 aaKnown RBP13.72□□□□□ -0.21
CTSB-222ENST00000531551 ZNF546Q86UE3 836 aa13.72□□□□□ -0.21
CTSB-222ENST00000531551 STX12Q86Y82 276 aa13.72□□□□□ -0.21
CTSB-222ENST00000531551 UBAC2Q8NBM4 344 aa13.72□□□□□ -0.21
CTSB-222ENST00000531551 CITED2Q99967 270 aaPredicted RBP13.72□□□□□ -0.21
CTSB-222ENST00000531551 SLC25A31Q9H0C2 315 aa13.72□□□□□ -0.21
CTSB-222ENST00000531551 A0A1W2PRX2 142 aa13.72□□□□□ -0.21
CTSB-222ENST00000531551 K7EIM0 57 aa13.72□□□□□ -0.21
CTSB-222ENST00000531551 SLC25A4P12235 298 aa13.72□□□□□ -0.21
CTSB-222ENST00000531551 LYL1P12980 280 aa13.72□□□□□ -0.21
CTSB-222ENST00000531551 RPL12P30050 165 aaKnown RBP13.72□□□□□ -0.21
CTSB-222ENST00000531551 NUP62P37198 522 aaPredicted RBP13.72□□□□□ -0.21
CTSB-222ENST00000531551 PVRIGQ6DKI7 326 aa13.72□□□□□ -0.21
CTSB-222ENST00000531551 TCTE3Q8IZS6 198 aa13.72□□□□□ -0.21
CTSB-222ENST00000531551 OR10P1Q8NGE3 313 aa13.72□□□□□ -0.21
CTSB-222ENST00000531551 SCARB1Q8WTV0 552 aa13.72□□□□□ -0.21
CTSB-222ENST00000531551 USMG5Q96IX5 58 aa13.72□□□□□ -0.21
CTSB-222ENST00000531551 I3L2K1 104 aa13.71□□□□□ -0.21
CTSB-222ENST00000531551 EWSR1Q01844 656 aaKnown RBP eCLIP13.71□□□□□ -0.21
CTSB-222ENST00000531551 NHLH2Q02577 135 aa13.71□□□□□ -0.21
CTSB-222ENST00000531551 C12orf54Q6X4T0 127 aa13.71□□□□□ -0.21
CTSB-222ENST00000531551 ZNF491Q8N8L2 437 aa13.71□□□□□ -0.21
CTSB-222ENST00000531551 RNF152Q8N8N0 203 aa13.71□□□□□ -0.21
CTSB-222ENST00000531551 NEURL2Q9BR09 285 aa13.71□□□□□ -0.21
CTSB-222ENST00000531551 FNDC4Q9H6D8 234 aaPredicted RBP13.71□□□□□ -0.21
CTSB-222ENST00000531551 RPS10-NUDT3A0A1W2PQS6 291 aa13.7□□□□□ -0.22
CTSB-222ENST00000531551 ARPC5O15511 151 aa13.7□□□□□ -0.22
CTSB-222ENST00000531551 SULT1A1P50225 295 aa13.7□□□□□ -0.22
CTSB-222ENST00000531551 AP2S1P53680 142 aaPredicted RBP13.7□□□□□ -0.22
CTSB-222ENST00000531551 RIPPLY3P57055 190 aa13.7□□□□□ -0.22
CTSB-222ENST00000531551 CD69Q07108 199 aa13.7□□□□□ -0.22
CTSB-222ENST00000531551 ARL16Q0P5N6 197 aa13.7□□□□□ -0.22
CTSB-222ENST00000531551 KIAA0141Q14154 515 aaPredicted RBP13.7□□□□□ -0.22
CTSB-222ENST00000531551 ACSM6Q6P461 480 aa13.7□□□□□ -0.22
CTSB-222ENST00000531551 INO80EQ8NBZ0 244 aaPredicted RBP13.7□□□□□ -0.22
CTSB-222ENST00000531551 EEF1AKMT3Q96AZ1 226 aa13.7□□□□□ -0.22
CTSB-222ENST00000531551 CXorf58Q96LI9 332 aa13.7□□□□□ -0.22
CTSB-222ENST00000531551 GNB4Q9HAV0 340 aa13.7□□□□□ -0.22
CTSB-222ENST00000531551 PMS2P5A8MQ11 134 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms