RNA–Protein interactions for RNA: ENST00000531385.1

PTPRU-211, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-211ENST00000531385 ZNF114Q8NC26 417 aa14.16□□□□□ -0.14
PTPRU-211ENST00000531385 PDCD10Q9BUL8 212 aa14.16□□□□□ -0.14
PTPRU-211ENST00000531385 CACNG5Q9UF02 275 aa14.16□□□□□ -0.14
PTPRU-211ENST00000531385 MLXQ9UH92 298 aa14.16□□□□□ -0.14
PTPRU-211ENST00000531385 A8MWP6 167 aa14.15□□□□□ -0.14
PTPRU-211ENST00000531385 FAUP35544 74 aaKnown RBP14.15□□□□□ -0.14
PTPRU-211ENST00000531385 AP3S2P59780 193 aa14.15□□□□□ -0.14
PTPRU-211ENST00000531385 ZNF57Q68EA5 555 aaPredicted RBP14.15□□□□□ -0.14
PTPRU-211ENST00000531385 BTNL8Q6UX41 500 aa14.15□□□□□ -0.14
PTPRU-211ENST00000531385 UXS1Q8NBZ7 420 aa14.15□□□□□ -0.14
PTPRU-211ENST00000531385 OR1L6Q8NGR2 347 aa14.15□□□□□ -0.14
PTPRU-211ENST00000531385 WDR89Q96FK6 387 aaPredicted RBP14.15□□□□□ -0.14
PTPRU-211ENST00000531385 BSCL2Q96G97 398 aaPredicted RBP14.15□□□□□ -0.14
PTPRU-211ENST00000531385 ZNF414Q96IQ9 312 aa14.15□□□□□ -0.14
PTPRU-211ENST00000531385 ZNF436Q9C0F3 470 aaPredicted RBP14.15□□□□□ -0.14
PTPRU-211ENST00000531385 ZNF207O43670 478 aaKnown RBP14.14□□□□□ -0.15
PTPRU-211ENST00000531385 RNASE2P10153 161 aaKnown RBP14.14□□□□□ -0.15
PTPRU-211ENST00000531385 BAK1Q16611 211 aa14.14□□□□□ -0.15
PTPRU-211ENST00000531385 GUCA2BQ16661 112 aa14.14□□□□□ -0.15
PTPRU-211ENST00000531385 TMEM190Q8WZ59 177 aa14.14□□□□□ -0.15
PTPRU-211ENST00000531385 TMEM56-RWDD3S4R434 201 aa14.14□□□□□ -0.15
PTPRU-211ENST00000531385 ZNF785A8K8V0 405 aa14.13□□□□□ -0.15
PTPRU-211ENST00000531385 FAM219AQ8IW50 185 aa14.13□□□□□ -0.15
PTPRU-211ENST00000531385 TMEM61Q8N0U2 210 aa14.13□□□□□ -0.15
PTPRU-211ENST00000531385 GALNT14Q96FL9 552 aa14.13□□□□□ -0.15
PTPRU-211ENST00000531385 SCGB3A2Q96PL1 93 aa14.13□□□□□ -0.15
PTPRU-211ENST00000531385 SDHCQ99643 169 aaPredicted RBP14.13□□□□□ -0.15
PTPRU-211ENST00000531385 C20orf24Q9BUV8 137 aa14.13□□□□□ -0.15
PTPRU-211ENST00000531385 WFDC10AQ9H1F0 79 aa14.13□□□□□ -0.15
PTPRU-211ENST00000531385 LINC00854A0A1B0GVQ3 168 aa14.12□□□□□ -0.15
PTPRU-211ENST00000531385 CD7P09564 240 aa14.12□□□□□ -0.15
PTPRU-211ENST00000531385 SNCAP37840 140 aa14.12□□□□□ -0.15
PTPRU-211ENST00000531385 CD81P60033 236 aa14.12□□□□□ -0.15
PTPRU-211ENST00000531385 LYZL2Q7Z4W2 148 aa14.12□□□□□ -0.15
PTPRU-211ENST00000531385 GTSCR1Q86UQ5 136 aa14.12□□□□□ -0.15
PTPRU-211ENST00000531385 OR2K2Q8NGT1 345 aa14.12□□□□□ -0.15
PTPRU-211ENST00000531385 ENY2Q9NPA8 101 aa14.12□□□□□ -0.15
PTPRU-211ENST00000531385 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.12□□□□□ -0.15
PTPRU-211ENST00000531385 KCNIP3Q9Y2W7 256 aa14.12□□□□□ -0.15
PTPRU-211ENST00000531385 INS-IGF2F8WCM5 200 aa14.11□□□□□ -0.15
PTPRU-211ENST00000531385 SCAF4O95104 1147 aaKnown RBP14.11□□□□□ -0.15
PTPRU-211ENST00000531385 CTSGP08311 255 aa14.11□□□□□ -0.15
PTPRU-211ENST00000531385 CCR6P51684 374 aa14.11□□□□□ -0.15
PTPRU-211ENST00000531385 MFAP4P55083 255 aa14.11□□□□□ -0.15
PTPRU-211ENST00000531385 SPCS3P61009 180 aa14.11□□□□□ -0.15
PTPRU-211ENST00000531385 AARDQ4LEZ3 155 aa14.11□□□□□ -0.15
PTPRU-211ENST00000531385 SPSB3Q6PJ21 355 aa14.11□□□□□ -0.15
PTPRU-211ENST00000531385 PALMDQ9NP74 551 aa14.11□□□□□ -0.15
PTPRU-211ENST00000531385 TECRQ9NZ01 308 aaKnown RBP14.11□□□□□ -0.15
PTPRU-211ENST00000531385 MRPL36Q9P0J6 103 aaKnown RBP14.11□□□□□ -0.15
PTPRU-211ENST00000531385 UFC1Q9Y3C8 167 aa14.11□□□□□ -0.15
PTPRU-211ENST00000531385 U3KQK5 164 aa14.11□□□□□ -0.15
PTPRU-211ENST00000531385 NDUFA4O00483 81 aa14.1□□□□□ -0.15
PTPRU-211ENST00000531385 NHLRC4P0CG21 123 aaPredicted RBP14.1□□□□□ -0.15
PTPRU-211ENST00000531385 MLANAQ16655 118 aa14.1□□□□□ -0.15
PTPRU-211ENST00000531385 TRIQKQ629K1 86 aa14.1□□□□□ -0.15
PTPRU-211ENST00000531385 IL22RA2Q969J5 263 aa14.1□□□□□ -0.15
PTPRU-211ENST00000531385 NEURL2Q9BR09 285 aa14.1□□□□□ -0.15
PTPRU-211ENST00000531385 C19orf73Q9NVV2 129 aa14.1□□□□□ -0.15
PTPRU-211ENST00000531385 CEBPZOSA8MTT3 80 aa14.09□□□□□ -0.15
PTPRU-211ENST00000531385 NUPL2O15504 423 aaKnown RBP14.09□□□□□ -0.15
PTPRU-211ENST00000531385 C8orf88P0DMB2 117 aa14.09□□□□□ -0.15
PTPRU-211ENST00000531385 SULT1A3P0DMM9 295 aa14.09□□□□□ -0.15
PTPRU-211ENST00000531385 SULT1A4P0DMN0 295 aa14.09□□□□□ -0.15
PTPRU-211ENST00000531385 VAMP1P23763 118 aa14.09□□□□□ -0.15
PTPRU-211ENST00000531385 INPP1P49441 399 aa14.09□□□□□ -0.15
PTPRU-211ENST00000531385 ANKRD55Q3KP44 614 aa14.09□□□□□ -0.15
PTPRU-211ENST00000531385 NMSQ5H8A3 153 aa14.09□□□□□ -0.15
PTPRU-211ENST00000531385 PVRIGQ6DKI7 326 aa14.09□□□□□ -0.15
PTPRU-211ENST00000531385 ATP6V0BQ99437 205 aa14.09□□□□□ -0.15
PTPRU-211ENST00000531385 FNDC4Q9H6D8 234 aaPredicted RBP14.09□□□□□ -0.15
PTPRU-211ENST00000531385 IGHV3-49A0A0A0MS15 119 aa14.08□□□□□ -0.16
PTPRU-211ENST00000531385 GNG7O60262 68 aa14.08□□□□□ -0.16
PTPRU-211ENST00000531385 YIF1AO95070 293 aa14.08□□□□□ -0.16
PTPRU-211ENST00000531385 ANXA3P12429 323 aa14.08□□□□□ -0.16
PTPRU-211ENST00000531385 ELLP55199 621 aaPredicted RBP14.08□□□□□ -0.16
PTPRU-211ENST00000531385 PPP1R1AQ13522 171 aa14.08□□□□□ -0.16
PTPRU-211ENST00000531385 BSXQ3C1V8 233 aa14.08□□□□□ -0.16
PTPRU-211ENST00000531385 LGI3Q8N145 548 aa14.08□□□□□ -0.16
PTPRU-211ENST00000531385 DEFB125Q8N687 156 aa14.08□□□□□ -0.16
PTPRU-211ENST00000531385 OR52E5Q8NH55 327 aa14.08□□□□□ -0.16
PTPRU-211ENST00000531385 HEYLQ9NQ87 328 aaPredicted RBP14.08□□□□□ -0.16
PTPRU-211ENST00000531385 DAZ1Q9NQZ3 744 aaKnown RBP14.08□□□□□ -0.16
PTPRU-211ENST00000531385 NDUFA13Q9P0J0 144 aa14.08□□□□□ -0.16
PTPRU-211ENST00000531385 TENM3Q9P273 2699 aa14.08□□□□□ -0.16
PTPRU-211ENST00000531385 A0A0B4J2A0 478 aa14.07□□□□□ -0.16
PTPRU-211ENST00000531385 FCGR2BP31994 310 aaPredicted RBP14.07□□□□□ -0.16
PTPRU-211ENST00000531385 OPRK1P41145 380 aa14.07□□□□□ -0.16
PTPRU-211ENST00000531385 SUB1P53999 127 aaKnown RBP eCLIP14.07□□□□□ -0.16
PTPRU-211ENST00000531385 TMEM128Q5BJH2 165 aa14.07□□□□□ -0.16
PTPRU-211ENST00000531385 TMEM170AQ8WVE7 144 aa14.07□□□□□ -0.16
PTPRU-211ENST00000531385 MARC2Q969Z3 335 aa14.07□□□□□ -0.16
PTPRU-211ENST00000531385 TXN2Q99757 166 aa14.07□□□□□ -0.16
PTPRU-211ENST00000531385 SLC25A21Q9BQT8 299 aaPredicted RBP14.07□□□□□ -0.16
PTPRU-211ENST00000531385 TUBA4BQ9H853 241 aa14.07□□□□□ -0.16
PTPRU-211ENST00000531385 MRPL27Q9P0M9 148 aaKnown RBP14.07□□□□□ -0.16
PTPRU-211ENST00000531385 SHPKQ9UHJ6 478 aa14.07□□□□□ -0.16
PTPRU-211ENST00000531385 FLVCR2Q9UPI3 526 aa14.07□□□□□ -0.16
PTPRU-211ENST00000531385 STAB2Q8WWQ8 2551 aa14.07□□□□□ -0.16
PTPRU-211ENST00000531385 RELQ04864 619 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms