RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 LRP2P98164 4655 aa5.75□□□□□ -1.49
CD44-232ENST00000531118 KRTAP4-8A0A0G2JLE6 195 aa5.74□□□□□ -1.49
CD44-232ENST00000531118 ZNF705FA8MVS1 300 aaPredicted RBP5.74□□□□□ -1.49
CD44-232ENST00000531118 J3QRK9 145 aa5.74□□□□□ -1.49
CD44-232ENST00000531118 MYL12BO14950 172 aa5.74□□□□□ -1.49
CD44-232ENST00000531118 HRASP01112 189 aa5.74□□□□□ -1.49
CD44-232ENST00000531118 IGLV2-14P01704 120 aa5.74□□□□□ -1.49
CD44-232ENST00000531118 APOHP02749 345 aaPredicted RBP5.74□□□□□ -1.49
CD44-232ENST00000531118 ZNF705DP0CH99 300 aaPredicted RBP5.74□□□□□ -1.49
CD44-232ENST00000531118 ZNF705BP0CI00 300 aaPredicted RBP5.74□□□□□ -1.49
CD44-232ENST00000531118 BRWD1-AS2P59051 145 aa5.74□□□□□ -1.49
CD44-232ENST00000531118 DLK1P80370 383 aa5.74□□□□□ -1.49
CD44-232ENST00000531118 MRPS15P82914 257 aaKnown RBP5.74□□□□□ -1.49
CD44-232ENST00000531118 WT1-ASQ06250 92 aa5.74□□□□□ -1.49
CD44-232ENST00000531118 ST3GAL4Q11206 333 aa5.74□□□□□ -1.49
CD44-232ENST00000531118 EIF4EBP1Q13541 118 aaPredicted RBP5.74□□□□□ -1.49
CD44-232ENST00000531118 ICAM4Q14773 271 aa5.74□□□□□ -1.49
CD44-232ENST00000531118 SSX1Q16384 188 aa5.74□□□□□ -1.49
CD44-232ENST00000531118 SMN1Q16637 294 aaKnown RBP5.74□□□□□ -1.49
CD44-232ENST00000531118 PLAC9Q5JTB6 97 aa5.74□□□□□ -1.49
CD44-232ENST00000531118 THOC7Q6I9Y2 204 aaKnown RBP5.74□□□□□ -1.49
CD44-232ENST00000531118 LRRTM1Q86UE6 522 aa5.74□□□□□ -1.49
CD44-232ENST00000531118 DUSP18Q8NEJ0 188 aa5.74□□□□□ -1.49
CD44-232ENST00000531118 OR10W1Q8NGF6 305 aa5.74□□□□□ -1.49
CD44-232ENST00000531118 GPHA2Q96T91 129 aa5.74□□□□□ -1.49
CD44-232ENST00000531118 HRASLSQ9HDD0 168 aa5.74□□□□□ -1.49
CD44-232ENST00000531118 SCN3BQ9NY72 215 aa5.74□□□□□ -1.49
CD44-232ENST00000531118 LINC00588Q9Y4M8 146 aa5.74□□□□□ -1.49
CD44-232ENST00000531118 F11RQ9Y624 299 aaKnown RBP5.74□□□□□ -1.49
CD44-232ENST00000531118 RFNGQ9Y644 331 aa5.74□□□□□ -1.49
CD44-232ENST00000531118 TRAV3A0A0B4J244 114 aa5.73□□□□□ -1.49
CD44-232ENST00000531118 IGKV1D-13A0A0B4J2D9 117 aa5.73□□□□□ -1.49
CD44-232ENST00000531118 KRTAP9-7A8MTY7 169 aa5.73□□□□□ -1.49
CD44-232ENST00000531118 ANKRD65E5RJM6 399 aa5.73□□□□□ -1.49
CD44-232ENST00000531118 SERPINE2P07093 398 aa5.73□□□□□ -1.49
CD44-232ENST00000531118 OR13C7P0DN81 318 aa5.73□□□□□ -1.49
CD44-232ENST00000531118 IGKV1-13P0DP09 117 aa5.73□□□□□ -1.49
CD44-232ENST00000531118 GNB3P16520 340 aa5.73□□□□□ -1.49
CD44-232ENST00000531118 KRTAP10-1P60331 282 aa5.73□□□□□ -1.49
CD44-232ENST00000531118 DAD1P61803 113 aa5.73□□□□□ -1.49
CD44-232ENST00000531118 HAMPP81172 84 aa5.73□□□□□ -1.49
CD44-232ENST00000531118 P2RY14Q15391 338 aa5.73□□□□□ -1.49
CD44-232ENST00000531118 ZNF485Q8NCK3 441 aa5.73□□□□□ -1.49
CD44-232ENST00000531118 BPIFB6Q8NFQ5 453 aa5.73□□□□□ -1.49
CD44-232ENST00000531118 HSD17B10Q99714 261 aaKnown RBP5.73□□□□□ -1.49
CD44-232ENST00000531118 COMMD5Q9GZQ3 224 aa5.73□□□□□ -1.49
CD44-232ENST00000531118 NXF2Q9GZY0 626 aaKnown RBP5.73□□□□□ -1.49
CD44-232ENST00000531118 Q9H3A6 140 aa5.73□□□□□ -1.49
CD44-232ENST00000531118 PLCXD1Q9NUJ7 323 aa5.73□□□□□ -1.49
CD44-232ENST00000531118 CLEC2DQ9UHP7 191 aa5.73□□□□□ -1.49
CD44-232ENST00000531118 SPATA2Q9UM82 520 aa5.73□□□□□ -1.49
CD44-232ENST00000531118 IGKV1D-8A0A087WSZ0 117 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 RPS10-NUDT3A0A1W2PQS6 291 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 SMIM9A6NGZ8 99 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 UPK2O00526 184 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 NUDT3O95989 172 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 HSPA13P48723 471 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 CCL18P55774 89 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 WNT4P56705 351 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 NUTF2P61970 127 aaKnown RBP5.72□□□□□ -1.49
CD44-232ENST00000531118 INSL4Q14641 139 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 PSMG4Q5JS54 123 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 TOR2AQ5JU69 321 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 AHSA2Q719I0 299 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 HSD17B13Q7Z5P4 300 aaPredicted RBP5.72□□□□□ -1.49
CD44-232ENST00000531118 OR56B1Q8NGI3 324 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 DCANP1Q8TF63 244 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 LSM10Q969L4 123 aaKnown RBP5.72□□□□□ -1.49
CD44-232ENST00000531118 C8orf49Q96NF6 230 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 MND1Q9BWT6 205 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 TMEM231Q9H6L2 316 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 TMEM140Q9NV12 185 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 TAS2R8Q9NYW2 309 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 PSORS1C1Q9UIG5 152 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 KCNK7Q9Y2U2 307 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 TPRKBQ9Y3C4 175 aa5.72□□□□□ -1.49
CD44-232ENST00000531118 YTHDF2Q9Y5A9 579 aaKnown RBP5.72□□□□□ -1.49
CD44-232ENST00000531118 PUS1Q9Y606 427 aaKnown RBP eCLIP5.72□□□□□ -1.49
CD44-232ENST00000531118 hCG_2014768A0A024R1R8 64 aa5.71□□□□□ -1.5
CD44-232ENST00000531118 IGHV3OR16-12A0A075B7B8 117 aa5.71□□□□□ -1.5
CD44-232ENST00000531118 ERICH4A6NGS2 130 aa5.71□□□□□ -1.5
CD44-232ENST00000531118 PTGES3LE9PB15 166 aa5.71□□□□□ -1.5
CD44-232ENST00000531118 MFNGO00587 321 aa5.71□□□□□ -1.5
CD44-232ENST00000531118 TMEM127O75204 238 aa5.71□□□□□ -1.5
CD44-232ENST00000531118 SLC22A5O76082 557 aa5.71□□□□□ -1.5
CD44-232ENST00000531118 HLA-DQB1P01920 261 aa5.71□□□□□ -1.5
CD44-232ENST00000531118 CD1AP06126 327 aa5.71□□□□□ -1.5
CD44-232ENST00000531118 FGF2P09038 288 aa5.71□□□□□ -1.5
CD44-232ENST00000531118 GNAO1P09471 354 aa5.71□□□□□ -1.5
CD44-232ENST00000531118 TRAPPC2P0DI81 140 aa5.71□□□□□ -1.5
CD44-232ENST00000531118 TRAPPC2BP0DI82 140 aa5.71□□□□□ -1.5
CD44-232ENST00000531118 GYPEP15421 78 aa5.71□□□□□ -1.5
CD44-232ENST00000531118 GNRHRP30968 328 aa5.71□□□□□ -1.5
CD44-232ENST00000531118 ALDH3B2P48448 385 aa5.71□□□□□ -1.5
CD44-232ENST00000531118 POU2AF1Q16633 256 aa5.71□□□□□ -1.5
CD44-232ENST00000531118 TOMM20LQ6UXN7 152 aa5.71□□□□□ -1.5
CD44-232ENST00000531118 GSG1LQ6UXU4 331 aa5.71□□□□□ -1.5
CD44-232ENST00000531118 Q6ZRN7 208 aaPredicted RBP5.71□□□□□ -1.5
CD44-232ENST00000531118 PHYHIPQ92561 330 aa5.71□□□□□ -1.5
CD44-232ENST00000531118 RAB40CQ96S21 281 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms