RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 IZUMO4Q1ZYL8 232 aa15.22■□□□□ 0.03
TSPAN4-219ENST00000530404 FAM90A2PQ658T7 463 aa15.22■□□□□ 0.03
TSPAN4-219ENST00000530404 TCF24Q7RTU0 167 aa15.22■□□□□ 0.03
TSPAN4-219ENST00000530404 H2BFWTQ7Z2G1 175 aa15.22■□□□□ 0.03
TSPAN4-219ENST00000530404 ST8SIA2Q92186 375 aa15.22■□□□□ 0.03
TSPAN4-219ENST00000530404 FBXL17Q9UF56 701 aa15.22■□□□□ 0.03
TSPAN4-219ENST00000530404 DEFB4AO15263 64 aa15.21■□□□□ 0.03
TSPAN4-219ENST00000530404 GNG7O60262 68 aa15.21■□□□□ 0.03
TSPAN4-219ENST00000530404 PRCDQ00LT1 54 aa15.21■□□□□ 0.03
TSPAN4-219ENST00000530404 KCTD21Q4G0X4 260 aa15.21■□□□□ 0.03
TSPAN4-219ENST00000530404 LILRB2Q8N423 598 aa15.21■□□□□ 0.03
TSPAN4-219ENST00000530404 OR11H2Q8NH07 326 aa15.21■□□□□ 0.03
TSPAN4-219ENST00000530404 GPX8Q8TED1 209 aa15.21■□□□□ 0.03
TSPAN4-219ENST00000530404 YIPF6Q96EC8 236 aa15.21■□□□□ 0.03
TSPAN4-219ENST00000530404 CMTM3Q96MX0 182 aa15.21■□□□□ 0.03
TSPAN4-219ENST00000530404 LEMD1Q68G75 181 aa15.2■□□□□ 0.02
TSPAN4-219ENST00000530404 SNX29P2Q8IUI4 249 aa15.2■□□□□ 0.02
TSPAN4-219ENST00000530404 ZNF114Q8NC26 417 aa15.2■□□□□ 0.02
TSPAN4-219ENST00000530404 GATAD1Q8WUU5 269 aa15.2■□□□□ 0.02
TSPAN4-219ENST00000530404 TXN2Q99757 166 aa15.2■□□□□ 0.02
TSPAN4-219ENST00000530404 KRTAP17-1Q9BYP8 105 aa15.2■□□□□ 0.02
TSPAN4-219ENST00000530404 ST8SIA3O43173 380 aa15.19■□□□□ 0.02
TSPAN4-219ENST00000530404 CA1P00915 261 aaPredicted RBP15.19■□□□□ 0.02
TSPAN4-219ENST00000530404 S100GP29377 79 aa15.19■□□□□ 0.02
TSPAN4-219ENST00000530404 LPCAT3Q6P1A2 487 aa15.19■□□□□ 0.02
TSPAN4-219ENST00000530404 TOMM20LQ6UXN7 152 aa15.19■□□□□ 0.02
TSPAN4-219ENST00000530404 FAM24BQ8N5W8 94 aa15.19■□□□□ 0.02
TSPAN4-219ENST00000530404 FAM212BQ9NTI7 297 aaPredicted RBP15.19■□□□□ 0.02
TSPAN4-219ENST00000530404 COMMD3Q9UBI1 195 aa15.19■□□□□ 0.02
TSPAN4-219ENST00000530404 CMC4P56277 68 aaPredicted RBP15.18■□□□□ 0.02
TSPAN4-219ENST00000530404 HSPE1P61604 102 aaKnown RBP15.18■□□□□ 0.02
TSPAN4-219ENST00000530404 ERHP84090 104 aaKnown RBP15.18■□□□□ 0.02
TSPAN4-219ENST00000530404 RNASE12Q5GAN4 147 aaKnown RBP15.18■□□□□ 0.02
TSPAN4-219ENST00000530404 LGALS9CQ6DKI2 356 aa15.18■□□□□ 0.02
TSPAN4-219ENST00000530404 C11orf45Q8TAV5 145 aa15.18■□□□□ 0.02
TSPAN4-219ENST00000530404 M0QYG6 137 aa15.17■□□□□ 0.02
TSPAN4-219ENST00000530404 DFFBO76075 338 aa15.17■□□□□ 0.02
TSPAN4-219ENST00000530404 DEFB131AP59861 70 aa15.17■□□□□ 0.02
TSPAN4-219ENST00000530404 RBMS2Q15434 407 aaKnown RBP15.17■□□□□ 0.02
TSPAN4-219ENST00000530404 GINS3Q9BRX5 216 aa15.17■□□□□ 0.02
TSPAN4-219ENST00000530404 MS4A6AQ9H2W1 248 aa15.17■□□□□ 0.02
TSPAN4-219ENST00000530404 ZFAND3Q9H8U3 227 aa15.17■□□□□ 0.02
TSPAN4-219ENST00000530404 PUS1Q9Y606 427 aaKnown RBP eCLIP15.17■□□□□ 0.02
TSPAN4-219ENST00000530404 DNASE2O00115 360 aaPredicted RBP15.16■□□□□ 0.02
TSPAN4-219ENST00000530404 PI3P19957 117 aa15.16■□□□□ 0.02
TSPAN4-219ENST00000530404 RPL11P62913 178 aaKnown RBP15.16■□□□□ 0.02
TSPAN4-219ENST00000530404 PAFAH1B2P68402 229 aa15.16■□□□□ 0.02
TSPAN4-219ENST00000530404 C11orf68Q9H3H3 251 aaKnown RBP15.16■□□□□ 0.02
TSPAN4-219ENST00000530404 VSIRQ9H7M9 311 aa15.16■□□□□ 0.02
TSPAN4-219ENST00000530404 A0A1B0GU03 582 aa15.15■□□□□ 0.02
TSPAN4-219ENST00000530404 IGKV1-5P01602 117 aa15.15■□□□□ 0.02
TSPAN4-219ENST00000530404 RCVRNP35243 200 aa15.15■□□□□ 0.02
TSPAN4-219ENST00000530404 UCP3P55916 312 aa15.15■□□□□ 0.02
TSPAN4-219ENST00000530404 DUSP18Q8NEJ0 188 aa15.15■□□□□ 0.02
TSPAN4-219ENST00000530404 SMIM31A0A1B0GVY4 71 aa15.14■□□□□ 0.01
TSPAN4-219ENST00000530404 PGAM2P15259 253 aa15.14■□□□□ 0.01
TSPAN4-219ENST00000530404 NPBWR1P48145 328 aa15.14■□□□□ 0.01
TSPAN4-219ENST00000530404 NCS1P62166 190 aa15.14■□□□□ 0.01
TSPAN4-219ENST00000530404 PRR20EP86478 221 aa15.14■□□□□ 0.01
TSPAN4-219ENST00000530404 PRR20CP86479 221 aa15.14■□□□□ 0.01
TSPAN4-219ENST00000530404 PRR20DP86480 221 aa15.14■□□□□ 0.01
TSPAN4-219ENST00000530404 PRR20BP86481 221 aa15.14■□□□□ 0.01
TSPAN4-219ENST00000530404 PRR20AP86496 221 aa15.14■□□□□ 0.01
TSPAN4-219ENST00000530404 TMEM187Q14656 261 aa15.14■□□□□ 0.01
TSPAN4-219ENST00000530404 ZNF600Q6ZNG1 722 aa15.14■□□□□ 0.01
TSPAN4-219ENST00000530404 SLC35G3Q8N808 338 aa15.14■□□□□ 0.01
TSPAN4-219ENST00000530404 TP53RKQ96S44 253 aa15.14■□□□□ 0.01
TSPAN4-219ENST00000530404 MFFQ9GZY8 342 aa15.14■□□□□ 0.01
TSPAN4-219ENST00000530404 SCPEP1Q9HB40 452 aa15.14■□□□□ 0.01
TSPAN4-219ENST00000530404 MRPL36Q9P0J6 103 aaKnown RBP15.14■□□□□ 0.01
TSPAN4-219ENST00000530404 RABAC1Q9UI14 185 aa15.14■□□□□ 0.01
TSPAN4-219ENST00000530404 HPGDSO60760 199 aa15.13■□□□□ 0.01
TSPAN4-219ENST00000530404 TMEM50AO95807 157 aa15.13■□□□□ 0.01
TSPAN4-219ENST00000530404 APOA1P02647 267 aa15.13■□□□□ 0.01
TSPAN4-219ENST00000530404 IFNA4P05014 189 aa15.13■□□□□ 0.01
TSPAN4-219ENST00000530404 ELK1P19419 428 aa15.13■□□□□ 0.01
TSPAN4-219ENST00000530404 DNAH2Q9P225 4427 aa15.12■□□□□ 0.01
TSPAN4-219ENST00000530404 A0A0B4J293 547 aa15.12■□□□□ 0.01
TSPAN4-219ENST00000530404 IFNA17P01571 189 aa15.12■□□□□ 0.01
TSPAN4-219ENST00000530404 SNCAP37840 140 aa15.12■□□□□ 0.01
TSPAN4-219ENST00000530404 AKR1C2P52895 323 aa15.12■□□□□ 0.01
TSPAN4-219ENST00000530404 VBP1P61758 197 aa15.12■□□□□ 0.01
TSPAN4-219ENST00000530404 MLANAQ16655 118 aa15.12■□□□□ 0.01
TSPAN4-219ENST00000530404 STHQ8IWL8 128 aa15.12■□□□□ 0.01
TSPAN4-219ENST00000530404 DNAH17Q9UFH2 4485 aa15.11■□□□□ 0.01
TSPAN4-219ENST00000530404 P0C879 139 aa15.11■□□□□ 0.01
TSPAN4-219ENST00000530404 RNASE2P10153 161 aaKnown RBP15.11■□□□□ 0.01
TSPAN4-219ENST00000530404 ETV6P41212 452 aa15.11■□□□□ 0.01
TSPAN4-219ENST00000530404 PPP5CP53041 499 aa15.11■□□□□ 0.01
TSPAN4-219ENST00000530404 PIGPP57054 158 aa15.11■□□□□ 0.01
TSPAN4-219ENST00000530404 C2CD4CQ8TF44 421 aa15.11■□□□□ 0.01
TSPAN4-219ENST00000530404 CD5P06127 495 aa15.1■□□□□ 0.01
TSPAN4-219ENST00000530404 HOXA1P49639 335 aaPredicted RBP15.1■□□□□ 0.01
TSPAN4-219ENST00000530404 RND3P61587 244 aa15.1■□□□□ 0.01
TSPAN4-219ENST00000530404 SP6Q3SY56 376 aa15.1■□□□□ 0.01
TSPAN4-219ENST00000530404 STXBP6Q8NFX7 210 aa15.1■□□□□ 0.01
TSPAN4-219ENST00000530404 FNDC4Q9H6D8 234 aaPredicted RBP15.1■□□□□ 0.01
TSPAN4-219ENST00000530404 VCX3AQ9NNX9 186 aa15.1■□□□□ 0.01
TSPAN4-219ENST00000530404 KLK11Q9UBX7 282 aa15.1■□□□□ 0.01
TSPAN4-219ENST00000530404 FAT2Q9NYQ8 4349 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms