RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 CXCL2P19875 107 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 CXCL3P19876 107 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 BLVRBP30043 206 aaPredicted RBP2.39□□□□□ -2.03
CASP4-208ENST00000530309 SDC4P31431 198 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 RAB4BP61018 213 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 ZNHIT3Q15649 155 aaPredicted RBP2.39□□□□□ -2.03
CASP4-208ENST00000530309 SLC36A2Q495M3 483 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 FAM229BQ4G0N7 80 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 HACD4Q5VWC8 232 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 TMEM91Q6ZNR0 172 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 BOD1L2Q8IYS8 172 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 ZNF675Q8TD23 568 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 ZNF431Q8TF32 576 aaPredicted RBP2.39□□□□□ -2.03
CASP4-208ENST00000530309 MALSU1Q96EH3 234 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 C14orf144Q96I85 54 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 MCEEQ96PE7 176 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 TMEM106BQ9NUM4 274 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 NDUFB11Q9NX14 153 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 SCN3BQ9NY72 215 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 CCDC167Q9P0B6 97 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 SCP2D1Q9UJQ7 156 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 CCL26Q9Y258 94 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 DSPPQ9NZW4 1301 aa2.39□□□□□ -2.03
CASP4-208ENST00000530309 AFDNP55196 1824 aaKnown RBP2.38□□□□□ -2.03
CASP4-208ENST00000530309 YLPM1P49750 1951 aaKnown RBP2.38□□□□□ -2.03
CASP4-208ENST00000530309 ODF3BA8MYP8 253 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 KPNA3O00505 521 aaPredicted RBP2.38□□□□□ -2.03
CASP4-208ENST00000530309 LYRM1O43325 122 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 ORC5O43913 435 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 HPGDSO60760 199 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 ATG12O94817 140 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 IGHV3-30-3P0DP02 117 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 HIST1H1BP16401 226 aaKnown RBP2.38□□□□□ -2.03
CASP4-208ENST00000530309 ORM2P19652 201 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 PPP1CCP36873 323 aaKnown RBP2.38□□□□□ -2.03
CASP4-208ENST00000530309 RPL35P42766 123 aaKnown RBP2.38□□□□□ -2.03
CASP4-208ENST00000530309 SNRPGP62308 76 aaKnown RBP2.38□□□□□ -2.03
CASP4-208ENST00000530309 C1DQ13901 141 aaKnown RBP2.38□□□□□ -2.03
CASP4-208ENST00000530309 TAF1AQ15573 450 aaPredicted RBP2.38□□□□□ -2.03
CASP4-208ENST00000530309 FER1L6Q2WGJ9 1857 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 DEFB115Q30KQ5 88 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 MRPL51Q4U2R6 128 aaKnown RBP2.38□□□□□ -2.03
CASP4-208ENST00000530309 CDKL4Q5MAI5 379 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 FAM9CQ8IZT9 166 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 C10orf111Q8N326 155 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 C12orf45Q8N5I9 185 aaPredicted RBP2.38□□□□□ -2.03
CASP4-208ENST00000530309 TMEM75Q8N9X5 138 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 OR10J5Q8NHC4 309 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 TNFAIP8L1Q8WVP5 186 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 SMIM12Q96EX1 92 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 MGLLQ99685 303 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 UPK3BQ9BT76 320 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 UBQLN4Q9NRR5 601 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 RASL12Q9NYN1 266 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 COPZ2Q9P299 210 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 PSORS1C2Q9UIG4 136 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 MRPS16Q9Y3D3 137 aaKnown RBP2.38□□□□□ -2.03
CASP4-208ENST00000530309 CACNA1GO43497 2377 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 LTBP2Q14767 1821 aa2.38□□□□□ -2.03
CASP4-208ENST00000530309 MYH3P11055 1940 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 LTN1O94822 1766 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 A0A1W2PQL4 384 aaPredicted RBP2.37□□□□□ -2.03
CASP4-208ENST00000530309 TMEM218A2RU14 115 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 ARRDC5A6NEK1 342 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 FABP12A6NFH5 140 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 AZIN1O14977 448 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 GSTZ1O43708 216 aaPredicted RBP2.37□□□□□ -2.03
CASP4-208ENST00000530309 SOD1P00441 154 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 IFNA10P01566 189 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 IL5P05113 134 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 ADCYAP1P18509 176 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 DYNLT1P63172 113 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 ZNF117Q03924 483 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 MLLT11Q13015 90 aaPredicted RBP2.37□□□□□ -2.03
CASP4-208ENST00000530309 NCBP2-AS2Q69YL0 99 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 C3orf33Q6P1S2 294 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 TAC4Q86UU9 113 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 STX12Q86Y82 276 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 STX19Q8N4C7 294 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 TBC1D19Q8N5T2 526 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 OR5B17Q8NGF7 314 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 CMSS1Q9BQ75 279 aaKnown RBP2.37□□□□□ -2.03
CASP4-208ENST00000530309 C7orf50Q9BRJ6 194 aaKnown RBP2.37□□□□□ -2.03
CASP4-208ENST00000530309 TCEAL7Q9BRU2 100 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 MND1Q9BWT6 205 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 NKX6-2Q9C056 277 aaPredicted RBP2.37□□□□□ -2.03
CASP4-208ENST00000530309 SMDT1Q9H4I9 107 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 NIT2Q9NQR4 276 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 CISHQ9NSE2 258 aa2.37□□□□□ -2.03
CASP4-208ENST00000530309 TXNL4BQ9NX01 149 aaKnown RBP2.37□□□□□ -2.03
CASP4-208ENST00000530309 SBF2Q86WG5 1849 aa2.36□□□□□ -2.03
CASP4-208ENST00000530309 A0A087WUJ7 227 aa2.36□□□□□ -2.03
CASP4-208ENST00000530309 A0A1B0GV90 55 aa2.36□□□□□ -2.03
CASP4-208ENST00000530309 LOC285095A0A1B0GVY8 99 aa2.36□□□□□ -2.03
CASP4-208ENST00000530309 TRDV1A0A1B0GX56 115 aa2.36□□□□□ -2.03
CASP4-208ENST00000530309 TMEM213A2RRL7 107 aa2.36□□□□□ -2.03
CASP4-208ENST00000530309 C2orf74A8MZ97 194 aa2.36□□□□□ -2.03
CASP4-208ENST00000530309 J3QKU1 62 aa2.36□□□□□ -2.03
CASP4-208ENST00000530309 M0R233 179 aa2.36□□□□□ -2.03
CASP4-208ENST00000530309 CXCR6O00574 342 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms