RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 LYNX1P0DP58 116 aa8.23□□□□□ -1.09
CCDC90B-214ENST00000529689 GNB2P62879 340 aa8.23□□□□□ -1.09
CCDC90B-214ENST00000529689 TMEM14EPQ6UXP3 125 aa8.23□□□□□ -1.09
CCDC90B-214ENST00000529689 OR4F17Q8NGA8 305 aa8.23□□□□□ -1.09
CCDC90B-214ENST00000529689 SNRNP40Q96DI7 357 aaKnown RBP8.23□□□□□ -1.09
CCDC90B-214ENST00000529689 TIMD4Q96H15 378 aa8.23□□□□□ -1.09
CCDC90B-214ENST00000529689 CHD3Q12873 2000 aaKnown RBP8.23□□□□□ -1.09
CCDC90B-214ENST00000529689 IGHV3OR16-13A0A075B7E8 117 aa8.23□□□□□ -1.09
CCDC90B-214ENST00000529689 IGHV3-74A0A0B4J1X5 117 aa8.23□□□□□ -1.09
CCDC90B-214ENST00000529689 ZNF785A8K8V0 405 aa8.23□□□□□ -1.09
CCDC90B-214ENST00000529689 RPL27AP46776 148 aaKnown RBP8.23□□□□□ -1.09
CCDC90B-214ENST00000529689 JOSD1Q15040 202 aaPredicted RBP8.23□□□□□ -1.09
CCDC90B-214ENST00000529689 ZNF146Q15072 292 aa8.23□□□□□ -1.09
CCDC90B-214ENST00000529689 EFNB3Q15768 340 aa8.23□□□□□ -1.09
CCDC90B-214ENST00000529689 LINC01551Q86U37 167 aa8.23□□□□□ -1.09
CCDC90B-214ENST00000529689 RASL11BQ9BPW5 248 aa8.23□□□□□ -1.09
CCDC90B-214ENST00000529689 CHRDL1Q9BU40 450 aa8.23□□□□□ -1.09
CCDC90B-214ENST00000529689 TBL2Q9Y4P3 447 aaKnown RBP8.23□□□□□ -1.09
CCDC90B-214ENST00000529689 SNAI2O43623 268 aa8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 VENTXO95231 258 aa8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 GNG5P63218 68 aa8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 SSC4DQ8WTU2 575 aa8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 MRPL20Q9BYC9 149 aaKnown RBP8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 EML5Q05BV3 1969 aa8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 IGHV1-18A0A0C4DH31 117 aa8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 RBFOX2O43251 390 aaKnown RBP eCLIP8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 GNG7O60262 68 aa8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 GLRXP35754 106 aa8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 KIR2DL2P43627 348 aaPredicted RBP8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 OR8A1Q8NGG7 326 aa8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 TMEM170AQ8WVE7 144 aa8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 PMCHL2Q9BQD1 86 aa8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 GGTLC1Q9BX51 225 aa8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 MRPS18CQ9Y3D5 142 aaKnown RBP8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 GOLT1BQ9Y3E0 138 aa8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 CGB1A6NKQ9 187 aa8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 HYPMO75409 117 aa8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 CD59P13987 128 aa8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 LINC00479Q96M42 142 aa8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 AAMDCQ9H7C9 122 aa8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 BET1LQ9NYM9 111 aa8.22□□□□□ -1.09
CCDC90B-214ENST00000529689 A6NNC1 897 aa8.21□□□□□ -1.09
CCDC90B-214ENST00000529689 IGHV2-5P01817 119 aa8.21□□□□□ -1.09
CCDC90B-214ENST00000529689 HIST1H1EP10412 219 aaKnown RBP8.21□□□□□ -1.09
CCDC90B-214ENST00000529689 ARF6P62330 175 aa8.21□□□□□ -1.09
CCDC90B-214ENST00000529689 TMEM177Q53S58 311 aa8.21□□□□□ -1.09
CCDC90B-214ENST00000529689 ETFRF1Q6IPR1 90 aa8.21□□□□□ -1.09
CCDC90B-214ENST00000529689 TMUB1Q9BVT8 246 aa8.21□□□□□ -1.09
CCDC90B-214ENST00000529689 MRPL37Q9BZE1 423 aaKnown RBP8.21□□□□□ -1.09
CCDC90B-214ENST00000529689 DCAF16Q9NXF7 216 aa8.21□□□□□ -1.09
CCDC90B-214ENST00000529689 KBTBD11-OT1A0A1B0GTJ5 212 aa8.21□□□□□ -1.1
CCDC90B-214ENST00000529689 C15orf62A8K5M9 175 aa8.21□□□□□ -1.1
CCDC90B-214ENST00000529689 PRRX1P54821 245 aa8.21□□□□□ -1.1
CCDC90B-214ENST00000529689 PAFAH1B2P68402 229 aa8.21□□□□□ -1.1
CCDC90B-214ENST00000529689 LINC00305Q7Z4B0 112 aa8.21□□□□□ -1.1
CCDC90B-214ENST00000529689 ZNF664Q8N3J9 261 aa8.21□□□□□ -1.1
CCDC90B-214ENST00000529689 PERPQ96FX8 193 aa8.21□□□□□ -1.1
CCDC90B-214ENST00000529689 TRAV1-1A0A0B4J248 108 aa8.21□□□□□ -1.1
CCDC90B-214ENST00000529689 DLX1P56177 255 aa8.21□□□□□ -1.1
CCDC90B-214ENST00000529689 C1orf185Q5T7R7 199 aa8.21□□□□□ -1.1
CCDC90B-214ENST00000529689 TEX38Q6PEX7 206 aa8.21□□□□□ -1.1
CCDC90B-214ENST00000529689 GCSAMQ8N6F7 178 aa8.21□□□□□ -1.1
CCDC90B-214ENST00000529689 IL36BQ9NZH7 164 aa8.21□□□□□ -1.1
CCDC90B-214ENST00000529689 CD3EP07766 207 aa8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 SAA1P0DJI8 122 aaPredicted RBP8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 DUX4L9Q6RFH8 374 aaPredicted RBP8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 GOLT1AQ6ZVE7 132 aa8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 OR8B2Q96RD0 313 aa8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 MYO9AB2RTY4 2548 aa8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 FREM2Q5SZK8 3169 aa8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 SETD2Q9BYW2 2564 aaPredicted RBP8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 SIAH2O43255 324 aa8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 GZMBP10144 247 aa8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 LCN2P80188 198 aa8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 RELBQ01201 579 aa8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 SMIM15Q7Z3B0 74 aa8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 RPRMLQ8N4K4 120 aa8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 MGST2Q99735 147 aa8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 AGMATQ9BSE5 352 aa8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 ZNF430Q9H8G1 570 aaPredicted RBP8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 PPP1R14DQ9NXH3 145 aa8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 ORM1P02763 201 aa8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 TCF24Q7RTU0 167 aa8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 C5orf17Q8NAS9 161 aa8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 ZNF114Q8NC26 417 aa8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 ZFYVE26Q68DK2 2539 aa8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 DMDP11532 3685 aa8.2□□□□□ -1.1
CCDC90B-214ENST00000529689 DLL1O00548 723 aa8.19□□□□□ -1.1
CCDC90B-214ENST00000529689 WISP2O76076 250 aa8.19□□□□□ -1.1
CCDC90B-214ENST00000529689 FCGR2BP31994 310 aaPredicted RBP8.19□□□□□ -1.1
CCDC90B-214ENST00000529689 MAS1LP35410 378 aa8.19□□□□□ -1.1
CCDC90B-214ENST00000529689 PRSS8Q16651 343 aa8.19□□□□□ -1.1
CCDC90B-214ENST00000529689 S100A7AQ86SG5 101 aa8.19□□□□□ -1.1
CCDC90B-214ENST00000529689 FAM90A1Q86YD7 464 aa8.19□□□□□ -1.1
CCDC90B-214ENST00000529689 SRSF12Q8WXF0 261 aaKnown RBP8.19□□□□□ -1.1
CCDC90B-214ENST00000529689 ZCCHC14Q8WYQ9 949 aaKnown RBP8.19□□□□□ -1.1
CCDC90B-214ENST00000529689 NDUFAF3Q9BU61 184 aa8.19□□□□□ -1.1
CCDC90B-214ENST00000529689 IFI27L2Q9H2X8 130 aa8.19□□□□□ -1.1
CCDC90B-214ENST00000529689 FBXL15Q9H469 300 aa8.19□□□□□ -1.1
CCDC90B-214ENST00000529689 DKK1O94907 266 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms