RNA–Protein interactions for RNA: ENST00000527902.5

NXF1-206, Transcript of nuclear RNA export factor 1, human

TSL 3

Gene NXF1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-206	ENST00000527902	ZP3	P21754	424 aa		13.62	□□□□□ -0.23
NXF1-206	ENST00000527902	KLF5	Q13887	457 aa	Predicted RBP	13.62	□□□□□ -0.23
NXF1-206	ENST00000527902	OR1L6	Q8NGR2	347 aa		13.62	□□□□□ -0.23
NXF1-206	ENST00000527902	OR1S1	Q8NH92	325 aa		13.62	□□□□□ -0.23
NXF1-206	ENST00000527902	COQ8A	Q8NI60	647 aa		13.62	□□□□□ -0.23
NXF1-206	ENST00000527902	VN1R17P	Q8TDU5	208 aa		13.62	□□□□□ -0.23
NXF1-206	ENST00000527902	SCARB1	Q8WTV0	552 aa		13.62	□□□□□ -0.23
NXF1-206	ENST00000527902	MITD1	Q8WV92	249 aa		13.62	□□□□□ -0.23
NXF1-206	ENST00000527902	MISP3	Q96FF7	219 aa		13.62	□□□□□ -0.23
NXF1-206	ENST00000527902	CXorf58	Q96LI9	332 aa		13.62	□□□□□ -0.23
NXF1-206	ENST00000527902	RBKS	Q9H477	322 aa		13.62	□□□□□ -0.23
NXF1-206	ENST00000527902	ENY2	Q9NPA8	101 aa		13.62	□□□□□ -0.23
NXF1-206	ENST00000527902	TRBV7-1	A0A0A6YYK4	115 aa		13.61	□□□□□ -0.23
NXF1-206	ENST00000527902	SEC14L6	B5MCN3	397 aa		13.61	□□□□□ -0.23
NXF1-206	ENST00000527902	CYB5B	O43169	146 aa		13.61	□□□□□ -0.23
NXF1-206	ENST00000527902	SLC25A6	P12236	298 aa		13.61	□□□□□ -0.23
NXF1-206	ENST00000527902	SNCA	P37840	140 aa		13.61	□□□□□ -0.23
NXF1-206	ENST00000527902	DUSP18	Q8NEJ0	188 aa		13.61	□□□□□ -0.23
NXF1-206	ENST00000527902	TMEM170A	Q8WVE7	144 aa		13.61	□□□□□ -0.23
NXF1-206	ENST00000527902	ZC4H2	Q9NQZ6	224 aa		13.61	□□□□□ -0.23
NXF1-206	ENST00000527902	MT-CO2	P00403	227 aa		13.6	□□□□□ -0.23
NXF1-206	ENST00000527902	IGHV3-48	P01763	117 aa		13.6	□□□□□ -0.23
NXF1-206	ENST00000527902	GPR183	P32249	361 aa		13.6	□□□□□ -0.23
NXF1-206	ENST00000527902	ARL3	P36405	182 aa		13.6	□□□□□ -0.23
NXF1-206	ENST00000527902	SYNJ2BP	P57105	145 aa		13.6	□□□□□ -0.23
NXF1-206	ENST00000527902	RPEL1	Q2QD12	228 aa		13.6	□□□□□ -0.23
NXF1-206	ENST00000527902	MCRIP2	Q9BUT9	160 aa	Known RBP	13.6	□□□□□ -0.23
NXF1-206	ENST00000527902	HEYL	Q9NQ87	328 aa	Predicted RBP	13.6	□□□□□ -0.23
NXF1-206	ENST00000527902	WIPF1	O43516	503 aa		13.59	□□□□□ -0.23
NXF1-206	ENST00000527902	OR2C1	O95371	312 aa		13.59	□□□□□ -0.23
NXF1-206	ENST00000527902	CLEC3B	P05452	202 aa		13.59	□□□□□ -0.23
NXF1-206	ENST00000527902	KRTAP10-11	P60412	298 aa		13.59	□□□□□ -0.23
NXF1-206	ENST00000527902	FAM209B	Q5JX69	171 aa		13.59	□□□□□ -0.23
NXF1-206	ENST00000527902	ZNF431	Q8TF32	576 aa	Predicted RBP	13.59	□□□□□ -0.23
NXF1-206	ENST00000527902	PINX1	Q96BK5	328 aa	Known RBP	13.59	□□□□□ -0.23
NXF1-206	ENST00000527902	C21orf62	Q9NYP8	219 aa		13.59	□□□□□ -0.23
NXF1-206	ENST00000527902	OR2T8	A6NH00	312 aa		13.58	□□□□□ -0.24
NXF1-206	ENST00000527902	GGCT	O75223	188 aa	Known RBP	13.58	□□□□□ -0.24
NXF1-206	ENST00000527902	SPN	P16150	400 aa		13.58	□□□□□ -0.24
NXF1-206	ENST00000527902	HTR2B	P41595	481 aa		13.58	□□□□□ -0.24
NXF1-206	ENST00000527902	DEFA1	P59665	94 aa		13.58	□□□□□ -0.24
NXF1-206	ENST00000527902	DEFA3	P59666	94 aa		13.58	□□□□□ -0.24
NXF1-206	ENST00000527902	ACSM6	Q6P461	480 aa		13.58	□□□□□ -0.24
NXF1-206	ENST00000527902	IL34	Q6ZMJ4	242 aa		13.58	□□□□□ -0.24
NXF1-206	ENST00000527902	SLC24A4	Q8NFF2	622 aa		13.58	□□□□□ -0.24
NXF1-206	ENST00000527902	DTD1	Q8TEA8	209 aa		13.58	□□□□□ -0.24
NXF1-206	ENST00000527902	ZNF414	Q96IQ9	312 aa		13.58	□□□□□ -0.24
NXF1-206	ENST00000527902	OR10C1	Q96KK4	312 aa		13.58	□□□□□ -0.24
NXF1-206	ENST00000527902	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.58	□□□□□ -0.24
NXF1-206	ENST00000527902	CACFD1	Q9UGQ2	172 aa		13.58	□□□□□ -0.24
NXF1-206	ENST00000527902	CCS	O14618	274 aa		13.57	□□□□□ -0.24
NXF1-206	ENST00000527902	TGOLN2	O43493	480 aa		13.57	□□□□□ -0.24
NXF1-206	ENST00000527902	PRB2	P02812	416 aa	Predicted RBP	13.57	□□□□□ -0.24
NXF1-206	ENST00000527902	IL5	P05113	134 aa		13.57	□□□□□ -0.24
NXF1-206	ENST00000527902	ADM	P35318	185 aa		13.57	□□□□□ -0.24
NXF1-206	ENST00000527902	SUB1	P53999	127 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
NXF1-206	ENST00000527902	MLANA	Q16655	118 aa		13.57	□□□□□ -0.24
NXF1-206	ENST00000527902	C2orf83	Q53S99	150 aa		13.57	□□□□□ -0.24
NXF1-206	ENST00000527902	C9orf66	Q5T8R8	295 aa		13.57	□□□□□ -0.24
NXF1-206	ENST00000527902	OR9G4	Q8NGQ1	327 aa		13.57	□□□□□ -0.24
NXF1-206	ENST00000527902	CHRDL1	Q9BU40	450 aa		13.57	□□□□□ -0.24
NXF1-206	ENST00000527902	MAGT1	Q9H0U3	335 aa		13.57	□□□□□ -0.24
NXF1-206	ENST00000527902	MRPL36	Q9P0J6	103 aa	Known RBP	13.57	□□□□□ -0.24
NXF1-206	ENST00000527902	PRKDC	P78527	4128 aa	Known RBP	13.56	□□□□□ -0.24
NXF1-206	ENST00000527902	FAM90A26	D6RGX4	464 aa		13.56	□□□□□ -0.24
NXF1-206	ENST00000527902	IAPP	P10997	89 aa		13.56	□□□□□ -0.24
NXF1-206	ENST00000527902	EDN2	P20800	178 aa		13.56	□□□□□ -0.24
NXF1-206	ENST00000527902	DEFA6	Q01524	100 aa		13.56	□□□□□ -0.24
NXF1-206	ENST00000527902	EGFEM1P	Q0D2K5	195 aa		13.56	□□□□□ -0.24
NXF1-206	ENST00000527902	C12orf45	Q8N5I9	185 aa	Predicted RBP	13.56	□□□□□ -0.24
NXF1-206	ENST00000527902	UBAC2	Q8NBM4	344 aa		13.56	□□□□□ -0.24
NXF1-206	ENST00000527902	OR4D5	Q8NGN0	318 aa		13.56	□□□□□ -0.24
NXF1-206	ENST00000527902	HIPK2	Q9H2X6	1198 aa		13.56	□□□□□ -0.24
NXF1-206	ENST00000527902	SORL1	Q92673	2214 aa		13.56	□□□□□ -0.24
NXF1-206	ENST00000527902	IGHV3-35	A0A0C4DH35	117 aa		13.55	□□□□□ -0.24
NXF1-206	ENST00000527902	INMT-MINDY4	F8WBC2	141 aa		13.55	□□□□□ -0.24
NXF1-206	ENST00000527902	SAP30	O75446	220 aa		13.55	□□□□□ -0.24
NXF1-206	ENST00000527902	IFNA21	P01568	189 aa		13.55	□□□□□ -0.24
NXF1-206	ENST00000527902	NPY1R	P25929	384 aa		13.55	□□□□□ -0.24
NXF1-206	ENST00000527902	FCGR2B	P31994	310 aa	Predicted RBP	13.55	□□□□□ -0.24
NXF1-206	ENST00000527902		Q56UQ5	140 aa		13.55	□□□□□ -0.24
NXF1-206	ENST00000527902	PLET1	Q6UQ28	207 aa		13.55	□□□□□ -0.24
NXF1-206	ENST00000527902	HAPLN4	Q86UW8	402 aa		13.55	□□□□□ -0.24
NXF1-206	ENST00000527902	GPHB5	Q86YW7	130 aa		13.55	□□□□□ -0.24
NXF1-206	ENST00000527902	UXS1	Q8NBZ7	420 aa		13.55	□□□□□ -0.24
NXF1-206	ENST00000527902	BSCL2	Q96G97	398 aa	Predicted RBP	13.55	□□□□□ -0.24
NXF1-206	ENST00000527902	ATP6V0B	Q99437	205 aa		13.55	□□□□□ -0.24
NXF1-206	ENST00000527902	MARVELD1	Q9BSK0	173 aa		13.55	□□□□□ -0.24
NXF1-206	ENST00000527902	GPR61	Q9BZJ8	451 aa		13.55	□□□□□ -0.24
NXF1-206	ENST00000527902	CORT	O00230	105 aa		13.54	□□□□□ -0.24
NXF1-206	ENST00000527902	CSN3	P07498	182 aa		13.54	□□□□□ -0.24
NXF1-206	ENST00000527902	CTSG	P08311	255 aa		13.54	□□□□□ -0.24
NXF1-206	ENST00000527902	OPRK1	P41145	380 aa		13.54	□□□□□ -0.24
NXF1-206	ENST00000527902	MFAP4	P55083	255 aa		13.54	□□□□□ -0.24
NXF1-206	ENST00000527902	ID3	Q02535	119 aa		13.54	□□□□□ -0.24
NXF1-206	ENST00000527902	IAH1	Q2TAA2	248 aa	Predicted RBP	13.54	□□□□□ -0.24
NXF1-206	ENST00000527902	UNQ9165/PRO28630	Q6UXU0	137 aa		13.54	□□□□□ -0.24
NXF1-206	ENST00000527902	ADAMTSL5	Q6ZMM2	481 aa		13.54	□□□□□ -0.24
NXF1-206	ENST00000527902	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.54	□□□□□ -0.24
NXF1-206	ENST00000527902	SYNGR2	O43760	224 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms