RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 GIPP09681 153 aaPredicted RBP12.83□□□□□ -0.36
CAPN1-205ENST00000526954 NPY1RP25929 384 aa12.83□□□□□ -0.36
CAPN1-205ENST00000526954 RPL23AP62750 156 aaKnown RBP12.83□□□□□ -0.36
CAPN1-205ENST00000526954 NDUFA11Q86Y39 141 aa12.83□□□□□ -0.36
CAPN1-205ENST00000526954 PPP1R1CQ8WVI7 109 aa12.83□□□□□ -0.36
CAPN1-205ENST00000526954 C15orf62A8K5M9 175 aa12.82□□□□□ -0.36
CAPN1-205ENST00000526954 ADARB2-AS1A8MUL3 147 aa12.82□□□□□ -0.36
CAPN1-205ENST00000526954 TSC22D2O75157 780 aa12.82□□□□□ -0.36
CAPN1-205ENST00000526954 DEDDO75618 318 aa12.82□□□□□ -0.36
CAPN1-205ENST00000526954 NDUFB8O95169 186 aa12.82□□□□□ -0.36
CAPN1-205ENST00000526954 S100A10P60903 97 aa12.82□□□□□ -0.36
CAPN1-205ENST00000526954 ATP5G2Q06055 141 aa12.82□□□□□ -0.36
CAPN1-205ENST00000526954 SHISA2Q6UWI4 295 aa12.82□□□□□ -0.36
CAPN1-205ENST00000526954 RNASEH2CQ8TDP1 164 aaKnown RBP12.82□□□□□ -0.36
CAPN1-205ENST00000526954 VN1R17PQ8TDU5 208 aa12.82□□□□□ -0.36
CAPN1-205ENST00000526954 PSENENQ9NZ42 101 aa12.82□□□□□ -0.36
CAPN1-205ENST00000526954 I3L2K1 104 aa12.81□□□□□ -0.36
CAPN1-205ENST00000526954 K7EIM0 57 aa12.81□□□□□ -0.36
CAPN1-205ENST00000526954 MPC2O95563 127 aa12.81□□□□□ -0.36
CAPN1-205ENST00000526954 RLN2P04090 185 aa12.81□□□□□ -0.36
CAPN1-205ENST00000526954 PVALBP20472 110 aaPredicted RBP12.81□□□□□ -0.36
CAPN1-205ENST00000526954 RAP2BP61225 183 aa12.81□□□□□ -0.36
CAPN1-205ENST00000526954 RUNX1Q01196 453 aa12.81□□□□□ -0.36
CAPN1-205ENST00000526954 EXOSC2Q13868 293 aaKnown RBP12.81□□□□□ -0.36
CAPN1-205ENST00000526954 C15orf32Q32M92 178 aa12.81□□□□□ -0.36
CAPN1-205ENST00000526954 SPANXN5Q5MJ07 72 aa12.81□□□□□ -0.36
CAPN1-205ENST00000526954 CHAC2Q8WUX2 184 aa12.81□□□□□ -0.36
CAPN1-205ENST00000526954 MISP3Q96FF7 219 aa12.81□□□□□ -0.36
CAPN1-205ENST00000526954 CXorf58Q96LI9 332 aa12.81□□□□□ -0.36
CAPN1-205ENST00000526954 OR4C12Q96R67 309 aa12.81□□□□□ -0.36
CAPN1-205ENST00000526954 STRAPQ9Y3F4 350 aaKnown RBP12.81□□□□□ -0.36
CAPN1-205ENST00000526954 H0YIZ8 118 aa12.8□□□□□ -0.36
CAPN1-205ENST00000526954 L7N2F9 121 aa12.8□□□□□ -0.36
CAPN1-205ENST00000526954 PET100P0DJ07 73 aa12.8□□□□□ -0.36
CAPN1-205ENST00000526954 RAB11AP62491 216 aa12.8□□□□□ -0.36
CAPN1-205ENST00000526954 VAMP2P63027 116 aa12.8□□□□□ -0.36
CAPN1-205ENST00000526954 LRRC37A5PQ49AS3 106 aa12.8□□□□□ -0.36
CAPN1-205ENST00000526954 KHDC1LQ5JSQ8 128 aa12.8□□□□□ -0.36
CAPN1-205ENST00000526954 HIST2H2BDQ6DRA6 164 aa12.8□□□□□ -0.36
CAPN1-205ENST00000526954 ZNF343Q6P1L6 599 aa12.8□□□□□ -0.36
CAPN1-205ENST00000526954 TMEM14EPQ6UXP3 125 aa12.8□□□□□ -0.36
CAPN1-205ENST00000526954 C4orf3Q8WVX3 66 aa12.8□□□□□ -0.36
CAPN1-205ENST00000526954 RNF126Q9BV68 326 aa12.8□□□□□ -0.36
CAPN1-205ENST00000526954 GNB4Q9HAV0 340 aa12.8□□□□□ -0.36
CAPN1-205ENST00000526954 TRBV7-1A0A0A6YYK4 115 aa12.79□□□□□ -0.36
CAPN1-205ENST00000526954 E5RGE8 158 aa12.79□□□□□ -0.36
CAPN1-205ENST00000526954 I3L521 148 aa12.79□□□□□ -0.36
CAPN1-205ENST00000526954 LGALS1P09382 135 aaKnown RBP12.79□□□□□ -0.36
CAPN1-205ENST00000526954 DEFA5Q01523 94 aa12.79□□□□□ -0.36
CAPN1-205ENST00000526954 FAM209BQ5JX69 171 aa12.79□□□□□ -0.36
CAPN1-205ENST00000526954 SCARB1Q8WTV0 552 aa12.79□□□□□ -0.36
CAPN1-205ENST00000526954 ATP6V0BQ99437 205 aa12.79□□□□□ -0.36
CAPN1-205ENST00000526954 OR5AC2Q9NZP5 309 aa12.79□□□□□ -0.36
CAPN1-205ENST00000526954 STAB1Q9NY15 2570 aa12.79□□□□□ -0.36
CAPN1-205ENST00000526954 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.78□□□□□ -0.36
CAPN1-205ENST00000526954 MFSD2BA6NFX1 497 aa12.78□□□□□ -0.36
CAPN1-205ENST00000526954 H3BP45 60 aa12.78□□□□□ -0.36
CAPN1-205ENST00000526954 MT-CO2P00403 227 aa12.78□□□□□ -0.36
CAPN1-205ENST00000526954 IGHV3-11P01762 117 aa12.78□□□□□ -0.36
CAPN1-205ENST00000526954 IFNA4P05014 189 aa12.78□□□□□ -0.36
CAPN1-205ENST00000526954 OR8U8P0C7N1 319 aa12.78□□□□□ -0.36
CAPN1-205ENST00000526954 LYL1P12980 280 aa12.78□□□□□ -0.36
CAPN1-205ENST00000526954 PRSS54Q6PEW0 395 aa12.78□□□□□ -0.36
CAPN1-205ENST00000526954 C18orf65Q6ZTR6 163 aa12.78□□□□□ -0.36
CAPN1-205ENST00000526954 KLHL30-AS1Q8NEE0 82 aa12.78□□□□□ -0.36
CAPN1-205ENST00000526954 ZNF502Q8TBZ5 544 aa12.78□□□□□ -0.36
CAPN1-205ENST00000526954 EEF1AKMT3Q96AZ1 226 aa12.78□□□□□ -0.36
CAPN1-205ENST00000526954 PINX1Q96BK5 328 aaKnown RBP12.78□□□□□ -0.36
CAPN1-205ENST00000526954 FNDC4Q9H6D8 234 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-205ENST00000526954 LYRM2Q9NU23 88 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-205ENST00000526954 TRAV14DV4A0A0A6YYC5 116 aa12.77□□□□□ -0.37
CAPN1-205ENST00000526954 A0A1B0GVG6 124 aa12.77□□□□□ -0.37
CAPN1-205ENST00000526954 RPS10-NUDT3A0A1W2PQS6 291 aa12.77□□□□□ -0.37
CAPN1-205ENST00000526954 PMS2P5A8MQ11 134 aa12.77□□□□□ -0.37
CAPN1-205ENST00000526954 PRSS46E5RG02 174 aa12.77□□□□□ -0.37
CAPN1-205ENST00000526954 FCGR2BP31994 310 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-205ENST00000526954 GPX4P36969 197 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-205ENST00000526954 OPRK1P41145 380 aa12.77□□□□□ -0.37
CAPN1-205ENST00000526954 P2RY1P47900 373 aa12.77□□□□□ -0.37
CAPN1-205ENST00000526954 BCAP31P51572 246 aa12.77□□□□□ -0.37
CAPN1-205ENST00000526954 CD69Q07108 199 aa12.77□□□□□ -0.37
CAPN1-205ENST00000526954 FGL1Q08830 312 aa12.77□□□□□ -0.37
CAPN1-205ENST00000526954 NSUN5P1Q3KNT7 163 aa12.77□□□□□ -0.37
CAPN1-205ENST00000526954 ETFRF1Q6IPR1 90 aa12.77□□□□□ -0.37
CAPN1-205ENST00000526954 ETV3LQ6ZN32 361 aa12.77□□□□□ -0.37
CAPN1-205ENST00000526954 SPATA3Q8NHX4 192 aa12.77□□□□□ -0.37
CAPN1-205ENST00000526954 CACNG8Q8WXS5 425 aa12.77□□□□□ -0.37
CAPN1-205ENST00000526954 CCDC140Q96MF4 163 aa12.77□□□□□ -0.37
CAPN1-205ENST00000526954 TXN2Q99757 166 aa12.77□□□□□ -0.37
CAPN1-205ENST00000526954 C21orf62Q9NYP8 219 aa12.77□□□□□ -0.37
CAPN1-205ENST00000526954 hCG_2014768A0A024R1R8 64 aa12.76□□□□□ -0.37
CAPN1-205ENST00000526954 A0A1W2PRX2 142 aa12.76□□□□□ -0.37
CAPN1-205ENST00000526954 NUDT19A8MXV4 375 aa12.76□□□□□ -0.37
CAPN1-205ENST00000526954 SCAF4O95104 1147 aaKnown RBP12.76□□□□□ -0.37
CAPN1-205ENST00000526954 SLC25A4P12235 298 aa12.76□□□□□ -0.37
CAPN1-205ENST00000526954 CAV2P51636 162 aa12.76□□□□□ -0.37
CAPN1-205ENST00000526954 MFAP4P55083 255 aa12.76□□□□□ -0.37
CAPN1-205ENST00000526954 MLANAQ16655 118 aa12.76□□□□□ -0.37
CAPN1-205ENST00000526954 C8orf86Q6ZUL3 223 aa12.76□□□□□ -0.37
CAPN1-205ENST00000526954 TMEM252Q8N6L7 170 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms