RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 RELQ04864 619 aaPredicted RBP15.55■□□□□ 0.08
VPS28-206ENST00000526734 GUCA2BQ16661 112 aa15.55■□□□□ 0.08
VPS28-206ENST00000526734 ANKRD55Q3KP44 614 aa15.55■□□□□ 0.08
VPS28-206ENST00000526734 SLC16A13Q7RTY0 426 aa15.55■□□□□ 0.08
VPS28-206ENST00000526734 DEDD2Q8WXF8 326 aa15.55■□□□□ 0.08
VPS28-206ENST00000526734 CACNG8Q8WXS5 425 aa15.55■□□□□ 0.08
VPS28-206ENST00000526734 MISP3Q96FF7 219 aa15.55■□□□□ 0.08
VPS28-206ENST00000526734 F8W735 103 aaPredicted RBP15.54■□□□□ 0.08
VPS28-206ENST00000526734 I3L2K1 104 aa15.54■□□□□ 0.08
VPS28-206ENST00000526734 NUPL2O15504 423 aaKnown RBP15.54■□□□□ 0.08
VPS28-206ENST00000526734 ST8SIA3O43173 380 aa15.54■□□□□ 0.08
VPS28-206ENST00000526734 SUB1P53999 127 aaKnown RBP eCLIP15.54■□□□□ 0.08
VPS28-206ENST00000526734 IZUMO4Q1ZYL8 232 aa15.54■□□□□ 0.08
VPS28-206ENST00000526734 AARDQ4LEZ3 155 aa15.54■□□□□ 0.08
VPS28-206ENST00000526734 TM4SF20Q53R12 229 aa15.54■□□□□ 0.08
VPS28-206ENST00000526734 TMEM61Q8N0U2 210 aa15.54■□□□□ 0.08
VPS28-206ENST00000526734 UBAC2Q8NBM4 344 aa15.54■□□□□ 0.08
VPS28-206ENST00000526734 GLYATL2Q8WU03 294 aa15.54■□□□□ 0.08
VPS28-206ENST00000526734 IL22RA2Q969J5 263 aa15.54■□□□□ 0.08
VPS28-206ENST00000526734 ENY2Q9NPA8 101 aa15.54■□□□□ 0.08
VPS28-206ENST00000526734 MLXQ9UH92 298 aa15.54■□□□□ 0.08
VPS28-206ENST00000526734 KCNIP3Q9Y2W7 256 aa15.54■□□□□ 0.08
VPS28-206ENST00000526734 PIGBOS1A0A0B4J2F0 54 aa15.53■□□□□ 0.08
VPS28-206ENST00000526734 K7EMT4 169 aa15.53■□□□□ 0.08
VPS28-206ENST00000526734 EDN2P20800 178 aa15.53■□□□□ 0.08
VPS28-206ENST00000526734 HOXA1P49639 335 aaPredicted RBP15.53■□□□□ 0.08
VPS28-206ENST00000526734 BTNL8Q6UX41 500 aa15.53■□□□□ 0.08
VPS28-206ENST00000526734 OR52E5Q8NH55 327 aa15.53■□□□□ 0.08
VPS28-206ENST00000526734 WDR89Q96FK6 387 aaPredicted RBP15.53■□□□□ 0.08
VPS28-206ENST00000526734 GALNT14Q96FL9 552 aa15.53■□□□□ 0.08
VPS28-206ENST00000526734 CHRDL1Q9BU40 450 aa15.53■□□□□ 0.08
VPS28-206ENST00000526734 RBM38Q9H0Z9 239 aaKnown RBP15.53■□□□□ 0.08
VPS28-206ENST00000526734 MCUBQ9NWR8 336 aa15.53■□□□□ 0.08
VPS28-206ENST00000526734 IGHV3-21A0A0B4J1V1 117 aa15.52■□□□□ 0.08
VPS28-206ENST00000526734 IGHV3-35A0A0C4DH35 117 aa15.52■□□□□ 0.08
VPS28-206ENST00000526734 C15orf62A8K5M9 175 aa15.52■□□□□ 0.08
VPS28-206ENST00000526734 MT-CO2P00403 227 aa15.52■□□□□ 0.08
VPS28-206ENST00000526734 ADMP35318 185 aa15.52■□□□□ 0.08
VPS28-206ENST00000526734 RBPMS2Q6ZRY4 209 aaKnown RBP15.52■□□□□ 0.08
VPS28-206ENST00000526734 SPATA25Q9BR10 227 aa15.52■□□□□ 0.08
VPS28-206ENST00000526734 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.52■□□□□ 0.08
VPS28-206ENST00000526734 A0A0G2JRQ6 117 aa15.51■□□□□ 0.07
VPS28-206ENST00000526734 CTSGP08311 255 aa15.51■□□□□ 0.07
VPS28-206ENST00000526734 NPBWR1P48145 328 aa15.51■□□□□ 0.07
VPS28-206ENST00000526734 SPCS3P61009 180 aa15.51■□□□□ 0.07
VPS28-206ENST00000526734 PYDC2Q56P42 97 aa15.51■□□□□ 0.07
VPS28-206ENST00000526734 PVRIGQ6DKI7 326 aa15.51■□□□□ 0.07
VPS28-206ENST00000526734 TMEM56-RWDD3S4R434 201 aa15.51■□□□□ 0.07
VPS28-206ENST00000526734 STAB2Q8WWQ8 2551 aa15.51■□□□□ 0.07
VPS28-206ENST00000526734 GNG7O60262 68 aa15.5■□□□□ 0.07
VPS28-206ENST00000526734 CD7P09564 240 aa15.5■□□□□ 0.07
VPS28-206ENST00000526734 SRPXP78539 464 aa15.5■□□□□ 0.07
VPS28-206ENST00000526734 TMEM268Q5VZI3 342 aa15.5■□□□□ 0.07
VPS28-206ENST00000526734 LAMTOR1Q6IAA8 161 aa15.5■□□□□ 0.07
VPS28-206ENST00000526734 SELENOHQ8IZQ5 122 aaKnown RBP15.5■□□□□ 0.07
VPS28-206ENST00000526734 DUSP18Q8NEJ0 188 aa15.5■□□□□ 0.07
VPS28-206ENST00000526734 OR52B4Q8NGK2 314 aa15.5■□□□□ 0.07
VPS28-206ENST00000526734 TRIM63Q969Q1 353 aa15.5■□□□□ 0.07
VPS28-206ENST00000526734 PINX1Q96BK5 328 aaKnown RBP15.5■□□□□ 0.07
VPS28-206ENST00000526734 SPAG8Q99932 426 aaPredicted RBP15.5■□□□□ 0.07
VPS28-206ENST00000526734 V9GYH0 126 aa15.5■□□□□ 0.07
VPS28-206ENST00000526734 TENM3Q9P273 2699 aa15.49■□□□□ 0.07
VPS28-206ENST00000526734 OR11H12B2RN74 326 aa15.49■□□□□ 0.07
VPS28-206ENST00000526734 SCGB2A1O75556 95 aa15.49■□□□□ 0.07
VPS28-206ENST00000526734 ANXA3P12429 323 aa15.49■□□□□ 0.07
VPS28-206ENST00000526734 ETV6P41212 452 aa15.49■□□□□ 0.07
VPS28-206ENST00000526734 KLF9Q13886 244 aaPredicted RBP15.49■□□□□ 0.07
VPS28-206ENST00000526734 HAGHQ16775 308 aa15.49■□□□□ 0.07
VPS28-206ENST00000526734 SPINK9Q5DT21 86 aa15.49■□□□□ 0.07
VPS28-206ENST00000526734 LINC00322Q6ZN03 302 aaPredicted RBP15.49■□□□□ 0.07
VPS28-206ENST00000526734 TOMM5Q8N4H5 51 aa15.49■□□□□ 0.07
VPS28-206ENST00000526734 LHFPL5Q8TAF8 219 aa15.49■□□□□ 0.07
VPS28-206ENST00000526734 C20orf24Q9BUV8 137 aa15.49■□□□□ 0.07
VPS28-206ENST00000526734 C3orf84H3BNL1 204 aa15.48■□□□□ 0.07
VPS28-206ENST00000526734 TSPAN4O14817 238 aa15.48■□□□□ 0.07
VPS28-206ENST00000526734 RNASE2P10153 161 aaKnown RBP15.48■□□□□ 0.07
VPS28-206ENST00000526734 BSXQ3C1V8 233 aa15.48■□□□□ 0.07
VPS28-206ENST00000526734 CCDC190Q86UF4 302 aa15.48■□□□□ 0.07
VPS28-206ENST00000526734 TMEM230Q96A57 120 aa15.48■□□□□ 0.07
VPS28-206ENST00000526734 CACNG5Q9UF02 275 aa15.48■□□□□ 0.07
VPS28-206ENST00000526734 SCAF4O95104 1147 aaKnown RBP15.47■□□□□ 0.07
VPS28-206ENST00000526734 BMI1P35226 326 aa15.47■□□□□ 0.07
VPS28-206ENST00000526734 HTR2BP41595 481 aa15.47■□□□□ 0.07
VPS28-206ENST00000526734 TMEM187Q14656 261 aa15.47■□□□□ 0.07
VPS28-206ENST00000526734 SPANXN2Q5MJ10 180 aa15.47■□□□□ 0.07
VPS28-206ENST00000526734 Q6ZRM9 215 aa15.47■□□□□ 0.07
VPS28-206ENST00000526734 OR10C1Q96KK4 312 aa15.47■□□□□ 0.07
VPS28-206ENST00000526734 GINS3Q9BRX5 216 aa15.47■□□□□ 0.07
VPS28-206ENST00000526734 SRD5A3Q9H8P0 318 aa15.47■□□□□ 0.07
VPS28-206ENST00000526734 A0A0B4J2A0 478 aa15.46■□□□□ 0.07
VPS28-206ENST00000526734 ZNF79Q15937 498 aa15.46■□□□□ 0.07
VPS28-206ENST00000526734 DEFB125Q8N687 156 aa15.46■□□□□ 0.07
VPS28-206ENST00000526734 GPR146Q96CH1 333 aa15.46■□□□□ 0.07
VPS28-206ENST00000526734 CITED4Q96RK1 184 aa15.46■□□□□ 0.07
VPS28-206ENST00000526734 SLC25A21Q9BQT8 299 aaPredicted RBP15.46■□□□□ 0.07
VPS28-206ENST00000526734 SHPKQ9UHJ6 478 aa15.46■□□□□ 0.07
VPS28-206ENST00000526734 RPS10-NUDT3A0A1W2PQS6 291 aa15.45■□□□□ 0.06
VPS28-206ENST00000526734 YIF1AO95070 293 aa15.45■□□□□ 0.06
VPS28-206ENST00000526734 SULT1A3P0DMM9 295 aa15.45■□□□□ 0.06
VPS28-206ENST00000526734 SULT1A4P0DMN0 295 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms