RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 RTBDNQ9BSG5 229 aaPredicted RBP3.52□□□□□ -1.85
USP48-211ENST00000526044 OR2D2Q9H210 308 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 IFI27L2Q9H2X8 130 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 SDHAF2Q9NX18 166 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 ZNRD1Q9P1U0 126 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 COPZ2Q9P299 210 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 C14orf166Q9Y224 244 aaKnown RBP3.52□□□□□ -1.85
USP48-211ENST00000526044 KCNIP3Q9Y2W7 256 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 HILPDAQ9Y5L2 63 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 SOX21Q9Y651 276 aaPredicted RBP3.52□□□□□ -1.85
USP48-211ENST00000526044 PTPN13Q12923 2485 aa3.52□□□□□ -1.85
USP48-211ENST00000526044 BAHCC1Q9P281 2608 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 IGHV1-3A0A0C4DH29 117 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 RNF222A6NCQ9 220 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 RNF212BA8MTL3 300 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 H7C2Y5 167 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 ARPC1BO15143 372 aaKnown RBP3.51□□□□□ -1.85
USP48-211ENST00000526044 TNFSF12O43508 249 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 PTTG1O95997 202 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 FBP1P09467 338 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 FAM157CP0CG43 387 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 SAA2P0DJI9 122 aaPredicted RBP3.51□□□□□ -1.85
USP48-211ENST00000526044 CT45A6P0DMU7 189 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 CT45A5P0DMU8 189 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 CT45A7P0DMV0 189 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 AKR1C4P17516 323 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 SLC6A1P30531 599 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 DUTP33316 252 aaKnown RBP3.51□□□□□ -1.85
USP48-211ENST00000526044 ZNF137PP52743 207 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 PIGPP57054 158 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 RND3P61587 244 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 RAB11AP62491 216 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 RPL30P62888 115 aaKnown RBP3.51□□□□□ -1.85
USP48-211ENST00000526044 ZNF816Q0VGE8 651 aaPredicted RBP3.51□□□□□ -1.85
USP48-211ENST00000526044 CATR1Q13166 79 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 DIAPH2-AS1Q14236 149 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 RGS21Q2M5E4 152 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 LDLRAD2Q5SZI1 272 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 KCNIP4Q6PIL6 250 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 PLET1Q6UQ28 207 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 UQCC3Q6UW78 93 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 CD164L2Q6UWJ8 174 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 TMED4Q7Z7H5 227 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 SLC25A42Q86VD7 318 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 SGPP2Q8IWX5 399 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 CENPSQ8N2Z9 138 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 CCDC71LQ8N9Z2 235 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 LRRC20Q8TCA0 184 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 CAPSLQ8WWF8 208 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 RTN4IP1Q8WWV3 396 aaPredicted RBP3.51□□□□□ -1.85
USP48-211ENST00000526044 C22orf15Q8WYQ4 148 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 MRGPRFQ96AM1 343 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 HSD17B10Q99714 261 aaKnown RBP3.51□□□□□ -1.85
USP48-211ENST00000526044 NABP2Q9BQ15 211 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 FXYD6Q9H0Q3 95 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 ALX4Q9H161 411 aaPredicted RBP3.51□□□□□ -1.85
USP48-211ENST00000526044 C5orf66Q9H5L9 145 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 FLVCR2Q9UPI3 526 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 VSIG4Q9Y279 399 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 PRELID3BQ9Y3B1 194 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 NUBP2Q9Y5Y2 271 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 WNK2Q9Y3S1 2297 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 MED13LQ71F56 2210 aa3.51□□□□□ -1.85
USP48-211ENST00000526044 CENPEQ02224 2701 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 C3orf85A0A1B0GTC6 90 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 INMT-MINDY4F8WBC2 141 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 DFFBO76075 338 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 DHFRP00374 187 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 APOA2P02652 100 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 OR4E1P0C645 316 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 ANXA3P12429 323 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 SPNP16150 400 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 CD24P25063 80 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 F2RP25116 425 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 PAX6P26367 422 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 BTCP35070 178 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 KIR2DS2P43631 304 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 LPAR6P43657 344 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 RAB13P51153 203 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 RAG2P55895 527 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 TAS2R31P59538 309 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 DHODHQ02127 395 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 EIF4EBP1Q13541 118 aaPredicted RBP3.5□□□□□ -1.85
USP48-211ENST00000526044 HES1Q14469 280 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 TMEM187Q14656 261 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 RTL8BQ17RB0 113 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 DEFB112Q30KQ8 113 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 SP6Q3SY56 376 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 ZFP69Q49AA0 526 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 SMUG1Q53HV7 270 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 TMEM128Q5BJH2 165 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 ZC2HC1BQ5TFG8 222 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 SPAG16Q8N0X2 631 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 DYNAPQ8N1N2 210 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 TCTEX1D1Q8N7M0 179 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 MAPKAPK5-AS1Q8N8E1 139 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 OR1L4Q8NGR5 311 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 OR2T10Q8NGZ9 312 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 OR51H1Q8NH63 302 aa3.5□□□□□ -1.85
USP48-211ENST00000526044 TCTEX1D2Q8WW35 142 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms