RNA–Protein interactions for RNA: ENST00000525293.5

CD44-216, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-216ENST00000525293 MRPL32Q9BYC8 188 aaKnown RBP1.71□□□□□ -2.14
CD44-216ENST00000525293 PBOV1Q9GZY1 135 aa1.71□□□□□ -2.14
CD44-216ENST00000525293 MED28Q9H204 178 aa1.71□□□□□ -2.14
CD44-216ENST00000525293 C11orf68Q9H3H3 251 aaKnown RBP1.71□□□□□ -2.14
CD44-216ENST00000525293 PLEKHA3Q9HB20 300 aa1.71□□□□□ -2.14
CD44-216ENST00000525293 HEBP1Q9NRV9 189 aa1.71□□□□□ -2.14
CD44-216ENST00000525293 RPRMQ9NS64 109 aa1.71□□□□□ -2.14
CD44-216ENST00000525293 ZNF222Q9UK12 451 aa1.71□□□□□ -2.14
CD44-216ENST00000525293 TPRKBQ9Y3C4 175 aa1.71□□□□□ -2.14
CD44-216ENST00000525293 NEUROG3Q9Y4Z2 214 aa1.71□□□□□ -2.14
CD44-216ENST00000525293 HES2Q9Y543 173 aa1.71□□□□□ -2.14
CD44-216ENST00000525293 ADAMTSL1Q8N6G6 1762 aa1.71□□□□□ -2.14
CD44-216ENST00000525293 PTPRKQ15262 1439 aa1.71□□□□□ -2.14
CD44-216ENST00000525293 MYH7P12883 1935 aa1.71□□□□□ -2.14
CD44-216ENST00000525293 PLXND1Q9Y4D7 1925 aa1.71□□□□□ -2.14
CD44-216ENST00000525293 KDM5CP41229 1560 aa1.71□□□□□ -2.14
CD44-216ENST00000525293 LRRC7Q96NW7 1537 aa1.71□□□□□ -2.14
CD44-216ENST00000525293 CAMTA1Q9Y6Y1 1673 aa1.71□□□□□ -2.14
CD44-216ENST00000525293 ECM29Q5VYK3 1845 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 MYH10P35580 1976 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 ATP10BO94823 1461 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 GOLGA3Q08378 1498 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 MYH13Q9UKX3 1938 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 FER1L5A0AVI2 2057 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 IGHV2-26A0A0B4J1V2 119 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 TRBV5-4A0A0C4DH59 114 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 WI2-2373I1.2A0A1W2PRP0 233 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 C7orf77A4D0Y5 90 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 EPOPA6NHQ4 379 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 G3V3Q6 166 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 CDX4O14627 284 aaPredicted RBP1.7□□□□□ -2.14
CD44-216ENST00000525293 GEMIN2O14893 280 aaKnown RBP1.7□□□□□ -2.14
CD44-216ENST00000525293 SLC37A4O43826 429 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 TYROBPO43914 113 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 YPEL1O60688 119 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 SS18L1O75177 396 aaPredicted RBP1.7□□□□□ -2.14
CD44-216ENST00000525293 PDCD6O75340 191 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 HYPMO75409 117 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 CYB5AP00167 134 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 IGHG1P01857 330 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 IGHG2P01859 326 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 MT-ND6P03923 174 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 IGLC2P0DOY2 106 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 IGLC3P0DOY3 106 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 CRYBB3P26998 211 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 CD70P32970 193 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 SRP14P37108 136 aaKnown RBP1.7□□□□□ -2.14
CD44-216ENST00000525293 TMEM183BQ1AE95 376 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 NSUN5P1Q3KNT7 163 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 VMA21Q3ZAQ7 101 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 TTC32Q5I0X7 151 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 COA6Q5JTJ3 125 aaKnown RBP1.7□□□□□ -2.14
CD44-216ENST00000525293 LINC00242Q5T6M2 205 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 FAM222AQ5U5X8 452 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 ZNF660Q6AZW8 331 aaPredicted RBP1.7□□□□□ -2.14
CD44-216ENST00000525293 XAF1Q6GPH4 301 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 LCN8Q6JVE9 175 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 Q6Q795 121 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 Q6ZRU5 148 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 CLEC20AQ6ZU45 233 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 GVQW1Q8N7I0 195 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 ZFP62Q8NB50 900 aaPredicted RBP1.7□□□□□ -2.14
CD44-216ENST00000525293 NUP35Q8NFH5 326 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 OR11H7Q8NGC8 314 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 OR5D16Q8NGK9 328 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 OR2A1Q8NGT9 310 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 OR5AK2Q8NH90 309 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 BRK1Q8WUW1 75 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 LSM10Q969L4 123 aaKnown RBP1.7□□□□□ -2.14
CD44-216ENST00000525293 TMEM230Q96A57 120 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 NEURL3Q96EH8 262 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 LRRIQ1Q96JM4 1722 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 LINC00167Q96N53 147 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 YPEL2Q96QA6 119 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 METTL26Q96S19 204 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 PEBP4Q96S96 227 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 AMELYQ99218 206 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 SLC25A21Q9BQT8 299 aaPredicted RBP1.7□□□□□ -2.14
CD44-216ENST00000525293 C20orf78Q9BR46 151 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 THTPAQ9BU02 230 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 SNRNP25Q9BV90 132 aaKnown RBP1.7□□□□□ -2.14
CD44-216ENST00000525293 ZNF471Q9BX82 626 aaPredicted RBP1.7□□□□□ -2.14
CD44-216ENST00000525293 PLA2G2FQ9BZM2 168 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 AICDAQ9GZX7 198 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 BANF2Q9H503 90 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 C16orf95Q9H693 158 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 DHRS4-AS1Q9P1J3 65 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 ANKRD50Q9ULJ7 1429 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 POMPQ9Y244 141 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 WASHC3Q9Y3C0 194 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 V9GY05 133 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 CTTNBP2Q8WZ74 1663 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 ARAP3Q8WWN8 1544 aa1.7□□□□□ -2.14
CD44-216ENST00000525293 MADDQ8WXG6 1647 aa1.69□□□□□ -2.14
CD44-216ENST00000525293 PLA2R1Q13018 1463 aa1.69□□□□□ -2.14
CD44-216ENST00000525293 SETD1AO15047 1707 aaKnown RBP1.69□□□□□ -2.14
CD44-216ENST00000525293 ATRNO75882 1429 aa1.69□□□□□ -2.14
CD44-216ENST00000525293 TNS2Q63HR2 1409 aa1.69□□□□□ -2.14
CD44-216ENST00000525293 XIRP1Q702N8 1843 aaKnown RBP1.69□□□□□ -2.14
CD44-216ENST00000525293 TRAV19A0A0A6YYK7 116 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms