RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 ZNF355PQ9NSJ1 428 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 CENPMQ9NSP4 180 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 RBFOX1Q9NWB1 397 aaKnown RBP0.95□□□□□ -2.26
CD44-212ENST00000524922 DOK5Q9P104 306 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 GNG12Q9UBI6 72 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 GIMAP2Q9UG22 337 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 SH3GLB1Q9Y371 365 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 LINC00588Q9Y4M8 146 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 IGKV1-27A0A075B6S5 117 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 TRAV26-1A0A087WT03 109 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 IGHV7-4-1A0A0J9YVY3 117 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 A0A0J9YXV3 536 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 FAM231BA6NCW3 169 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 HELTA6NFD8 242 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 H0YJX3 145 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 FXYD1O00168 92 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 AIPO00170 330 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 ANGPT2O15123 496 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 SYT7O43581 403 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 NAPSAO96009 420 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 IGLV2-23P01705 113 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 IGHV3-11P01762 117 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 HLA-AP01891 365 aaKnown RBP0.94□□□□□ -2.26
CD44-212ENST00000524922 MT-ND4P03905 459 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 SEMG1P04279 462 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 ATP5G1P05496 136 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 SEC11BP0C7V7 166 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 ZNF735P0CB33 412 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 UBBP0CG47 229 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 SAA2P0DJI9 122 aaPredicted RBP0.94□□□□□ -2.26
CD44-212ENST00000524922 CT45A6P0DMU7 189 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 CT45A5P0DMU8 189 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 CT45A7P0DMV0 189 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 PRB4P10163 310 aaPredicted RBP0.94□□□□□ -2.26
CD44-212ENST00000524922 SLC2A1P11166 492 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 HLA-DRB4P13762 266 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 GTF2F2P13984 249 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 PGAM2P15259 253 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 PRKACAP17612 351 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 CELP19835 753 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 ATP6V1B2P21281 511 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 SLC2A5P22732 501 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 NFYBP25208 207 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 ATP5G3P48201 142 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 HSPA13P48723 471 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 GBX2P52951 348 aaPredicted RBP0.94□□□□□ -2.26
CD44-212ENST00000524922 EMP1P54849 157 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 RBM11P57052 281 aaKnown RBP0.94□□□□□ -2.26
CD44-212ENST00000524922 LINC00315P59091 139 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 PSME3P61289 254 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 PRB3Q04118 309 aaPredicted RBP0.94□□□□□ -2.26
CD44-212ENST00000524922 ARFRP1Q13795 201 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 CIRBPQ14011 172 aaKnown RBP0.94□□□□□ -2.26
CD44-212ENST00000524922 DIAPH2-AS1Q14236 149 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 CDK10Q15131 360 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 PLGLAQ15195 96 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 HMGN3Q15651 99 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 UBE2V2Q15819 145 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 POU2AF1Q16633 256 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 GUK1Q16774 197 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 RTL8BQ17RB0 113 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 BCL2L15Q5TBC7 163 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 TTC23Q5W5X9 447 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 ZNF880Q6PDB4 577 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 EPGNQ6UW88 154 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 C2orf66Q6UXQ4 117 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 HMGN2P46Q86SG4 172 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 CROCCP3Q8IVE0 287 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 FAM219AQ8IW50 185 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 STHQ8IWL8 128 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 IFT20Q8IY31 132 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 Q8N814 137 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 SAMD12Q8N8I0 201 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 CCDC71LQ8N9Z2 235 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 OR5D14Q8NGL3 314 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 OR10G9Q8NGN4 311 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 OR13F1Q8NGS4 319 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 OR6N2Q8NGY6 317 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 OR4K13Q8NH42 304 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 OCC1Q8TAD7 63 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 OR51E1Q8TCB6 317 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 GNPDA2Q8TDQ7 276 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 RXFP4Q8TDU9 374 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 SRSF12Q8WXF0 261 aaKnown RBP0.94□□□□□ -2.26
CD44-212ENST00000524922 ACOT12Q8WYK0 555 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 RBPMSQ93062 196 aaKnown RBP0.94□□□□□ -2.26
CD44-212ENST00000524922 ARL11Q969Q4 196 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 GALMQ96C23 342 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 PPP1R14BQ96C90 147 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 ABHD14BQ96IU4 210 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 C7orf34Q96L11 122 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 TSSK2Q96PF2 358 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 OR5B12Q96R08 314 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 ZNF184Q99676 751 aaPredicted RBP0.94□□□□□ -2.26
CD44-212ENST00000524922 HOPXQ9BPY8 73 aaPredicted RBP0.94□□□□□ -2.26
CD44-212ENST00000524922 LINC00467Q9BRT7 94 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 TSSK6Q9BXA6 273 aa0.94□□□□□ -2.26
CD44-212ENST00000524922 MRPL20Q9BYC9 149 aaKnown RBP0.94□□□□□ -2.26
CD44-212ENST00000524922 ZNF430Q9H8G1 570 aaPredicted RBP0.94□□□□□ -2.26
CD44-212ENST00000524922 ISG20L2Q9H9L3 353 aaKnown RBP0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms