RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 RLN1P04808 185 aa8.3□□□□□ -1.08
SDCBP-211ENST00000523441 SPART-AS1P0CW21 52 aa8.3□□□□□ -1.08
SDCBP-211ENST00000523441 LPAR6P43657 344 aa8.3□□□□□ -1.08
SDCBP-211ENST00000523441 SSX1Q16384 188 aa8.3□□□□□ -1.08
SDCBP-211ENST00000523441 SPINK9Q5DT21 86 aa8.3□□□□□ -1.08
SDCBP-211ENST00000523441 PSMG4Q5JS54 123 aa8.3□□□□□ -1.08
SDCBP-211ENST00000523441 THOC7Q6I9Y2 204 aaKnown RBP8.3□□□□□ -1.08
SDCBP-211ENST00000523441 HSD17B13Q7Z5P4 300 aaPredicted RBP8.3□□□□□ -1.08
SDCBP-211ENST00000523441 SPATA12Q7Z6I5 190 aa8.3□□□□□ -1.08
SDCBP-211ENST00000523441 CSNK1G2-AS1Q8NCQ2 148 aa8.3□□□□□ -1.08
SDCBP-211ENST00000523441 TSPAN14Q8NG11 270 aa8.3□□□□□ -1.08
SDCBP-211ENST00000523441 TMEM56Q96MV1 263 aa8.3□□□□□ -1.08
SDCBP-211ENST00000523441 VSIRQ9H7M9 311 aa8.3□□□□□ -1.08
SDCBP-211ENST00000523441 TMED3Q9Y3Q3 217 aa8.3□□□□□ -1.08
SDCBP-211ENST00000523441 DMBT1Q9UGM3 2413 aaPredicted RBP8.3□□□□□ -1.08
SDCBP-211ENST00000523441 DBX1A6NMT0 343 aa8.29□□□□□ -1.08
SDCBP-211ENST00000523441 MARCH11A6NNE9 402 aa8.29□□□□□ -1.08
SDCBP-211ENST00000523441 I3L2K1 104 aa8.29□□□□□ -1.08
SDCBP-211ENST00000523441 K7EQG2 157 aa8.29□□□□□ -1.08
SDCBP-211ENST00000523441 RBFOX2O43251 390 aaKnown RBP eCLIP8.29□□□□□ -1.08
SDCBP-211ENST00000523441 MYL9P24844 172 aa8.29□□□□□ -1.08
SDCBP-211ENST00000523441 RANBP1P43487 201 aa8.29□□□□□ -1.08
SDCBP-211ENST00000523441 PPP5CP53041 499 aa8.29□□□□□ -1.08
SDCBP-211ENST00000523441 DHRS2Q13268 280 aa8.29□□□□□ -1.08
SDCBP-211ENST00000523441 TRAM1Q15629 374 aa8.29□□□□□ -1.08
SDCBP-211ENST00000523441 POU2AF1Q16633 256 aa8.29□□□□□ -1.08
SDCBP-211ENST00000523441 TMEM88Q6PEY1 159 aa8.29□□□□□ -1.08
SDCBP-211ENST00000523441 TPRA1Q86W33 373 aa8.29□□□□□ -1.08
SDCBP-211ENST00000523441 BEST4Q8NFU0 473 aa8.29□□□□□ -1.08
SDCBP-211ENST00000523441 ATG101Q9BSB4 218 aa8.29□□□□□ -1.08
SDCBP-211ENST00000523441 TMEM231Q9H6L2 316 aa8.29□□□□□ -1.08
SDCBP-211ENST00000523441 PLEKHA2Q9HB19 425 aa8.29□□□□□ -1.08
SDCBP-211ENST00000523441 A0A1B0GU03 582 aa8.28□□□□□ -1.08
SDCBP-211ENST00000523441 MEIS3P1A6NDR6 274 aa8.28□□□□□ -1.08
SDCBP-211ENST00000523441 CD5P06127 495 aa8.28□□□□□ -1.08
SDCBP-211ENST00000523441 RAB3BP20337 219 aa8.28□□□□□ -1.08
SDCBP-211ENST00000523441 NPPCP23582 126 aa8.28□□□□□ -1.08
SDCBP-211ENST00000523441 P2RY1P47900 373 aa8.28□□□□□ -1.08
SDCBP-211ENST00000523441 ARL6IP1Q15041 203 aa8.28□□□□□ -1.08
SDCBP-211ENST00000523441 RAB40CQ96S21 281 aa8.28□□□□□ -1.08
SDCBP-211ENST00000523441 ATP6V0BQ99437 205 aa8.28□□□□□ -1.08
SDCBP-211ENST00000523441 ZFAND3Q9H8U3 227 aa8.28□□□□□ -1.08
SDCBP-211ENST00000523441 SCN3BQ9NY72 215 aa8.28□□□□□ -1.08
SDCBP-211ENST00000523441 ERICH4A6NGS2 130 aa8.27□□□□□ -1.09
SDCBP-211ENST00000523441 CASQ2O14958 399 aaPredicted RBP8.27□□□□□ -1.09
SDCBP-211ENST00000523441 PSMA1P25786 263 aaKnown RBP8.27□□□□□ -1.09
SDCBP-211ENST00000523441 HERV-K104P61576 105 aa8.27□□□□□ -1.09
SDCBP-211ENST00000523441 RNF212Q495C1 297 aa8.27□□□□□ -1.09
SDCBP-211ENST00000523441 FAM222AQ5U5X8 452 aa8.27□□□□□ -1.09
SDCBP-211ENST00000523441 ZNF600Q6ZNG1 722 aa8.27□□□□□ -1.09
SDCBP-211ENST00000523441 C6orf223Q8N319 242 aa8.27□□□□□ -1.09
SDCBP-211ENST00000523441 ZBTB34Q8NCN2 500 aa8.27□□□□□ -1.09
SDCBP-211ENST00000523441 OR1P1Q8NH06 330 aa8.27□□□□□ -1.09
SDCBP-211ENST00000523441 FCAMRQ8WWV6 532 aa8.27□□□□□ -1.09
SDCBP-211ENST00000523441 TXN2Q99757 166 aa8.27□□□□□ -1.09
SDCBP-211ENST00000523441 YTHDF1Q9BYJ9 559 aaKnown RBP8.27□□□□□ -1.09
SDCBP-211ENST00000523441 COMMD9Q9P000 198 aa8.27□□□□□ -1.09
SDCBP-211ENST00000523441 DNAH5Q8TE73 4624 aa8.26□□□□□ -1.09
SDCBP-211ENST00000523441 TRAV2A0A0B4J234 112 aa8.26□□□□□ -1.09
SDCBP-211ENST00000523441 HELTA6NFD8 242 aa8.26□□□□□ -1.09
SDCBP-211ENST00000523441 EPM2AB3EWF7 344 aa8.26□□□□□ -1.09
SDCBP-211ENST00000523441 INAFM2P0DMQ5 153 aa8.26□□□□□ -1.09
SDCBP-211ENST00000523441 DEFB1P60022 68 aa8.26□□□□□ -1.09
SDCBP-211ENST00000523441 ZNF367Q7RTV3 350 aa8.26□□□□□ -1.09
SDCBP-211ENST00000523441 TMEM230Q96A57 120 aa8.26□□□□□ -1.09
SDCBP-211ENST00000523441 METTL26Q96S19 204 aa8.26□□□□□ -1.09
SDCBP-211ENST00000523441 MGLLQ99685 303 aa8.26□□□□□ -1.09
SDCBP-211ENST00000523441 NIPSNAP3BQ9BS92 247 aa8.26□□□□□ -1.09
SDCBP-211ENST00000523441 ACOT13Q9NPJ3 140 aa8.26□□□□□ -1.09
SDCBP-211ENST00000523441 PRNDQ9UKY0 176 aa8.26□□□□□ -1.09
SDCBP-211ENST00000523441 TRAV18A0A075B6X5 111 aa8.25□□□□□ -1.09
SDCBP-211ENST00000523441 A0A1W2PS18 150 aa8.25□□□□□ -1.09
SDCBP-211ENST00000523441 F2RP25116 425 aa8.25□□□□□ -1.09
SDCBP-211ENST00000523441 NPBWR1P48145 328 aa8.25□□□□□ -1.09
SDCBP-211ENST00000523441 NUTF2P61970 127 aaKnown RBP8.25□□□□□ -1.09
SDCBP-211ENST00000523441 DLK1P80370 383 aa8.25□□□□□ -1.09
SDCBP-211ENST00000523441 MLLT11Q13015 90 aaPredicted RBP8.25□□□□□ -1.09
SDCBP-211ENST00000523441 LINC01559Q495D7 138 aa8.25□□□□□ -1.09
SDCBP-211ENST00000523441 C4orf48Q5BLP8 95 aa8.25□□□□□ -1.09
SDCBP-211ENST00000523441 C22orf42Q6IC83 251 aa8.25□□□□□ -1.09
SDCBP-211ENST00000523441 GSG1LQ6UXU4 331 aa8.25□□□□□ -1.09
SDCBP-211ENST00000523441 PACRGLQ8N7B6 248 aa8.25□□□□□ -1.09
SDCBP-211ENST00000523441 DCANP1Q8TF63 244 aa8.25□□□□□ -1.09
SDCBP-211ENST00000523441 GRAMD2BQ96HH9 432 aa8.25□□□□□ -1.09
SDCBP-211ENST00000523441 NARS2Q96I59 477 aaKnown RBP8.25□□□□□ -1.09
SDCBP-211ENST00000523441 C1QTNF4Q9BXJ3 329 aa8.25□□□□□ -1.09
SDCBP-211ENST00000523441 RNF167Q9H6Y7 350 aa8.25□□□□□ -1.09
SDCBP-211ENST00000523441 NBDYA0A0U1RRE5 68 aa8.24□□□□□ -1.09
SDCBP-211ENST00000523441 RGS10O43665 173 aa8.24□□□□□ -1.09
SDCBP-211ENST00000523441 OR4A16Q8NH70 328 aa8.24□□□□□ -1.09
SDCBP-211ENST00000523441 LGALS14Q8TCE9 139 aa8.24□□□□□ -1.09
SDCBP-211ENST00000523441 FKBP11Q9NYL4 201 aa8.24□□□□□ -1.09
SDCBP-211ENST00000523441 DKK2Q9UBU2 259 aa8.24□□□□□ -1.09
SDCBP-211ENST00000523441 DAPK2Q9UIK4 370 aa8.24□□□□□ -1.09
SDCBP-211ENST00000523441 TRAV1-2A0A0B4J238 106 aa8.23□□□□□ -1.09
SDCBP-211ENST00000523441 RPS10-NUDT3A0A1W2PQS6 291 aa8.23□□□□□ -1.09
SDCBP-211ENST00000523441 PGLYRP1O75594 196 aaPredicted RBP8.23□□□□□ -1.09
SDCBP-211ENST00000523441 TMEM50AO95807 157 aa8.23□□□□□ -1.09
SDCBP-211ENST00000523441 NUDT3O95989 172 aa8.23□□□□□ -1.09
SDCBP-211ENST00000523441 GNRHRP30968 328 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms