RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 DEFB131AP59861 70 aa11.1□□□□□ -0.63
TRAPPC9-213ENST00000522504 TMEM187Q14656 261 aa11.1□□□□□ -0.63
TRAPPC9-213ENST00000522504 RBMY1FQ15415 496 aaKnown RBP11.1□□□□□ -0.63
TRAPPC9-213ENST00000522504 ZNF2Q9BSG1 426 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC9-213ENST00000522504 FUNDC2Q9BWH2 189 aa11.1□□□□□ -0.63
TRAPPC9-213ENST00000522504 FXYD6Q9H0Q3 95 aa11.1□□□□□ -0.63
TRAPPC9-213ENST00000522504 MS4A6AQ9H2W1 248 aa11.1□□□□□ -0.63
TRAPPC9-213ENST00000522504 PRNDQ9UKY0 176 aa11.1□□□□□ -0.63
TRAPPC9-213ENST00000522504 SSR3Q9UNL2 185 aa11.1□□□□□ -0.63
TRAPPC9-213ENST00000522504 LOC100506127A0A0U1RQW1 187 aa11.09□□□□□ -0.63
TRAPPC9-213ENST00000522504 C15orf61A6NNL5 157 aa11.09□□□□□ -0.63
TRAPPC9-213ENST00000522504 SNAPC5O75971 98 aa11.09□□□□□ -0.63
TRAPPC9-213ENST00000522504 DFFBO76075 338 aa11.09□□□□□ -0.63
TRAPPC9-213ENST00000522504 MT-CO2P00403 227 aa11.09□□□□□ -0.63
TRAPPC9-213ENST00000522504 PMP2P02689 132 aa11.09□□□□□ -0.63
TRAPPC9-213ENST00000522504 MFAP4P55083 255 aa11.09□□□□□ -0.63
TRAPPC9-213ENST00000522504 SCAND1P57086 179 aa11.09□□□□□ -0.63
TRAPPC9-213ENST00000522504 TCTAP57738 103 aa11.09□□□□□ -0.63
TRAPPC9-213ENST00000522504 GPR107Q5VW38 600 aa11.09□□□□□ -0.63
TRAPPC9-213ENST00000522504 TOMM20LQ6UXN7 152 aa11.09□□□□□ -0.63
TRAPPC9-213ENST00000522504 TMEM56Q96MV1 263 aa11.09□□□□□ -0.63
TRAPPC9-213ENST00000522504 VSIRQ9H7M9 311 aa11.09□□□□□ -0.63
TRAPPC9-213ENST00000522504 IGHV4-28A0A0C4DH34 117 aa11.08□□□□□ -0.64
TRAPPC9-213ENST00000522504 A0A1B0GVY2 172 aa11.08□□□□□ -0.64
TRAPPC9-213ENST00000522504 XRCC3O43542 346 aa11.08□□□□□ -0.64
TRAPPC9-213ENST00000522504 CBX5P45973 191 aa11.08□□□□□ -0.64
TRAPPC9-213ENST00000522504 CLVS1Q8IUQ0 354 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC9-213ENST00000522504 CMTM3Q96MX0 182 aa11.08□□□□□ -0.64
TRAPPC9-213ENST00000522504 TXN2Q99757 166 aa11.08□□□□□ -0.64
TRAPPC9-213ENST00000522504 NAA50Q9GZZ1 169 aaKnown RBP11.08□□□□□ -0.64
TRAPPC9-213ENST00000522504 DIABLOQ9NR28 239 aa11.08□□□□□ -0.64
TRAPPC9-213ENST00000522504 ANAPC10Q9UM13 185 aa11.08□□□□□ -0.64
TRAPPC9-213ENST00000522504 HSPG2P98160 4391 aa11.08□□□□□ -0.64
TRAPPC9-213ENST00000522504 IGKV1-39P01597 117 aa11.07□□□□□ -0.64
TRAPPC9-213ENST00000522504 IGKV1D-39P04432 117 aa11.07□□□□□ -0.64
TRAPPC9-213ENST00000522504 HLA-DMBP28068 263 aa11.07□□□□□ -0.64
TRAPPC9-213ENST00000522504 LSM3P62310 102 aaKnown RBP11.07□□□□□ -0.64
TRAPPC9-213ENST00000522504 Q6ZTC4 211 aa11.07□□□□□ -0.64
TRAPPC9-213ENST00000522504 PINX1Q96BK5 328 aaKnown RBP11.07□□□□□ -0.64
TRAPPC9-213ENST00000522504 SEC22AQ96IW7 307 aa11.07□□□□□ -0.64
TRAPPC9-213ENST00000522504 HRH4Q9H3N8 390 aa11.07□□□□□ -0.64
TRAPPC9-213ENST00000522504 ZFAND3Q9H8U3 227 aa11.07□□□□□ -0.64
TRAPPC9-213ENST00000522504 IFT46Q9NQC8 304 aa11.07□□□□□ -0.64
TRAPPC9-213ENST00000522504 FKBP11Q9NYL4 201 aa11.07□□□□□ -0.64
TRAPPC9-213ENST00000522504 ELOA3CA0A087WX78 387 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC9-213ENST00000522504 CCDC160A6NGH7 325 aa11.06□□□□□ -0.64
TRAPPC9-213ENST00000522504 GPR31O00270 319 aa11.06□□□□□ -0.64
TRAPPC9-213ENST00000522504 ST8SIA3O43173 380 aa11.06□□□□□ -0.64
TRAPPC9-213ENST00000522504 NOL3O60936 208 aaKnown RBP11.06□□□□□ -0.64
TRAPPC9-213ENST00000522504 C4BPBP20851 252 aa11.06□□□□□ -0.64
TRAPPC9-213ENST00000522504 PAFAH1B2P68402 229 aa11.06□□□□□ -0.64
TRAPPC9-213ENST00000522504 PHLDA2Q53GA4 152 aa11.06□□□□□ -0.64
TRAPPC9-213ENST00000522504 ZNF114Q8NC26 417 aa11.06□□□□□ -0.64
TRAPPC9-213ENST00000522504 BORCS5Q969J3 196 aa11.06□□□□□ -0.64
TRAPPC9-213ENST00000522504 X6R8D5 127 aa11.06□□□□□ -0.64
TRAPPC9-213ENST00000522504 AGRNO00468 2067 aa11.05□□□□□ -0.64
TRAPPC9-213ENST00000522504 A0A1B0GU03 582 aa11.05□□□□□ -0.64
TRAPPC9-213ENST00000522504 C11orf94C9JXX5 98 aa11.05□□□□□ -0.64
TRAPPC9-213ENST00000522504 DNASE2O00115 360 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC9-213ENST00000522504 GNG7O60262 68 aa11.05□□□□□ -0.64
TRAPPC9-213ENST00000522504 GABARAPO95166 117 aa11.05□□□□□ -0.64
TRAPPC9-213ENST00000522504 NAT1P18440 290 aa11.05□□□□□ -0.64
TRAPPC9-213ENST00000522504 TGFBR1P36897 503 aa11.05□□□□□ -0.64
TRAPPC9-213ENST00000522504 RPL11P62913 178 aaKnown RBP11.05□□□□□ -0.64
TRAPPC9-213ENST00000522504 PRCDQ00LT1 54 aa11.05□□□□□ -0.64
TRAPPC9-213ENST00000522504 IZUMO4Q1ZYL8 232 aa11.05□□□□□ -0.64
TRAPPC9-213ENST00000522504 SPINK9Q5DT21 86 aa11.05□□□□□ -0.64
TRAPPC9-213ENST00000522504 TRPT1Q86TN4 253 aaKnown RBP11.05□□□□□ -0.64
TRAPPC9-213ENST00000522504 LYSMD2Q8IV50 215 aa11.05□□□□□ -0.64
TRAPPC9-213ENST00000522504 CMTM1Q8IZ96 169 aa11.05□□□□□ -0.64
TRAPPC9-213ENST00000522504 PUS1Q9Y606 427 aaKnown RBP eCLIP11.05□□□□□ -0.64
TRAPPC9-213ENST00000522504 IGHV4-4A0A075B6R2 117 aa11.04□□□□□ -0.64
TRAPPC9-213ENST00000522504 KNCNA6PVL3 124 aa11.04□□□□□ -0.64
TRAPPC9-213ENST00000522504 VBP1P61758 197 aa11.04□□□□□ -0.64
TRAPPC9-213ENST00000522504 NCS1P62166 190 aa11.04□□□□□ -0.64
TRAPPC9-213ENST00000522504 STHQ8IWL8 128 aa11.04□□□□□ -0.64
TRAPPC9-213ENST00000522504 OR5H2Q8NGV7 314 aa11.04□□□□□ -0.64
TRAPPC9-213ENST00000522504 TSC22D3Q99576 134 aa11.04□□□□□ -0.64
TRAPPC9-213ENST00000522504 GINS3Q9BRX5 216 aa11.04□□□□□ -0.64
TRAPPC9-213ENST00000522504 SCRT1Q9BWW7 348 aa11.04□□□□□ -0.64
TRAPPC9-213ENST00000522504 CLEC5AQ9NY25 188 aa11.04□□□□□ -0.64
TRAPPC9-213ENST00000522504 MRPL36Q9P0J6 103 aaKnown RBP11.04□□□□□ -0.64
TRAPPC9-213ENST00000522504 RABAC1Q9UI14 185 aa11.04□□□□□ -0.64
TRAPPC9-213ENST00000522504 TRAV2A0A0B4J234 112 aa11.03□□□□□ -0.64
TRAPPC9-213ENST00000522504 ZNF705EA8MWA4 302 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC9-213ENST00000522504 CD5P06127 495 aa11.03□□□□□ -0.64
TRAPPC9-213ENST00000522504 EIF4EP06730 217 aaKnown RBP11.03□□□□□ -0.64
TRAPPC9-213ENST00000522504 HRH1P35367 487 aa11.03□□□□□ -0.64
TRAPPC9-213ENST00000522504 TMBIM6P55061 237 aa11.03□□□□□ -0.64
TRAPPC9-213ENST00000522504 TAS2R20P59543 309 aa11.03□□□□□ -0.64
TRAPPC9-213ENST00000522504 HSPE1P61604 102 aaKnown RBP11.03□□□□□ -0.64
TRAPPC9-213ENST00000522504 CTF1Q16619 201 aa11.03□□□□□ -0.64
TRAPPC9-213ENST00000522504 TBC1D26Q86UD7 250 aa11.03□□□□□ -0.64
TRAPPC9-213ENST00000522504 DUSP18Q8NEJ0 188 aa11.03□□□□□ -0.64
TRAPPC9-213ENST00000522504 OR4A16Q8NH70 328 aa11.03□□□□□ -0.64
TRAPPC9-213ENST00000522504 RAB2BQ8WUD1 216 aa11.03□□□□□ -0.64
TRAPPC9-213ENST00000522504 MRGPRFQ96AM1 343 aa11.03□□□□□ -0.64
TRAPPC9-213ENST00000522504 CELA1Q9UNI1 258 aa11.03□□□□□ -0.64
TRAPPC9-213ENST00000522504 TRAV10A0A0B4J240 114 aa11.02□□□□□ -0.65
TRAPPC9-213ENST00000522504 SMIM31A0A1B0GVY4 71 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms