RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 C9orf172C9J069 976 aa11.54□□□□□ -0.56
SYNPO-205ENST00000522122 M0R3E3 92 aa11.54□□□□□ -0.56
SYNPO-205ENST00000522122 WDR82Q6UXN9 313 aa11.54□□□□□ -0.56
SYNPO-205ENST00000522122 HIST1H2BLQ99880 126 aa11.54□□□□□ -0.56
SYNPO-205ENST00000522122 VSIRQ9H7M9 311 aa11.54□□□□□ -0.56
SYNPO-205ENST00000522122 ZNF581Q9P0T4 197 aa11.54□□□□□ -0.56
SYNPO-205ENST00000522122 NOTCH4Q99466 2003 aa11.54□□□□□ -0.56
SYNPO-205ENST00000522122 LOC105371242A0A075B767 164 aa11.54□□□□□ -0.56
SYNPO-205ENST00000522122 NAPSAO96009 420 aa11.54□□□□□ -0.56
SYNPO-205ENST00000522122 SAPCD1Q5SSQ6 148 aa11.54□□□□□ -0.56
SYNPO-205ENST00000522122 LYPD6BQ8NI32 183 aa11.54□□□□□ -0.56
SYNPO-205ENST00000522122 RELQ04864 619 aaPredicted RBP11.54□□□□□ -0.56
SYNPO-205ENST00000522122 SPSB3Q6PJ21 355 aa11.54□□□□□ -0.56
SYNPO-205ENST00000522122 LYPD6Q86Y78 171 aa11.54□□□□□ -0.56
SYNPO-205ENST00000522122 PINLYPA6NC86 204 aa11.53□□□□□ -0.56
SYNPO-205ENST00000522122 FOXG1P55316 489 aaPredicted RBP11.53□□□□□ -0.56
SYNPO-205ENST00000522122 MORN2Q502X0 79 aa11.53□□□□□ -0.56
SYNPO-205ENST00000522122 TM4SF20Q53R12 229 aa11.53□□□□□ -0.56
SYNPO-205ENST00000522122 OR52E5Q8NH55 327 aa11.53□□□□□ -0.56
SYNPO-205ENST00000522122 RBFOX2O43251 390 aaKnown RBP eCLIP11.53□□□□□ -0.56
SYNPO-205ENST00000522122 SFTPCP11686 197 aa11.53□□□□□ -0.56
SYNPO-205ENST00000522122 CX3CL1P78423 397 aa11.53□□□□□ -0.56
SYNPO-205ENST00000522122 MBNL2Q5VZF2 373 aaKnown RBP11.53□□□□□ -0.56
SYNPO-205ENST00000522122 GGNQ86UU5 652 aa11.53□□□□□ -0.56
SYNPO-205ENST00000522122 MRPL20Q9BYC9 149 aaKnown RBP11.53□□□□□ -0.56
SYNPO-205ENST00000522122 FBXL15Q9H469 300 aa11.53□□□□□ -0.56
SYNPO-205ENST00000522122 LINC00312Q9Y6C7 94 aa11.53□□□□□ -0.56
SYNPO-205ENST00000522122 CACNA1HO95180 2353 aa11.53□□□□□ -0.56
SYNPO-205ENST00000522122 IGHV3-35A0A0C4DH35 117 aa11.53□□□□□ -0.56
SYNPO-205ENST00000522122 C1QTNF9P0C862 333 aa11.53□□□□□ -0.56
SYNPO-205ENST00000522122 FABP2P12104 132 aa11.53□□□□□ -0.56
SYNPO-205ENST00000522122 APOBEC3AP31941 199 aaPredicted RBP11.53□□□□□ -0.56
SYNPO-205ENST00000522122 JOSD1Q15040 202 aaPredicted RBP11.53□□□□□ -0.56
SYNPO-205ENST00000522122 RNASEH2CQ8TDP1 164 aaKnown RBP11.53□□□□□ -0.56
SYNPO-205ENST00000522122 WDR83OSQ9Y284 106 aa11.53□□□□□ -0.56
SYNPO-205ENST00000522122 RFNGQ9Y644 331 aa11.53□□□□□ -0.56
SYNPO-205ENST00000522122 PI4KAP42356 2102 aa11.53□□□□□ -0.56
SYNPO-205ENST00000522122 IGHV2-5P01817 119 aa11.53□□□□□ -0.56
SYNPO-205ENST00000522122 GFI1BQ5VTD9 330 aa11.53□□□□□ -0.56
SYNPO-205ENST00000522122 AGMATQ9BSE5 352 aa11.53□□□□□ -0.56
SYNPO-205ENST00000522122 WNT10AQ9GZT5 417 aa11.53□□□□□ -0.56
SYNPO-205ENST00000522122 FOXI3A8MTJ6 420 aaPredicted RBP11.52□□□□□ -0.56
SYNPO-205ENST00000522122 NTN3O00634 580 aaPredicted RBP11.52□□□□□ -0.56
SYNPO-205ENST00000522122 PYY3Q5JQD4 70 aa11.52□□□□□ -0.56
SYNPO-205ENST00000522122 OR1N2Q8NGR9 330 aa11.52□□□□□ -0.56
SYNPO-205ENST00000522122 GCSHP23434 173 aa11.52□□□□□ -0.57
SYNPO-205ENST00000522122 UPK2O00526 184 aa11.52□□□□□ -0.57
SYNPO-205ENST00000522122 SS18L1O75177 396 aaPredicted RBP11.52□□□□□ -0.57
SYNPO-205ENST00000522122 KCNS1Q96KK3 526 aa11.52□□□□□ -0.57
SYNPO-205ENST00000522122 NDUFAF3Q9BU61 184 aa11.52□□□□□ -0.57
SYNPO-205ENST00000522122 PKDREJQ9NTG1 2253 aa11.52□□□□□ -0.57
SYNPO-205ENST00000522122 GFRA1P56159 465 aa11.52□□□□□ -0.57
SYNPO-205ENST00000522122 CLEC2AQ6UVW9 174 aa11.52□□□□□ -0.57
SYNPO-205ENST00000522122 PARD6GQ9BYG4 376 aaPredicted RBP11.52□□□□□ -0.57
SYNPO-205ENST00000522122 DPM3Q9P2X0 92 aa11.52□□□□□ -0.57
SYNPO-205ENST00000522122 PHLDA3Q9Y5J5 127 aa11.52□□□□□ -0.57
SYNPO-205ENST00000522122 SAA2-SAA4A0A096LPE2 208 aa11.51□□□□□ -0.57
SYNPO-205ENST00000522122 TRBV6-6A0A0A6YYG2 114 aa11.51□□□□□ -0.57
SYNPO-205ENST00000522122 TMEM238LA0A1B0GVL6 79 aa11.51□□□□□ -0.57
SYNPO-205ENST00000522122 A6NJY4 79 aa11.51□□□□□ -0.57
SYNPO-205ENST00000522122 C15orf61A6NNL5 157 aa11.51□□□□□ -0.57
SYNPO-205ENST00000522122 IGLV3-1P01715 115 aa11.51□□□□□ -0.57
SYNPO-205ENST00000522122 SAA2P0DJI9 122 aaPredicted RBP11.51□□□□□ -0.57
SYNPO-205ENST00000522122 DUTP33316 252 aaKnown RBP11.51□□□□□ -0.57
SYNPO-205ENST00000522122 FER1L5A0AVI2 2057 aa11.51□□□□□ -0.57
SYNPO-205ENST00000522122 NUDT3O95989 172 aa11.51□□□□□ -0.57
SYNPO-205ENST00000522122 SAA1P0DJI8 122 aaPredicted RBP11.51□□□□□ -0.57
SYNPO-205ENST00000522122 TFPI2P48307 235 aa11.51□□□□□ -0.57
SYNPO-205ENST00000522122 EBLN2Q6P2I7 272 aa11.51□□□□□ -0.57
SYNPO-205ENST00000522122 TMEM136Q6ZRR5 245 aa11.51□□□□□ -0.57
SYNPO-205ENST00000522122 NPPCP23582 126 aa11.51□□□□□ -0.57
SYNPO-205ENST00000522122 A0A1B0GUT8 65 aa11.5□□□□□ -0.57
SYNPO-205ENST00000522122 C17orf100A8MU93 164 aa11.5□□□□□ -0.57
SYNPO-205ENST00000522122 RAB37Q96AX2 223 aa11.5□□□□□ -0.57
SYNPO-205ENST00000522122 SERF1AO75920 110 aa11.5□□□□□ -0.57
SYNPO-205ENST00000522122 C14orf144Q96I85 54 aa11.5□□□□□ -0.57
SYNPO-205ENST00000522122 GPR82Q96P67 336 aa11.5□□□□□ -0.57
SYNPO-205ENST00000522122 MUC22E2RYF6 1773 aaPredicted RBP11.5□□□□□ -0.57
SYNPO-205ENST00000522122 LINC01560Q8TB33 94 aa11.5□□□□□ -0.57
SYNPO-205ENST00000522122 DYNLRB2Q8TF09 96 aa11.5□□□□□ -0.57
SYNPO-205ENST00000522122 TFF1P04155 84 aa11.5□□□□□ -0.57
SYNPO-205ENST00000522122 CCL3L1P16619 93 aa11.5□□□□□ -0.57
SYNPO-205ENST00000522122 TCF23Q7RTU1 214 aa11.5□□□□□ -0.57
SYNPO-205ENST00000522122 FAM19A2Q8N3H0 131 aa11.5□□□□□ -0.57
SYNPO-205ENST00000522122 SOX21Q9Y651 276 aaPredicted RBP11.5□□□□□ -0.57
SYNPO-205ENST00000522122 HEATR1Q9H583 2144 aaKnown RBP11.5□□□□□ -0.57
SYNPO-205ENST00000522122 DOCK8Q8NF50 2099 aa11.49□□□□□ -0.57
SYNPO-205ENST00000522122 IZUMO1RA6ND01 250 aa11.49□□□□□ -0.57
SYNPO-205ENST00000522122 H3BVH4 76 aa11.49□□□□□ -0.57
SYNPO-205ENST00000522122 TMPRSS3P57727 454 aa11.49□□□□□ -0.57
SYNPO-205ENST00000522122 HGFACQ04756 655 aa11.49□□□□□ -0.57
SYNPO-205ENST00000522122 DOCK7Q96N67 2140 aa11.49□□□□□ -0.57
SYNPO-205ENST00000522122 BSPH1Q075Z2 132 aa11.49□□□□□ -0.57
SYNPO-205ENST00000522122 OCC1Q8TAD7 63 aa11.49□□□□□ -0.57
SYNPO-205ENST00000522122 RNASE7Q9H1E1 156 aaKnown RBP11.49□□□□□ -0.57
SYNPO-205ENST00000522122 RPP21Q9H633 154 aaKnown RBP11.49□□□□□ -0.57
SYNPO-205ENST00000522122 CHODLQ9H9P2 273 aa11.49□□□□□ -0.57
SYNPO-205ENST00000522122 HEATR5AQ86XA9 2040 aa11.49□□□□□ -0.57
SYNPO-205ENST00000522122 IGHV2-70P01814 119 aa11.49□□□□□ -0.57
SYNPO-205ENST00000522122 OR9G9P0C7N8 305 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms