RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 WFDC1Q9HC57 220 aa16.81■□□□□ 0.28
R3HCC1-208ENST00000522012 TNCP24821 2201 aa16.81■□□□□ 0.28
R3HCC1-208ENST00000522012 SONP18583 2426 aaKnown RBP16.81■□□□□ 0.28
R3HCC1-208ENST00000522012 HIVEP2P31629 2446 aa16.81■□□□□ 0.28
R3HCC1-208ENST00000522012 PRH1P02810 166 aa16.8■□□□□ 0.28
R3HCC1-208ENST00000522012 IGF1P05019 195 aa16.8■□□□□ 0.28
R3HCC1-208ENST00000522012 HILS1P60008 231 aa16.8■□□□□ 0.28
R3HCC1-208ENST00000522012 STPG2Q8N412 459 aa16.8■□□□□ 0.28
R3HCC1-208ENST00000522012 NOL4LQ96MY1 436 aaPredicted RBP16.8■□□□□ 0.28
R3HCC1-208ENST00000522012 FAM181BA6NEQ2 426 aa16.8■□□□□ 0.28
R3HCC1-208ENST00000522012 AP4M1O00189 453 aa16.8■□□□□ 0.28
R3HCC1-208ENST00000522012 CRIP2P52943 208 aaPredicted RBP16.8■□□□□ 0.28
R3HCC1-208ENST00000522012 FAM110DQ8TAY7 271 aaPredicted RBP16.8■□□□□ 0.28
R3HCC1-208ENST00000522012 RNASEH2CQ8TDP1 164 aaKnown RBP16.8■□□□□ 0.28
R3HCC1-208ENST00000522012 JMJD8Q96S16 334 aa16.8■□□□□ 0.28
R3HCC1-208ENST00000522012 ZNF471Q9BX82 626 aaPredicted RBP16.8■□□□□ 0.28
R3HCC1-208ENST00000522012 ZNF702PQ9H963 129 aa16.8■□□□□ 0.28
R3HCC1-208ENST00000522012 PRSS46E5RG02 174 aa16.79■□□□□ 0.28
R3HCC1-208ENST00000522012 ATP6V1FQ16864 119 aa16.79■□□□□ 0.28
R3HCC1-208ENST00000522012 TMEM95Q3KNT9 176 aa16.79■□□□□ 0.28
R3HCC1-208ENST00000522012 OR1L6Q8NGR2 347 aa16.79■□□□□ 0.28
R3HCC1-208ENST00000522012 ATP5SQ99766 215 aa16.79■□□□□ 0.28
R3HCC1-208ENST00000522012 CYTL1Q9NRR1 136 aa16.79■□□□□ 0.28
R3HCC1-208ENST00000522012 DMRT1Q9Y5R6 373 aa16.79■□□□□ 0.28
R3HCC1-208ENST00000522012 DFFBO76075 338 aa16.78■□□□□ 0.28
R3HCC1-208ENST00000522012 RNASE1P07998 156 aaKnown RBP16.78■□□□□ 0.28
R3HCC1-208ENST00000522012 OPRK1P41145 380 aa16.78■□□□□ 0.28
R3HCC1-208ENST00000522012 UBA52P62987 128 aaKnown RBP16.78■□□□□ 0.28
R3HCC1-208ENST00000522012 MLANAQ16655 118 aa16.78■□□□□ 0.28
R3HCC1-208ENST00000522012 RPL7L1Q6DKI1 246 aaKnown RBP16.78■□□□□ 0.28
R3HCC1-208ENST00000522012 PVRIGQ6DKI7 326 aa16.78■□□□□ 0.28
R3HCC1-208ENST00000522012 ZNF355PQ9NSJ1 428 aa16.78■□□□□ 0.28
R3HCC1-208ENST00000522012 BORCS7-ASMTA0A0B4J1R7 106 aa16.77■□□□□ 0.28
R3HCC1-208ENST00000522012 SMCO3A2RU48 225 aa16.77■□□□□ 0.28
R3HCC1-208ENST00000522012 CORTO00230 105 aa16.77■□□□□ 0.28
R3HCC1-208ENST00000522012 CYB5BO43169 146 aa16.77■□□□□ 0.28
R3HCC1-208ENST00000522012 CRYBA1P05813 215 aa16.77■□□□□ 0.28
R3HCC1-208ENST00000522012 TMEM147Q9BVK8 224 aa16.77■□□□□ 0.28
R3HCC1-208ENST00000522012 DLK1P80370 383 aa16.76■□□□□ 0.27
R3HCC1-208ENST00000522012 C19orf54Q5BKX5 351 aa16.76■□□□□ 0.27
R3HCC1-208ENST00000522012 SLC51BQ86UW2 128 aa16.76■□□□□ 0.27
R3HCC1-208ENST00000522012 GGACTQ9BVM4 153 aa16.76■□□□□ 0.27
R3HCC1-208ENST00000522012 UQCC1Q9NVA1 299 aa16.76■□□□□ 0.27
R3HCC1-208ENST00000522012 ANK3Q12955 4377 aaKnown RBP16.76■□□□□ 0.27
R3HCC1-208ENST00000522012 PLXNB1O43157 2135 aa16.75■□□□□ 0.27
R3HCC1-208ENST00000522012 JTBO76095 146 aa16.75■□□□□ 0.27
R3HCC1-208ENST00000522012 IFNA5P01569 189 aa16.75■□□□□ 0.27
R3HCC1-208ENST00000522012 CD69Q07108 199 aa16.75■□□□□ 0.27
R3HCC1-208ENST00000522012 ZNF266Q14584 549 aa16.75■□□□□ 0.27
R3HCC1-208ENST00000522012 FANCD2OSQ96PS1 177 aa16.75■□□□□ 0.27
R3HCC1-208ENST00000522012 FNDC4Q9H6D8 234 aaPredicted RBP16.75■□□□□ 0.27
R3HCC1-208ENST00000522012 IGLV11-55A0A075B6I3 123 aa16.75■□□□□ 0.27
R3HCC1-208ENST00000522012 IGHV3-21A0A0B4J1V1 117 aa16.75■□□□□ 0.27
R3HCC1-208ENST00000522012 UBE2L5PA0A1B0GUS4 154 aa16.75■□□□□ 0.27
R3HCC1-208ENST00000522012 IGHV3-48P01763 117 aa16.75■□□□□ 0.27
R3HCC1-208ENST00000522012 GPX4P36969 197 aaPredicted RBP16.75■□□□□ 0.27
R3HCC1-208ENST00000522012 EXOSC2Q13868 293 aaKnown RBP16.75■□□□□ 0.27
R3HCC1-208ENST00000522012 SLC16A13Q7RTY0 426 aa16.75■□□□□ 0.27
R3HCC1-208ENST00000522012 Q8N2B8 174 aa16.75■□□□□ 0.27
R3HCC1-208ENST00000522012 TAF15Q92804 592 aaKnown RBP eCLIP16.75■□□□□ 0.27
R3HCC1-208ENST00000522012 MXRA5Q9NR99 2828 aa16.74■□□□□ 0.27
R3HCC1-208ENST00000522012 RPS10-NUDT3A0A1W2PQS6 291 aa16.74■□□□□ 0.27
R3HCC1-208ENST00000522012 TCF21O43680 179 aa16.74■□□□□ 0.27
R3HCC1-208ENST00000522012 SOX15O60248 233 aa16.74■□□□□ 0.27
R3HCC1-208ENST00000522012 MT-CO2P00403 227 aa16.74■□□□□ 0.27
R3HCC1-208ENST00000522012 HIST1H1BP16401 226 aaKnown RBP16.74■□□□□ 0.27
R3HCC1-208ENST00000522012 ETFRF1Q6IPR1 90 aa16.74■□□□□ 0.27
R3HCC1-208ENST00000522012 OR2T6Q8NHC8 308 aa16.74■□□□□ 0.27
R3HCC1-208ENST00000522012 CACNG8Q8WXS5 425 aa16.74■□□□□ 0.27
R3HCC1-208ENST00000522012 MS4A10Q96PG2 267 aa16.74■□□□□ 0.27
R3HCC1-208ENST00000522012 ZNF580Q9UK33 172 aa16.74■□□□□ 0.27
R3HCC1-208ENST00000522012 OR2J3O76001 311 aa16.73■□□□□ 0.27
R3HCC1-208ENST00000522012 PPIFP30405 207 aaKnown RBP16.73■□□□□ 0.27
R3HCC1-208ENST00000522012 AKR1C1Q04828 323 aa16.73■□□□□ 0.27
R3HCC1-208ENST00000522012 VWC2Q2TAL6 325 aa16.73■□□□□ 0.27
R3HCC1-208ENST00000522012 Q6ZSV7 163 aa16.73■□□□□ 0.27
R3HCC1-208ENST00000522012 SCGB1C1Q8TD33 95 aa16.73■□□□□ 0.27
R3HCC1-208ENST00000522012 SLC35E1Q96K37 410 aa16.73■□□□□ 0.27
R3HCC1-208ENST00000522012 THYN1Q9P016 225 aa16.73■□□□□ 0.27
R3HCC1-208ENST00000522012 FBXL7Q9UJT9 491 aa16.73■□□□□ 0.27
R3HCC1-208ENST00000522012 I3L2K1 104 aa16.72■□□□□ 0.27
R3HCC1-208ENST00000522012 TPT1P13693 172 aaKnown RBP16.72■□□□□ 0.27
R3HCC1-208ENST00000522012 RPL15P61313 204 aaKnown RBP16.72■□□□□ 0.27
R3HCC1-208ENST00000522012 EIF5AP63241 154 aaKnown RBP16.72■□□□□ 0.27
R3HCC1-208ENST00000522012 DEFA5Q01523 94 aa16.72■□□□□ 0.27
R3HCC1-208ENST00000522012 GAMTQ14353 236 aa16.72■□□□□ 0.27
R3HCC1-208ENST00000522012 UBAC2Q8NBM4 344 aa16.72■□□□□ 0.27
R3HCC1-208ENST00000522012 ACY3Q96HD9 319 aa16.72■□□□□ 0.27
R3HCC1-208ENST00000522012 GON7Q9BXV9 100 aa16.72■□□□□ 0.27
R3HCC1-208ENST00000522012 NPVFQ9HCQ7 196 aa16.72■□□□□ 0.27
R3HCC1-208ENST00000522012 TSPAN9O75954 239 aa16.71■□□□□ 0.27
R3HCC1-208ENST00000522012 NDUFB8O95169 186 aa16.71■□□□□ 0.27
R3HCC1-208ENST00000522012 RHOGP84095 191 aa16.71■□□□□ 0.27
R3HCC1-208ENST00000522012 ZNF329Q86UD4 541 aa16.71■□□□□ 0.27
R3HCC1-208ENST00000522012 BAP18Q8IXM2 172 aa16.71■□□□□ 0.27
R3HCC1-208ENST00000522012 HSD17B11Q8NBQ5 300 aa16.71■□□□□ 0.27
R3HCC1-208ENST00000522012 ST8SIA2Q92186 375 aa16.71■□□□□ 0.27
R3HCC1-208ENST00000522012 FNDC10F2Z333 226 aa16.7■□□□□ 0.26
R3HCC1-208ENST00000522012 K7EIM0 57 aa16.7■□□□□ 0.26
R3HCC1-208ENST00000522012 FGF7P21781 194 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms