RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 MARC2Q969Z3 335 aa13.46□□□□□ -0.25
TRAPPC9-211ENST00000521700 NEURL2Q9BR09 285 aa13.46□□□□□ -0.25
TRAPPC9-211ENST00000521700 MCUBQ9NWR8 336 aa13.46□□□□□ -0.25
TRAPPC9-211ENST00000521700 MRPL27Q9P0M9 148 aaKnown RBP13.46□□□□□ -0.25
TRAPPC9-211ENST00000521700 V9GYH0 126 aa13.46□□□□□ -0.25
TRAPPC9-211ENST00000521700 ZNF701M0R085 212 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC9-211ENST00000521700 MT-CO2P00403 227 aa13.45□□□□□ -0.26
TRAPPC9-211ENST00000521700 IGHV3-48P01763 117 aa13.45□□□□□ -0.26
TRAPPC9-211ENST00000521700 CTSGP08311 255 aa13.45□□□□□ -0.26
TRAPPC9-211ENST00000521700 PYDC2Q56P42 97 aa13.45□□□□□ -0.26
TRAPPC9-211ENST00000521700 TMEM61Q8N0U2 210 aa13.45□□□□□ -0.26
TRAPPC9-211ENST00000521700 SLC35G3Q8N808 338 aa13.45□□□□□ -0.26
TRAPPC9-211ENST00000521700 RNASE11Q8TAA1 199 aaKnown RBP13.45□□□□□ -0.26
TRAPPC9-211ENST00000521700 TRIM63Q969Q1 353 aa13.45□□□□□ -0.26
TRAPPC9-211ENST00000521700 TMEM230Q96A57 120 aa13.45□□□□□ -0.26
TRAPPC9-211ENST00000521700 ZNF414Q96IQ9 312 aa13.45□□□□□ -0.26
TRAPPC9-211ENST00000521700 RCHY1Q96PM5 261 aa13.45□□□□□ -0.26
TRAPPC9-211ENST00000521700 PDCD10Q9BUL8 212 aa13.45□□□□□ -0.26
TRAPPC9-211ENST00000521700 TUBA4BQ9H853 241 aa13.45□□□□□ -0.26
TRAPPC9-211ENST00000521700 NDUFA4O00483 81 aa13.44□□□□□ -0.26
TRAPPC9-211ENST00000521700 FCGR2BP31994 310 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC9-211ENST00000521700 S100A5P33763 92 aa13.44□□□□□ -0.26
TRAPPC9-211ENST00000521700 SNCAP37840 140 aa13.44□□□□□ -0.26
TRAPPC9-211ENST00000521700 MFAP4P55083 255 aa13.44□□□□□ -0.26
TRAPPC9-211ENST00000521700 KLF9Q13886 244 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC9-211ENST00000521700 ZNF79Q15937 498 aa13.44□□□□□ -0.26
TRAPPC9-211ENST00000521700 BTNL8Q6UX41 500 aa13.44□□□□□ -0.26
TRAPPC9-211ENST00000521700 CCDC190Q86UF4 302 aa13.44□□□□□ -0.26
TRAPPC9-211ENST00000521700 FAM219AQ8IW50 185 aa13.44□□□□□ -0.26
TRAPPC9-211ENST00000521700 RBPMSQ93062 196 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-211ENST00000521700 PINX1Q96BK5 328 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-211ENST00000521700 GPR146Q96CH1 333 aa13.44□□□□□ -0.26
TRAPPC9-211ENST00000521700 SCGB3A2Q96PL1 93 aa13.44□□□□□ -0.26
TRAPPC9-211ENST00000521700 TXN2Q99757 166 aa13.44□□□□□ -0.26
TRAPPC9-211ENST00000521700 TM2D3Q9BRN9 247 aa13.44□□□□□ -0.26
TRAPPC9-211ENST00000521700 ZMAT4Q9H898 229 aa13.44□□□□□ -0.26
TRAPPC9-211ENST00000521700 GAR1Q9NY12 217 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-211ENST00000521700 TMEM56-RWDD3S4R434 201 aa13.44□□□□□ -0.26
TRAPPC9-211ENST00000521700 AARDQ4LEZ3 155 aa13.43□□□□□ -0.26
TRAPPC9-211ENST00000521700 TMEM268Q5VZI3 342 aa13.43□□□□□ -0.26
TRAPPC9-211ENST00000521700 PVRIGQ6DKI7 326 aa13.43□□□□□ -0.26
TRAPPC9-211ENST00000521700 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC9-211ENST00000521700 KCNIP3Q9Y2W7 256 aa13.43□□□□□ -0.26
TRAPPC9-211ENST00000521700 STAB2Q8WWQ8 2551 aa13.43□□□□□ -0.26
TRAPPC9-211ENST00000521700 IGHV3OR16-8A0A075B7F1 116 aa13.42□□□□□ -0.26
TRAPPC9-211ENST00000521700 NUPL2O15504 423 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-211ENST00000521700 SCAF4O95104 1147 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-211ENST00000521700 RNASE2P10153 161 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-211ENST00000521700 HOXA1P49639 335 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC9-211ENST00000521700 TMEM187Q14656 261 aa13.42□□□□□ -0.26
TRAPPC9-211ENST00000521700 HAGHQ16775 308 aa13.42□□□□□ -0.26
TRAPPC9-211ENST00000521700 LINC00322Q6ZN03 302 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC9-211ENST00000521700 DEFB125Q8N687 156 aa13.42□□□□□ -0.26
TRAPPC9-211ENST00000521700 GALNT14Q96FL9 552 aa13.42□□□□□ -0.26
TRAPPC9-211ENST00000521700 C20orf24Q9BUV8 137 aa13.42□□□□□ -0.26
TRAPPC9-211ENST00000521700 WFDC10AQ9H1F0 79 aa13.42□□□□□ -0.26
TRAPPC9-211ENST00000521700 DAZ1Q9NQZ3 744 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-211ENST00000521700 PRR13Q9NZ81 148 aa13.42□□□□□ -0.26
TRAPPC9-211ENST00000521700 TENM3Q9P273 2699 aa13.42□□□□□ -0.26
TRAPPC9-211ENST00000521700 TRAV25A0A0B4J276 109 aa13.41□□□□□ -0.26
TRAPPC9-211ENST00000521700 OR11H12B2RN74 326 aa13.41□□□□□ -0.26
TRAPPC9-211ENST00000521700 K7EMT4 169 aa13.41□□□□□ -0.26
TRAPPC9-211ENST00000521700 ZNF207O43670 478 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-211ENST00000521700 AKR1C4P17516 323 aa13.41□□□□□ -0.26
TRAPPC9-211ENST00000521700 FAUP35544 74 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-211ENST00000521700 SPCS3P61009 180 aa13.41□□□□□ -0.26
TRAPPC9-211ENST00000521700 SUPT4H1P63272 117 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-211ENST00000521700 TOMM5Q8N4H5 51 aa13.41□□□□□ -0.26
TRAPPC9-211ENST00000521700 OR52E5Q8NH55 327 aa13.41□□□□□ -0.26
TRAPPC9-211ENST00000521700 ENY2Q9NPA8 101 aa13.41□□□□□ -0.26
TRAPPC9-211ENST00000521700 CACNG5Q9UF02 275 aa13.41□□□□□ -0.26
TRAPPC9-211ENST00000521700 GNG7O60262 68 aa13.4□□□□□ -0.26
TRAPPC9-211ENST00000521700 SUB1P53999 127 aaKnown RBP eCLIP13.4□□□□□ -0.26
TRAPPC9-211ENST00000521700 AP3S2P59780 193 aa13.4□□□□□ -0.26
TRAPPC9-211ENST00000521700 RELQ04864 619 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-211ENST00000521700 RBPMS2Q6ZRY4 209 aaKnown RBP13.4□□□□□ -0.26
TRAPPC9-211ENST00000521700 IL22RA2Q969J5 263 aa13.4□□□□□ -0.26
TRAPPC9-211ENST00000521700 C15orf62A8K5M9 175 aa13.39□□□□□ -0.27
TRAPPC9-211ENST00000521700 BSXQ3C1V8 233 aa13.39□□□□□ -0.27
TRAPPC9-211ENST00000521700 SLC16A13Q7RTY0 426 aa13.39□□□□□ -0.27
TRAPPC9-211ENST00000521700 DUSP18Q8NEJ0 188 aa13.39□□□□□ -0.27
TRAPPC9-211ENST00000521700 OR52B4Q8NGK2 314 aa13.39□□□□□ -0.27
TRAPPC9-211ENST00000521700 RBMY1BA6NDE4 496 aaKnown RBP13.38□□□□□ -0.27
TRAPPC9-211ENST00000521700 RBMY1EA6NEQ0 496 aaKnown RBP13.38□□□□□ -0.27
TRAPPC9-211ENST00000521700 CORTO00230 105 aa13.38□□□□□ -0.27
TRAPPC9-211ENST00000521700 YIF1AO95070 293 aa13.38□□□□□ -0.27
TRAPPC9-211ENST00000521700 TMEM50AO95807 157 aa13.38□□□□□ -0.27
TRAPPC9-211ENST00000521700 RBMY1DP0C7P1 496 aaKnown RBP13.38□□□□□ -0.27
TRAPPC9-211ENST00000521700 NPBWR1P48145 328 aa13.38□□□□□ -0.27
TRAPPC9-211ENST00000521700 MLANAQ16655 118 aa13.38□□□□□ -0.27
TRAPPC9-211ENST00000521700 ANKRD55Q3KP44 614 aa13.38□□□□□ -0.27
TRAPPC9-211ENST00000521700 OR10C1Q96KK4 312 aa13.38□□□□□ -0.27
TRAPPC9-211ENST00000521700 FNDC4Q9H6D8 234 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC9-211ENST00000521700 SRD5A3Q9H8P0 318 aa13.38□□□□□ -0.27
TRAPPC9-211ENST00000521700 SMPXQ9UHP9 88 aa13.38□□□□□ -0.27
TRAPPC9-211ENST00000521700 TSPAN4O14817 238 aa13.37□□□□□ -0.27
TRAPPC9-211ENST00000521700 SPANXN2Q5MJ10 180 aa13.37□□□□□ -0.27
TRAPPC9-211ENST00000521700 LYZL2Q7Z4W2 148 aa13.37□□□□□ -0.27
TRAPPC9-211ENST00000521700 DEDD2Q8WXF8 326 aa13.37□□□□□ -0.27
TRAPPC9-211ENST00000521700 SPATA25Q9BR10 227 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms