RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 SRRM4A7MD48 611 aaKnown RBP8.63□□□□□ -1.03
MRPS28-208ENST00000521605 PRSS46E5RG02 174 aa8.63□□□□□ -1.03
MRPS28-208ENST00000521605 H7C2Y5 167 aa8.63□□□□□ -1.03
MRPS28-208ENST00000521605 I3L521 148 aa8.63□□□□□ -1.03
MRPS28-208ENST00000521605 IGLV2-23P01705 113 aa8.63□□□□□ -1.03
MRPS28-208ENST00000521605 HBE1P02100 147 aa8.63□□□□□ -1.03
MRPS28-208ENST00000521605 SAA1P0DJI8 122 aaPredicted RBP8.63□□□□□ -1.03
MRPS28-208ENST00000521605 HTR1DP28221 377 aa8.63□□□□□ -1.03
MRPS28-208ENST00000521605 CHRNA7P36544 502 aa8.63□□□□□ -1.03
MRPS28-208ENST00000521605 OR2B8PP59922 312 aa8.63□□□□□ -1.03
MRPS28-208ENST00000521605 TMEM267Q0VDI3 215 aaPredicted RBP8.63□□□□□ -1.03
MRPS28-208ENST00000521605 CCDC144NLQ6NUI1 221 aa8.63□□□□□ -1.03
MRPS28-208ENST00000521605 Q6ZRG5 221 aa8.63□□□□□ -1.03
MRPS28-208ENST00000521605 THNSL2Q86YJ6 484 aa8.63□□□□□ -1.03
MRPS28-208ENST00000521605 HSD17B11Q8NBQ5 300 aa8.63□□□□□ -1.03
MRPS28-208ENST00000521605 OR1L8Q8NGR8 309 aa8.63□□□□□ -1.03
MRPS28-208ENST00000521605 C16orf95Q9H693 158 aa8.63□□□□□ -1.03
MRPS28-208ENST00000521605 ENY2Q9NPA8 101 aa8.63□□□□□ -1.03
MRPS28-208ENST00000521605 HEYLQ9NQ87 328 aaPredicted RBP8.63□□□□□ -1.03
MRPS28-208ENST00000521605 NDUFA4L2Q9NRX3 87 aa8.63□□□□□ -1.03
MRPS28-208ENST00000521605 KCNIP2Q9NS61 270 aa8.63□□□□□ -1.03
MRPS28-208ENST00000521605 TBL2Q9Y4P3 447 aaKnown RBP8.63□□□□□ -1.03
MRPS28-208ENST00000521605 TRAV3A0A0B4J244 114 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 A0A0U1RQK1 487 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 CD5P06127 495 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 CRYGBP07316 175 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 CAMLGP49069 296 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 HOXA1P49639 335 aaPredicted RBP8.62□□□□□ -1.03
MRPS28-208ENST00000521605 BPIFB3P59826 476 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 RAB2AP61019 212 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 C2orf83Q53S99 150 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 C10orf91Q5T1B1 145 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 AKR1C8PQ5T2L2 129 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 TPTE2P1Q5T6R2 138 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 PVRIGQ6DKI7 326 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 SLC25A24Q6NUK1 477 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 SSX9Q7RTT3 188 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 MMD2Q8IY49 270 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 VKORC1L1Q8N0U8 176 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 SLC24A4Q8NFF2 622 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 PCNPQ8WW12 178 aaKnown RBP8.62□□□□□ -1.03
MRPS28-208ENST00000521605 MBD3L1Q8WWY6 194 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 RPEQ96AT9 228 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 SH3BGRL3Q9H299 93 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 PLEKHA3Q9HB20 300 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 ONECUT1Q9UBC0 465 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 WDR83OSQ9Y284 106 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 FBXO7Q9Y3I1 522 aa8.62□□□□□ -1.03
MRPS28-208ENST00000521605 CENPVL3A0A0U1RRI6 287 aa8.61□□□□□ -1.03
MRPS28-208ENST00000521605 TEX50A0A1B0GTY4 177 aa8.61□□□□□ -1.03
MRPS28-208ENST00000521605 A0A1W2PPI3 338 aa8.61□□□□□ -1.03
MRPS28-208ENST00000521605 C17orf112F2Z3M2 114 aa8.61□□□□□ -1.03
MRPS28-208ENST00000521605 K7EIL1 84 aa8.61□□□□□ -1.03
MRPS28-208ENST00000521605 NXPH3O95157 252 aa8.61□□□□□ -1.03
MRPS28-208ENST00000521605 PRH1P02810 166 aa8.61□□□□□ -1.03
MRPS28-208ENST00000521605 NPY1RP25929 384 aa8.61□□□□□ -1.03
MRPS28-208ENST00000521605 IER3P46695 156 aa8.61□□□□□ -1.03
MRPS28-208ENST00000521605 RPS16P62249 146 aaKnown RBP8.61□□□□□ -1.03
MRPS28-208ENST00000521605 CD69Q07108 199 aa8.61□□□□□ -1.03
MRPS28-208ENST00000521605 NSUN5P1Q3KNT7 163 aa8.61□□□□□ -1.03
MRPS28-208ENST00000521605 HCP5Q6MZN7 132 aa8.61□□□□□ -1.03
MRPS28-208ENST00000521605 ETV3LQ6ZN32 361 aa8.61□□□□□ -1.03
MRPS28-208ENST00000521605 CCDC28AQ8IWP9 274 aa8.61□□□□□ -1.03
MRPS28-208ENST00000521605 ZNF114Q8NC26 417 aa8.61□□□□□ -1.03
MRPS28-208ENST00000521605 CACNG8Q8WXS5 425 aa8.61□□□□□ -1.03
MRPS28-208ENST00000521605 RBMXL1Q96E39 390 aaKnown RBP8.61□□□□□ -1.03
MRPS28-208ENST00000521605 COMMD5Q9GZQ3 224 aa8.61□□□□□ -1.03
MRPS28-208ENST00000521605 SIRPDQ9H106 197 aa8.61□□□□□ -1.03
MRPS28-208ENST00000521605 ZNRD1Q9P1U0 126 aa8.61□□□□□ -1.03
MRPS28-208ENST00000521605 SIGLEC9Q9Y336 463 aa8.61□□□□□ -1.03
MRPS28-208ENST00000521605 TMEM218A2RU14 115 aa8.6□□□□□ -1.03
MRPS28-208ENST00000521605 IFNA10P01566 189 aa8.6□□□□□ -1.03
MRPS28-208ENST00000521605 GPX4P36969 197 aaPredicted RBP8.6□□□□□ -1.03
MRPS28-208ENST00000521605 TAGLN2P37802 199 aaKnown RBP8.6□□□□□ -1.03
MRPS28-208ENST00000521605 SNCAP37840 140 aa8.6□□□□□ -1.03
MRPS28-208ENST00000521605 UBE2E1P51965 193 aa8.6□□□□□ -1.03
MRPS28-208ENST00000521605 ERHP84090 104 aaKnown RBP8.6□□□□□ -1.03
MRPS28-208ENST00000521605 EBI3Q14213 229 aa8.6□□□□□ -1.03
MRPS28-208ENST00000521605 OR8G2PQ6IF36 304 aa8.6□□□□□ -1.03
MRPS28-208ENST00000521605 TMEM182Q6ZP80 229 aaPredicted RBP8.6□□□□□ -1.03
MRPS28-208ENST00000521605 PNKDQ8N490 385 aa8.6□□□□□ -1.03
MRPS28-208ENST00000521605 RNASEH2CQ8TDP1 164 aaKnown RBP8.6□□□□□ -1.03
MRPS28-208ENST00000521605 TMEM170AQ8WVE7 144 aa8.6□□□□□ -1.03
MRPS28-208ENST00000521605 PBDC1Q9BVG4 233 aa8.6□□□□□ -1.03
MRPS28-208ENST00000521605 NPVFQ9HCQ7 196 aa8.6□□□□□ -1.03
MRPS28-208ENST00000521605 KIAA1456Q9P272 454 aa8.6□□□□□ -1.03
MRPS28-208ENST00000521605 CARHSP1Q9Y2V2 147 aaKnown RBP8.6□□□□□ -1.03
MRPS28-208ENST00000521605 LSM4Q9Y4Z0 139 aaKnown RBP8.6□□□□□ -1.03
MRPS28-208ENST00000521605 NOTCH3Q9UM47 2321 aa8.6□□□□□ -1.03
MRPS28-208ENST00000521605 TOX4O94842 621 aa8.59□□□□□ -1.03
MRPS28-208ENST00000521605 H2AFB1P0C5Y9 115 aa8.59□□□□□ -1.03
MRPS28-208ENST00000521605 OPRK1P41145 380 aa8.59□□□□□ -1.03
MRPS28-208ENST00000521605 SUB1P53999 127 aaKnown RBP eCLIP8.59□□□□□ -1.032e-8■■■■■ 44.9
MRPS28-208ENST00000521605 ARF6P62330 175 aa8.59□□□□□ -1.03
MRPS28-208ENST00000521605 DIAPH2-AS1Q14236 149 aa8.59□□□□□ -1.03
MRPS28-208ENST00000521605 PRSS8Q16651 343 aa8.59□□□□□ -1.03
MRPS28-208ENST00000521605 TMEM41BQ5BJD5 291 aa8.59□□□□□ -1.03
MRPS28-208ENST00000521605 ZNF709Q8N972 641 aa8.59□□□□□ -1.03
MRPS28-208ENST00000521605 NPBQ8NG41 125 aa8.59□□□□□ -1.03
MRPS28-208ENST00000521605 FAM213BQ8TBF2 198 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms