RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 C10orf105Q8TEF2 133 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 TMEM106AQ96A25 262 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 DCUN1D1Q96GG9 259 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 C8orf76Q96K31 380 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 SCGB3A1Q96QR1 104 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 TSPAN32Q96QS1 320 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 NIPSNAP1Q9BPW8 284 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 RETNLBQ9BQ08 111 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 YIPF3Q9GZM5 350 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 C11orf68Q9H3H3 251 aaKnown RBP0.74□□□□□ -2.29
PCM1-214ENST00000521338 UBAP1Q9NZ09 502 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 MRPL27Q9P0M9 148 aaKnown RBP0.74□□□□□ -2.29
PCM1-214ENST00000521338 MICAL3Q7RTP6 2002 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 TOPBP1Q92547 1522 aa0.74□□□□□ -2.29
PCM1-214ENST00000521338 PLB1Q6P1J6 1458 aa0.73□□□□□ -2.29
PCM1-214ENST00000521338 TENM3Q9P273 2699 aa0.73□□□□□ -2.29
PCM1-214ENST00000521338 NUP155O75694 1391 aa0.73□□□□□ -2.29
PCM1-214ENST00000521338 MED12LQ86YW9 2145 aa0.73□□□□□ -2.29
PCM1-214ENST00000521338 IGKV2-40A0A087WW87 121 aaPredicted RBP0.73□□□□□ -2.29
PCM1-214ENST00000521338 EXOC1LA0A1B0GW35 172 aa0.73□□□□□ -2.29
PCM1-214ENST00000521338 PQLC2LA1A4F0 135 aa0.73□□□□□ -2.29
PCM1-214ENST00000521338 OR4C46A6NHA9 309 aa0.73□□□□□ -2.29
PCM1-214ENST00000521338 KPNA3O00505 521 aaPredicted RBP0.73□□□□□ -2.29
PCM1-214ENST00000521338 CRYZL1O95825 349 aa0.73□□□□□ -2.29
PCM1-214ENST00000521338 IGKV2D-40P01614 121 aaPredicted RBP0.73□□□□□ -2.29
PCM1-214ENST00000521338 SHBGP04278 402 aa0.73□□□□□ -2.29
PCM1-214ENST00000521338 OMPP47874 163 aa0.73□□□□□ -2.29
PCM1-214ENST00000521338 SURF2Q15527 256 aaPredicted RBP0.73□□□□□ -2.29
PCM1-214ENST00000521338 CLVS1Q8IUQ0 354 aaPredicted RBP0.73□□□□□ -2.29
PCM1-214ENST00000521338 PFN4Q8NHR9 129 aa0.73□□□□□ -2.29
PCM1-214ENST00000521338 H1FXQ92522 213 aaKnown RBP0.73□□□□□ -2.29
PCM1-214ENST00000521338 TOMM6Q96B49 74 aa0.73□□□□□ -2.29
PCM1-214ENST00000521338 PPP1R14BQ96C90 147 aa0.73□□□□□ -2.29
PCM1-214ENST00000521338 GINS4Q9BRT9 223 aa0.73□□□□□ -2.29
PCM1-214ENST00000521338 ULBP3Q9BZM4 244 aa0.73□□□□□ -2.29
PCM1-214ENST00000521338 MED9Q9NWA0 146 aa0.73□□□□□ -2.29
PCM1-214ENST00000521338 CKLFQ9UBR5 152 aa0.73□□□□□ -2.29
PCM1-214ENST00000521338 SOX21Q9Y651 276 aaPredicted RBP0.73□□□□□ -2.29
PCM1-214ENST00000521338 TMEM56-RWDD3S4R434 201 aa0.73□□□□□ -2.29
PCM1-214ENST00000521338 COL6A6A6NMZ7 2263 aa0.73□□□□□ -2.29
PCM1-214ENST00000521338 RP1P56715 2156 aa0.73□□□□□ -2.29
PCM1-214ENST00000521338 ANAPC1Q9H1A4 1944 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 MYO3BQ8WXR4 1341 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 IGKV3-7A0A075B6H7 116 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 IGKV1D-42A0A075B6H8 117 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 TRAV9-1A0A075B6T8 112 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 TRAV26-2A0A0B4J265 109 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 FAM236DA0A1B0GTK5 79 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 RPP14O95059 124 aaKnown RBP0.72□□□□□ -2.29
PCM1-214ENST00000521338 TTRP02766 147 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 HTR1AP08908 422 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 FAM236CP0DP71 79 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 CRYGAP11844 174 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 FKBP2P26885 142 aaKnown RBP0.72□□□□□ -2.29
PCM1-214ENST00000521338 G6PCP35575 357 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 LSM6P62312 80 aaKnown RBP0.72□□□□□ -2.29
PCM1-214ENST00000521338 RANP62826 216 aaKnown RBP0.72□□□□□ -2.29
PCM1-214ENST00000521338 AESQ08117 197 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 ZNF846Q147U1 533 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 RGS21Q2M5E4 152 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 C10orf55Q5SWW7 151 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 MIR17HGQ75NE6 70 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 TERB2Q8NHR7 220 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 DNAJC9Q8WXX5 260 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 TMEM147Q9BVK8 224 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 REG4Q9BYZ8 158 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 ECM29Q5VYK3 1845 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 FLG2Q5D862 2391 aaPredicted RBP0.72□□□□□ -2.29
PCM1-214ENST00000521338 ARFGEF3Q5TH69 2177 aa0.72□□□□□ -2.29
PCM1-214ENST00000521338 ROBO3Q96MS0 1386 aa0.71□□□□□ -2.3
PCM1-214ENST00000521338 A0A087WUJ7 227 aa0.71□□□□□ -2.3
PCM1-214ENST00000521338 TRAV14DV4A0A0A6YYC5 116 aa0.71□□□□□ -2.3
PCM1-214ENST00000521338 GOLGA6L19H0YKK7 550 aa0.71□□□□□ -2.3
PCM1-214ENST00000521338 BUB1B-PAK6H3BSN5 160 aa0.71□□□□□ -2.3
PCM1-214ENST00000521338 PIRO00625 290 aa0.71□□□□□ -2.3
PCM1-214ENST00000521338 OR5F1O95221 314 aa0.71□□□□□ -2.3
PCM1-214ENST00000521338 CNIH1O95406 144 aa0.71□□□□□ -2.3
PCM1-214ENST00000521338 IFNA10P01566 189 aa0.71□□□□□ -2.3
PCM1-214ENST00000521338 TCRBP04435 133 aa0.71□□□□□ -2.3
PCM1-214ENST00000521338 CTSDP07339 412 aaPredicted RBP0.71□□□□□ -2.3
PCM1-214ENST00000521338 SPI1P17947 270 aa0.71□□□□□ -2.3
PCM1-214ENST00000521338 CDKN2CP42773 168 aa0.71□□□□□ -2.3
PCM1-214ENST00000521338 KRTAP10-4P60372 401 aaPredicted RBP0.71□□□□□ -2.3
PCM1-214ENST00000521338 CDC42P60953 191 aa0.71□□□□□ -2.3
PCM1-214ENST00000521338 Q6ZQT0 140 aa0.71□□□□□ -2.3
PCM1-214ENST00000521338 ZNF826PQ6ZT77 177 aa0.71□□□□□ -2.3
PCM1-214ENST00000521338 MNS1Q8NEH6 495 aa0.71□□□□□ -2.3
PCM1-214ENST00000521338 SERPINI1Q99574 410 aa0.71□□□□□ -2.3
PCM1-214ENST00000521338 CMSS1Q9BQ75 279 aaKnown RBP0.71□□□□□ -2.3
PCM1-214ENST00000521338 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.71□□□□□ -2.3
PCM1-214ENST00000521338 SLC39A9Q9NUM3 307 aa0.71□□□□□ -2.3
PCM1-214ENST00000521338 ERGIC3Q9Y282 383 aa0.71□□□□□ -2.3
PCM1-214ENST00000521338 PLXND1Q9Y4D7 1925 aa0.71□□□□□ -2.3
PCM1-214ENST00000521338 ZNF106Q9H2Y7 1883 aaKnown RBP0.71□□□□□ -2.3
PCM1-214ENST00000521338 COL4A5P29400 1685 aa0.7□□□□□ -2.3
PCM1-214ENST00000521338 NEO1Q92859 1461 aa0.7□□□□□ -2.3
PCM1-214ENST00000521338 FUOMA2VDF0 154 aa0.7□□□□□ -2.3
PCM1-214ENST00000521338 SMIM9A6NGZ8 99 aa0.7□□□□□ -2.3
PCM1-214ENST00000521338 HCRTO43612 131 aa0.7□□□□□ -2.3
PCM1-214ENST00000521338 OR2J2O76002 312 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms