RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 LCN12Q6JVE5 192 aa15.64■□□□□ 0.09
TRIM35-203ENST00000521253 UBAC2Q8NBM4 344 aa15.64■□□□□ 0.09
TRIM35-203ENST00000521253 CACNG8Q8WXS5 425 aa15.64■□□□□ 0.09
TRIM35-203ENST00000521253 SLC25A21Q9BQT8 299 aaPredicted RBP15.64■□□□□ 0.09
TRIM35-203ENST00000521253 MT-CO2P00403 227 aa15.63■□□□□ 0.09
TRIM35-203ENST00000521253 ANXA3P12429 323 aa15.63■□□□□ 0.09
TRIM35-203ENST00000521253 INPP1P49441 399 aa15.63■□□□□ 0.09
TRIM35-203ENST00000521253 SPCS3P61009 180 aa15.63■□□□□ 0.09
TRIM35-203ENST00000521253 CD300EQ496F6 205 aaPredicted RBP15.63■□□□□ 0.09
TRIM35-203ENST00000521253 Q56UQ5 140 aa15.63■□□□□ 0.09
TRIM35-203ENST00000521253 SPSB3Q6PJ21 355 aa15.63■□□□□ 0.09
TRIM35-203ENST00000521253 OR2K2Q8NGT1 345 aa15.63■□□□□ 0.09
TRIM35-203ENST00000521253 OR52E5Q8NH55 327 aa15.63■□□□□ 0.09
TRIM35-203ENST00000521253 DYNLRB2Q8TF09 96 aa15.63■□□□□ 0.09
TRIM35-203ENST00000521253 PINX1Q96BK5 328 aaKnown RBP15.63■□□□□ 0.09
TRIM35-203ENST00000521253 CHRDL1Q9BU40 450 aa15.63■□□□□ 0.09
TRIM35-203ENST00000521253 ZNF436Q9C0F3 470 aaPredicted RBP15.63■□□□□ 0.09
TRIM35-203ENST00000521253 ENY2Q9NPA8 101 aa15.63■□□□□ 0.09
TRIM35-203ENST00000521253 A0A0B4J2A0 478 aa15.62■□□□□ 0.09
TRIM35-203ENST00000521253 IGHV3-48P01763 117 aa15.62■□□□□ 0.09
TRIM35-203ENST00000521253 RNASE2P10153 161 aaKnown RBP15.62■□□□□ 0.09
TRIM35-203ENST00000521253 CBLN1P23435 193 aa15.62■□□□□ 0.09
TRIM35-203ENST00000521253 ADMP35318 185 aa15.62■□□□□ 0.09
TRIM35-203ENST00000521253 DEFB114Q30KQ6 69 aa15.62■□□□□ 0.09
TRIM35-203ENST00000521253 TM4SF20Q53R12 229 aa15.62■□□□□ 0.09
TRIM35-203ENST00000521253 TMEM128Q5BJH2 165 aa15.62■□□□□ 0.09
TRIM35-203ENST00000521253 LYZL2Q7Z4W2 148 aa15.62■□□□□ 0.09
TRIM35-203ENST00000521253 Q8N1Y9 231 aa15.62■□□□□ 0.09
TRIM35-203ENST00000521253 SHPKQ9UHJ6 478 aa15.62■□□□□ 0.09
TRIM35-203ENST00000521253 CCR6P51684 374 aa15.61■□□□□ 0.09
TRIM35-203ENST00000521253 SRPXP78539 464 aa15.61■□□□□ 0.09
TRIM35-203ENST00000521253 NMSQ5H8A3 153 aa15.61■□□□□ 0.09
TRIM35-203ENST00000521253 PVRIGQ6DKI7 326 aa15.61■□□□□ 0.09
TRIM35-203ENST00000521253 LGI3Q8N145 548 aa15.61■□□□□ 0.09
TRIM35-203ENST00000521253 TMEM190Q8WZ59 177 aa15.61■□□□□ 0.09
TRIM35-203ENST00000521253 PALMDQ9NP74 551 aa15.61■□□□□ 0.09
TRIM35-203ENST00000521253 TECRQ9NZ01 308 aaKnown RBP15.61■□□□□ 0.09
TRIM35-203ENST00000521253 LINC00854A0A1B0GVQ3 168 aa15.6■□□□□ 0.09
TRIM35-203ENST00000521253 NAP1L6A6NFF2 107 aa15.6■□□□□ 0.09
TRIM35-203ENST00000521253 CTSGP08311 255 aa15.6■□□□□ 0.09
TRIM35-203ENST00000521253 SULT1A3P0DMM9 295 aa15.6■□□□□ 0.09
TRIM35-203ENST00000521253 SULT1A4P0DMN0 295 aa15.6■□□□□ 0.09
TRIM35-203ENST00000521253 FCGR2BP31994 310 aaPredicted RBP15.6■□□□□ 0.09
TRIM35-203ENST00000521253 SUB1P53999 127 aaKnown RBP eCLIP15.6■□□□□ 0.09
TRIM35-203ENST00000521253 MFAP4P55083 255 aa15.6■□□□□ 0.09
TRIM35-203ENST00000521253 RBMS2Q15434 407 aaKnown RBP15.6■□□□□ 0.09
TRIM35-203ENST00000521253 C11orf87Q6NUJ2 197 aa15.6■□□□□ 0.09
TRIM35-203ENST00000521253 UXS1Q8NBZ7 420 aa15.6■□□□□ 0.09
TRIM35-203ENST00000521253 GAR1Q9NY12 217 aaKnown RBP15.6■□□□□ 0.09
TRIM35-203ENST00000521253 UFC1Q9Y3C8 167 aa15.6■□□□□ 0.09
TRIM35-203ENST00000521253 SELENOKQ9Y6D0 94 aa15.6■□□□□ 0.09
TRIM35-203ENST00000521253 NDUFA4O00483 81 aa15.59■□□□□ 0.09
TRIM35-203ENST00000521253 NXPH3O95157 252 aa15.59■□□□□ 0.09
TRIM35-203ENST00000521253 IL7P13232 177 aa15.59■□□□□ 0.09
TRIM35-203ENST00000521253 VAMP1P23763 118 aa15.59■□□□□ 0.09
TRIM35-203ENST00000521253 ELLP55199 621 aaPredicted RBP15.59■□□□□ 0.09
TRIM35-203ENST00000521253 BSXQ3C1V8 233 aa15.59■□□□□ 0.09
TRIM35-203ENST00000521253 TXN2Q99757 166 aa15.59■□□□□ 0.09
TRIM35-203ENST00000521253 ASCL2Q99929 193 aa15.59■□□□□ 0.09
TRIM35-203ENST00000521253 MLXQ9UH92 298 aa15.59■□□□□ 0.09
TRIM35-203ENST00000521253 ZNF785A8K8V0 405 aa15.58■□□□□ 0.08
TRIM35-203ENST00000521253 NUPL2O15504 423 aaKnown RBP15.58■□□□□ 0.08
TRIM35-203ENST00000521253 FRMD6-AS1P0C7T7 363 aa15.58■□□□□ 0.08
TRIM35-203ENST00000521253 C8orf88P0DMB2 117 aa15.58■□□□□ 0.08
TRIM35-203ENST00000521253 PPP1R1AQ13522 171 aa15.58■□□□□ 0.08
TRIM35-203ENST00000521253 ANKRD55Q3KP44 614 aa15.58■□□□□ 0.08
TRIM35-203ENST00000521253 CENPSQ8N2Z9 138 aa15.58■□□□□ 0.08
TRIM35-203ENST00000521253 MARC2Q969Z3 335 aa15.58■□□□□ 0.08
TRIM35-203ENST00000521253 ZNF414Q96IQ9 312 aa15.58■□□□□ 0.08
TRIM35-203ENST00000521253 HEYLQ9NQ87 328 aaPredicted RBP15.58■□□□□ 0.08
TRIM35-203ENST00000521253 CEBPZOSA8MTT3 80 aa15.57■□□□□ 0.08
TRIM35-203ENST00000521253 CORTO00230 105 aa15.57■□□□□ 0.08
TRIM35-203ENST00000521253 NDUFB6O95139 128 aa15.57■□□□□ 0.08
TRIM35-203ENST00000521253 SFT2D2O95562 160 aa15.57■□□□□ 0.08
TRIM35-203ENST00000521253 IGHV4-30-4P0DP06 118 aa15.57■□□□□ 0.08
TRIM35-203ENST00000521253 SMCO1Q147U7 214 aa15.57■□□□□ 0.08
TRIM35-203ENST00000521253 BTNL8Q6UX41 500 aa15.57■□□□□ 0.08
TRIM35-203ENST00000521253 GTSCR1Q86UQ5 136 aa15.57■□□□□ 0.08
TRIM35-203ENST00000521253 DAZ1Q9NQZ3 744 aaKnown RBP15.57■□□□□ 0.08
TRIM35-203ENST00000521253 MRPL27Q9P0M9 148 aaKnown RBP15.57■□□□□ 0.08
TRIM35-203ENST00000521253 CACFD1Q9UGQ2 172 aa15.57■□□□□ 0.08
TRIM35-203ENST00000521253 IGHV3OR16-8A0A075B7F1 116 aa15.56■□□□□ 0.08
TRIM35-203ENST00000521253 GNG7O60262 68 aa15.56■□□□□ 0.08
TRIM35-203ENST00000521253 NHLRC4P0CG21 123 aaPredicted RBP15.56■□□□□ 0.08
TRIM35-203ENST00000521253 BTCP35070 178 aa15.56■□□□□ 0.08
TRIM35-203ENST00000521253 HTR2BP41595 481 aa15.56■□□□□ 0.08
TRIM35-203ENST00000521253 RELQ04864 619 aaPredicted RBP15.56■□□□□ 0.08
TRIM35-203ENST00000521253 GUCA2BQ16661 112 aa15.56■□□□□ 0.08
TRIM35-203ENST00000521253 TMEM61Q8N0U2 210 aa15.56■□□□□ 0.08
TRIM35-203ENST00000521253 LRTM2Q8N967 370 aa15.56■□□□□ 0.08
TRIM35-203ENST00000521253 DUSP18Q8NEJ0 188 aa15.56■□□□□ 0.08
TRIM35-203ENST00000521253 WDR89Q96FK6 387 aaPredicted RBP15.56■□□□□ 0.08
TRIM35-203ENST00000521253 C20orf24Q9BUV8 137 aa15.56■□□□□ 0.08
TRIM35-203ENST00000521253 FNDC4Q9H6D8 234 aaPredicted RBP15.56■□□□□ 0.08
TRIM35-203ENST00000521253 PIGBOS1A0A0B4J2F0 54 aa15.55■□□□□ 0.08
TRIM35-203ENST00000521253 DUXBA0A1W2PPF3 345 aa15.55■□□□□ 0.08
TRIM35-203ENST00000521253 A6NHS1 94 aa15.55■□□□□ 0.08
TRIM35-203ENST00000521253 CENPXA8MT69 81 aa15.55■□□□□ 0.08
TRIM35-203ENST00000521253 NPBWR1P48145 328 aa15.55■□□□□ 0.08
TRIM35-203ENST00000521253 TNFRSF9Q07011 255 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms