RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 B3GALNT1O75752 331 aa3□□□□□ -1.93
CLK4-207ENST00000520909 CDK2AP2O75956 126 aa3□□□□□ -1.93
CLK4-207ENST00000520909 ARG1P05089 322 aa3□□□□□ -1.93
CLK4-207ENST00000520909 GIPP09681 153 aaPredicted RBP3□□□□□ -1.93
CLK4-207ENST00000520909 SAA2P0DJI9 122 aaPredicted RBP3□□□□□ -1.93
CLK4-207ENST00000520909 RPA2P15927 270 aa3□□□□□ -1.93
CLK4-207ENST00000520909 UCP1P25874 307 aa3□□□□□ -1.93
CLK4-207ENST00000520909 DUTP33316 252 aaKnown RBP3□□□□□ -1.93
CLK4-207ENST00000520909 KIR2DS2P43631 304 aa3□□□□□ -1.93
CLK4-207ENST00000520909 H2BFSP57053 126 aa3□□□□□ -1.93
CLK4-207ENST00000520909 LYZP61626 148 aa3□□□□□ -1.93
CLK4-207ENST00000520909 PAX2Q02962 417 aa3□□□□□ -1.93
CLK4-207ENST00000520909 ZNF816Q0VGE8 651 aaPredicted RBP3□□□□□ -1.93
CLK4-207ENST00000520909 CATR1Q13166 79 aa3□□□□□ -1.93
CLK4-207ENST00000520909 KLRD1Q13241 179 aa3□□□□□ -1.93
CLK4-207ENST00000520909 EIF4EBP1Q13541 118 aaPredicted RBP3□□□□□ -1.93
CLK4-207ENST00000520909 NCR3LG1Q68D85 454 aa3□□□□□ -1.93
CLK4-207ENST00000520909 C16orf54Q6UWD8 224 aa3□□□□□ -1.93
CLK4-207ENST00000520909 VMO1Q7Z5L0 202 aa3□□□□□ -1.93
CLK4-207ENST00000520909 SELENOHQ8IZQ5 122 aaKnown RBP3□□□□□ -1.93
CLK4-207ENST00000520909 TCTE3Q8IZS6 198 aa3□□□□□ -1.93
CLK4-207ENST00000520909 LRRC75A-AS1Q8N1F1 130 aa3□□□□□ -1.93
CLK4-207ENST00000520909 SLC35G3Q8N808 338 aa3□□□□□ -1.93
CLK4-207ENST00000520909 C8orf31Q8N9H6 132 aa3□□□□□ -1.93
CLK4-207ENST00000520909 ZNF436-AS1Q8NC38 126 aaPredicted RBP3□□□□□ -1.93
CLK4-207ENST00000520909 OR5M8Q8NGP6 311 aa3□□□□□ -1.93
CLK4-207ENST00000520909 RNASE11Q8TAA1 199 aaKnown RBP3□□□□□ -1.93
CLK4-207ENST00000520909 LHFPL5Q8TAF8 219 aa3□□□□□ -1.93
CLK4-207ENST00000520909 C11orf45Q8TAV5 145 aa3□□□□□ -1.93
CLK4-207ENST00000520909 ZNF596Q8TC21 504 aa3□□□□□ -1.93
CLK4-207ENST00000520909 CD300LFQ8TDQ1 290 aa3□□□□□ -1.93
CLK4-207ENST00000520909 PPP1R14BQ96C90 147 aa3□□□□□ -1.93
CLK4-207ENST00000520909 ADTRPQ96IZ2 230 aa3□□□□□ -1.93
CLK4-207ENST00000520909 TMEM56Q96MV1 263 aa3□□□□□ -1.93
CLK4-207ENST00000520909 MRPL20Q9BYC9 149 aaKnown RBP3□□□□□ -1.93
CLK4-207ENST00000520909 REG4Q9BYZ8 158 aa3□□□□□ -1.93
CLK4-207ENST00000520909 RAB18Q9NP72 206 aa3□□□□□ -1.93
CLK4-207ENST00000520909 PIPOXQ9P0Z9 390 aa3□□□□□ -1.93
CLK4-207ENST00000520909 AMMECR1Q9Y4X0 333 aaPredicted RBP3□□□□□ -1.93
CLK4-207ENST00000520909 KPTNQ9Y664 436 aa3□□□□□ -1.93
CLK4-207ENST00000520909 TMEM56-RWDD3S4R434 201 aa3□□□□□ -1.93
CLK4-207ENST00000520909 DSCAML1Q8TD84 2053 aa3□□□□□ -1.93
CLK4-207ENST00000520909 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3□□□□□ -1.933e-7■■■■□ 25.6
CLK4-207ENST00000520909 CSPG4Q6UVK1 2322 aa3□□□□□ -1.93
CLK4-207ENST00000520909 IGHV3-72A0A0B4J1Y9 119 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 PIGBOS1A0A0B4J2F0 54 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 B4DSR2 109 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 RNASEK-C17orf49H0YIS7 233 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 BUB1B-PAK6H3BSN5 160 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 H7C2Y5 167 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 ATG12O94817 140 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 OR2A4O95047 310 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 S1PR2O95136 353 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 CDS2O95674 445 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 CRYZL1O95825 349 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 KRASP01116 189 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 TGFAP01135 160 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 IGKV1-39P01597 117 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 IGKV1-5P01602 117 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 IGLV1-47P01700 117 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 APOA2P02652 100 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 GAPDHP04406 335 aaKnown RBP2.99□□□□□ -1.93
CLK4-207ENST00000520909 IGKV1D-39P04432 117 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 MSMBP08118 114 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 CT45A6P0DMU7 189 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 CT45A5P0DMU8 189 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 CT45A7P0DMV0 189 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 HLA-GP17693 338 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 VDAC1P21796 283 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 HTR1DP28221 377 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 G6PCP35575 357 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 EIF2B2P49770 351 aaKnown RBP2.99□□□□□ -1.93
CLK4-207ENST00000520909 AKR1C2P52895 323 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 NKX2-5P52952 324 aaPredicted RBP2.99□□□□□ -1.93
CLK4-207ENST00000520909 ERVK-16P61578 105 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 LOXL1Q08397 574 aaPredicted RBP2.99□□□□□ -1.93
CLK4-207ENST00000520909 DIAPH2-AS1Q14236 149 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 RTL8BQ17RB0 113 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 IAH1Q2TAA2 248 aaPredicted RBP2.99□□□□□ -1.93
CLK4-207ENST00000520909 HLA-DRB5Q30154 266 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 LRRC37A5PQ49AS3 106 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 Q5BKY6 102 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 TPTE2P1Q5T6R2 138 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 THOC7Q6I9Y2 204 aaKnown RBP2.99□□□□□ -1.93
CLK4-207ENST00000520909 HCP5Q6MZN7 132 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 ZNF833PQ6ZTB9 187 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 MOB3BQ86TA1 216 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 TGIF2LXQ8IUE1 241 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 TCTEX1D1Q8N7M0 179 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 LRTM2Q8N967 370 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 OR11H6Q8NGC7 330 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 OR2T35Q8NGX2 323 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 OR4S2Q8NH73 311 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 GATAD1Q8WUU5 269 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 TNFRSF14Q92956 283 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 RBPMSQ93062 196 aaKnown RBP2.99□□□□□ -1.93
CLK4-207ENST00000520909 LHX4Q969G2 390 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 IL22RA2Q969J5 263 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 ST6GALNAC6Q969X2 333 aa2.99□□□□□ -1.93
CLK4-207ENST00000520909 RPEQ96AT9 228 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms