RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 TSPAN5P62079 268 aa6.42□□□□□ -1.38
TRIM35-202ENST00000519219 WT1-ASQ06250 92 aa6.42□□□□□ -1.38
TRIM35-202ENST00000519219 SCGB2B2Q4G0G5 96 aa6.42□□□□□ -1.38
TRIM35-202ENST00000519219 LGALS9CQ6DKI2 356 aa6.42□□□□□ -1.38
TRIM35-202ENST00000519219 FAAP20Q6NZ36 180 aa6.42□□□□□ -1.38
TRIM35-202ENST00000519219 ZNF66Q6ZN08 573 aa6.42□□□□□ -1.38
TRIM35-202ENST00000519219 Q6ZNX1 250 aa6.42□□□□□ -1.38
TRIM35-202ENST00000519219 TMEM17Q86X19 198 aa6.42□□□□□ -1.38
TRIM35-202ENST00000519219 SLC38A6Q8IZM9 456 aa6.42□□□□□ -1.38
TRIM35-202ENST00000519219 STPG3Q8N7X2 389 aa6.42□□□□□ -1.38
TRIM35-202ENST00000519219 OR4C16Q8NGL9 310 aa6.42□□□□□ -1.38
TRIM35-202ENST00000519219 CXorf58Q96LI9 332 aa6.42□□□□□ -1.38
TRIM35-202ENST00000519219 C20orf24Q9BUV8 137 aa6.42□□□□□ -1.38
TRIM35-202ENST00000519219 FBXL17Q9UF56 701 aa6.42□□□□□ -1.38
TRIM35-202ENST00000519219 SCP2D1Q9UJQ7 156 aa6.42□□□□□ -1.38
TRIM35-202ENST00000519219 UFC1Q9Y3C8 167 aa6.42□□□□□ -1.38
TRIM35-202ENST00000519219 MUC4Q99102 2169 aa6.42□□□□□ -1.38
TRIM35-202ENST00000519219 TRAV6A0A075B6T7 132 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 KIR2DL5BA0A0G2JN68 375 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 KIR2DL5BA0A0G2JPC4 375 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 UBE2CO00762 179 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 PFDN1O60925 122 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 SLC22A5O76082 557 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 DHFRP00374 187 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 PMP2P02689 132 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 OR13C7P0DN81 318 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 ATF4P18848 351 aaPredicted RBP6.41□□□□□ -1.38
TRIM35-202ENST00000519219 FCGR2CP31995 323 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 HRH1P35367 487 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 TFPI2P48307 235 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 CCR6P51684 374 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 ELLP55199 621 aaPredicted RBP6.41□□□□□ -1.38
TRIM35-202ENST00000519219 ZNF818PQ6ZRF7 136 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 HOGA1Q86XE5 327 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 KIR2DL5AQ8N109 375 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 BEST4Q8NFU0 473 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 OR51H1Q8NH63 302 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 OR4A5Q8NH83 315 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 KIR2DL5BQ8NHK3 375 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 CD300LFQ8TDQ1 290 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 RNF2Q99496 336 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 PRRT1Q99946 306 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 C20orf85Q9H1P6 137 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 DAZ1Q9NQZ3 744 aaKnown RBP6.41□□□□□ -1.38
TRIM35-202ENST00000519219 TMEM140Q9NV12 185 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 NUDT15Q9NV35 164 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 NSG2Q9Y328 171 aa6.41□□□□□ -1.38
TRIM35-202ENST00000519219 IGKV3-7A0A075B6H7 116 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 IGHV3OR16-13A0A075B7E8 117 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 IGHV3-74A0A0B4J1X5 117 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 TEX50A0A1B0GTY4 177 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 DBX1A6NMT0 343 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 INMT-MINDY4F8WBC2 141 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 K7EIM0 57 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 PPYP01298 95 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 TCRBP04435 133 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 RLN1P04808 185 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 H2AFB2P0C5Z0 115 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 FXYD4P59646 89 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 RBMS2Q15434 407 aaKnown RBP6.4□□□□□ -1.38
TRIM35-202ENST00000519219 POU2AF1Q16633 256 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 SLC25A24Q6NUK1 477 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 UBAC2Q8NBM4 344 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 DUSP18Q8NEJ0 188 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 OR51S1Q8NGJ8 323 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 VN1R17PQ8TDU5 208 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 SCARB1Q8WTV0 552 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 GALNT14Q96FL9 552 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 QTRT1Q9BXR0 403 aaKnown RBP6.4□□□□□ -1.38
TRIM35-202ENST00000519219 SLC5A7Q9GZV3 580 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 EHFQ9NZC4 300 aa6.4□□□□□ -1.38
TRIM35-202ENST00000519219 ABCA13Q86UQ4 5058 aa6.4□□□□□ -1.39
TRIM35-202ENST00000519219 PKHD1P08F94 4074 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 OR4C46A6NHA9 309 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 NDUFA4O00483 81 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 CHEK1O14757 476 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 RBFOX2O43251 390 aaKnown RBP eCLIP6.39□□□□□ -1.39
TRIM35-202ENST00000519219 IGHV3-48P01763 117 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 CD74P04233 296 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 SERPINE2P07093 398 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 NQO2P16083 231 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 BTCP35070 178 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 BCAP31P51572 246 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 TAS2R31P59538 309 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 GBGT1Q8N5D6 347 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 ARRDC1Q8N5I2 433 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 FAM24BQ8N5W8 94 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 DMBX1Q8NFW5 382 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 OR5AP2Q8NGF4 316 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 OR4D10Q8NGI6 311 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 BSCL2Q96G97 398 aaPredicted RBP6.39□□□□□ -1.39
TRIM35-202ENST00000519219 RARRES2Q99969 163 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 HINT2Q9BX68 163 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 COMMD5Q9GZQ3 224 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 C21orf62Q9NYP8 219 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 SMPXQ9UHP9 88 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 ANAPC10Q9UM13 185 aa6.39□□□□□ -1.39
TRIM35-202ENST00000519219 F11RQ9Y624 299 aaKnown RBP6.39□□□□□ -1.39
TRIM35-202ENST00000519219 PRAF2O60831 178 aa6.38□□□□□ -1.39
TRIM35-202ENST00000519219 NDUFB6O95139 128 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms