RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 IGKV1D-13A0A0B4J2D9 117 aa8.32□□□□□ -1.08
TRAPPC9-203ENST00000517667 IGHV4-28A0A0C4DH34 117 aa8.32□□□□□ -1.08
TRAPPC9-203ENST00000517667 CHEK1O14757 476 aa8.32□□□□□ -1.08
TRAPPC9-203ENST00000517667 RBFOX2O43251 390 aaKnown RBP eCLIP8.32□□□□□ -1.081e-12■■■■■ 30.2
TRAPPC9-203ENST00000517667 DFFBO76075 338 aa8.32□□□□□ -1.08
TRAPPC9-203ENST00000517667 PTTG1O95997 202 aa8.32□□□□□ -1.08
TRAPPC9-203ENST00000517667 SERPINE2P07093 398 aa8.32□□□□□ -1.08
TRAPPC9-203ENST00000517667 IGKV1-13P0DP09 117 aa8.32□□□□□ -1.08
TRAPPC9-203ENST00000517667 ELK1P19419 428 aa8.32□□□□□ -1.08
TRAPPC9-203ENST00000517667 MSMO1Q15800 293 aa8.32□□□□□ -1.08
TRAPPC9-203ENST00000517667 SOHLH1Q5JUK2 328 aa8.32□□□□□ -1.08
TRAPPC9-203ENST00000517667 SLC25A24Q6NUK1 477 aa8.32□□□□□ -1.08
TRAPPC9-203ENST00000517667 MZT2BQ6NZ67 158 aa8.32□□□□□ -1.08
TRAPPC9-203ENST00000517667 UBAC2Q8NBM4 344 aa8.32□□□□□ -1.08
TRAPPC9-203ENST00000517667 DEDD2Q8WXF8 326 aa8.32□□□□□ -1.08
TRAPPC9-203ENST00000517667 SRRQ9GZT4 340 aa8.32□□□□□ -1.08
TRAPPC9-203ENST00000517667 MIXL1Q9H2W2 232 aa8.32□□□□□ -1.08
TRAPPC9-203ENST00000517667 V9GYH0 126 aa8.32□□□□□ -1.08
TRAPPC9-203ENST00000517667 DYNC1H1Q14204 4646 aaKnown RBP8.31□□□□□ -1.08
TRAPPC9-203ENST00000517667 IGKV3-7A0A075B6H7 116 aa8.31□□□□□ -1.08
TRAPPC9-203ENST00000517667 UPK2O00526 184 aa8.31□□□□□ -1.08
TRAPPC9-203ENST00000517667 CTDSPLO15194 276 aa8.31□□□□□ -1.08
TRAPPC9-203ENST00000517667 HPRT1P00492 218 aa8.31□□□□□ -1.08
TRAPPC9-203ENST00000517667 EIF4EP06730 217 aaKnown RBP8.31□□□□□ -1.08
TRAPPC9-203ENST00000517667 OR13C7P0DN81 318 aa8.31□□□□□ -1.08
TRAPPC9-203ENST00000517667 NQO2P16083 231 aa8.31□□□□□ -1.08
TRAPPC9-203ENST00000517667 FAUP35544 74 aaKnown RBP8.31□□□□□ -1.08
TRAPPC9-203ENST00000517667 POU2AF1Q16633 256 aa8.31□□□□□ -1.08
TRAPPC9-203ENST00000517667 Q56UQ5 140 aa8.31□□□□□ -1.08
TRAPPC9-203ENST00000517667 STHQ8IWL8 128 aa8.31□□□□□ -1.08
TRAPPC9-203ENST00000517667 SPAG16Q8N0X2 631 aa8.31□□□□□ -1.08
TRAPPC9-203ENST00000517667 OR10W1Q8NGF6 305 aa8.31□□□□□ -1.08
TRAPPC9-203ENST00000517667 SCARB1Q8WTV0 552 aa8.31□□□□□ -1.08
TRAPPC9-203ENST00000517667 OR10C1Q96KK4 312 aa8.31□□□□□ -1.08
TRAPPC9-203ENST00000517667 C7orf50Q9BRJ6 194 aaKnown RBP8.31□□□□□ -1.08
TRAPPC9-203ENST00000517667 NDUFAF3Q9BU61 184 aa8.31□□□□□ -1.08
TRAPPC9-203ENST00000517667 F11RQ9Y624 299 aaKnown RBP8.31□□□□□ -1.08
TRAPPC9-203ENST00000517667 DEFB131BA0A096LNP1 70 aa8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 TRAV14DV4A0A0A6YYC5 116 aa8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 ZNF705EA8MWA4 302 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 F8W735 103 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 M0R2N4 97 aa8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 SULT1C2O00338 296 aa8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 NUPL2O15504 423 aaKnown RBP8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 TRAPPC2P0DI81 140 aa8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 TRAPPC2BP0DI82 140 aa8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 RBMY1A1P0DJD3 496 aaKnown RBP8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 RBMY1CP0DJD4 496 aa8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 SPP1P10451 314 aa8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 IL7P13232 177 aa8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 SSBP1Q04837 148 aaKnown RBP8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 WT1-ASQ06250 92 aa8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 CATR1Q13166 79 aa8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 RBMY1FQ15415 496 aaKnown RBP8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 FAM90A2PQ658T7 463 aa8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 MORN3Q6PF18 240 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 ZNF575Q86XF7 245 aa8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 LYSMD2Q8IV50 215 aa8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 GBGT1Q8N5D6 347 aa8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 ZBTB34Q8NCN2 500 aa8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 FCAMRQ8WWV6 532 aa8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 LSM10Q969L4 123 aaKnown RBP8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 ATG5Q9H1Y0 275 aa8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 TMEM140Q9NV12 185 aa8.3□□□□□ -1.08
TRAPPC9-203ENST00000517667 TRAV2A0A0B4J234 112 aa8.29□□□□□ -1.08
TRAPPC9-203ENST00000517667 TRAV3A0A0B4J244 114 aa8.29□□□□□ -1.08
TRAPPC9-203ENST00000517667 GABARAPH6UMI1 98 aa8.29□□□□□ -1.08
TRAPPC9-203ENST00000517667 DNASE2O00115 360 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC9-203ENST00000517667 TNFSF12O43508 249 aa8.29□□□□□ -1.08
TRAPPC9-203ENST00000517667 GSTZ1O43708 216 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC9-203ENST00000517667 YIF1AO95070 293 aa8.29□□□□□ -1.08
TRAPPC9-203ENST00000517667 CTSGP08311 255 aa8.29□□□□□ -1.08
TRAPPC9-203ENST00000517667 TCF24Q7RTU0 167 aa8.29□□□□□ -1.08
TRAPPC9-203ENST00000517667 TOMM5Q8N4H5 51 aa8.29□□□□□ -1.08
TRAPPC9-203ENST00000517667 DMBX1Q8NFW5 382 aa8.29□□□□□ -1.08
TRAPPC9-203ENST00000517667 OR5H6Q8NGV6 325 aa8.29□□□□□ -1.08
TRAPPC9-203ENST00000517667 GPHA2Q96T91 129 aa8.29□□□□□ -1.08
TRAPPC9-203ENST00000517667 SOSTQ9BQB4 213 aa8.29□□□□□ -1.08
TRAPPC9-203ENST00000517667 GINS3Q9BRX5 216 aa8.29□□□□□ -1.08
TRAPPC9-203ENST00000517667 SCPEP1Q9HB40 452 aa8.29□□□□□ -1.08
TRAPPC9-203ENST00000517667 ANXA10Q9UJ72 324 aa8.29□□□□□ -1.08
TRAPPC9-203ENST00000517667 IGHV3-49A0A0A0MS15 119 aa8.28□□□□□ -1.08
TRAPPC9-203ENST00000517667 IGHV3-21A0A0B4J1V1 117 aa8.28□□□□□ -1.08
TRAPPC9-203ENST00000517667 NAP1L6A6NFF2 107 aa8.28□□□□□ -1.08
TRAPPC9-203ENST00000517667 K7EIM0 57 aa8.28□□□□□ -1.08
TRAPPC9-203ENST00000517667 CDK2AP2O75956 126 aa8.28□□□□□ -1.08
TRAPPC9-203ENST00000517667 IFNA10P01566 189 aa8.28□□□□□ -1.08
TRAPPC9-203ENST00000517667 IFNA21P01568 189 aa8.28□□□□□ -1.08
TRAPPC9-203ENST00000517667 IFNA17P01571 189 aa8.28□□□□□ -1.08
TRAPPC9-203ENST00000517667 TAS2R20P59543 309 aa8.28□□□□□ -1.08
TRAPPC9-203ENST00000517667 DEFB131AP59861 70 aa8.28□□□□□ -1.08
TRAPPC9-203ENST00000517667 ARPC4P59998 168 aa8.28□□□□□ -1.08
TRAPPC9-203ENST00000517667 ASAH1Q13510 395 aa8.28□□□□□ -1.08
TRAPPC9-203ENST00000517667 ZNF79Q15937 498 aa8.28□□□□□ -1.08
TRAPPC9-203ENST00000517667 CDNFQ49AH0 187 aa8.28□□□□□ -1.08
TRAPPC9-203ENST00000517667 LEMD1Q68G75 181 aa8.28□□□□□ -1.08
TRAPPC9-203ENST00000517667 OR1L8Q8NGR8 309 aa8.28□□□□□ -1.08
TRAPPC9-203ENST00000517667 ENKURQ8TC29 256 aa8.28□□□□□ -1.08
TRAPPC9-203ENST00000517667 SMIM4Q8WVI0 70 aa8.28□□□□□ -1.08
TRAPPC9-203ENST00000517667 SECTM1Q8WVN6 248 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms