RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 PLXNA2O75051 1894 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 ANAPC1Q9H1A4 1944 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 ZNF816-ZNF321PA0A0X1KG74 233 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 A0A1B0GWA3 101 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 LOC107986453A0A1B0GWG9 222 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 SMIM27A0A1W2PRY6 76 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 DDTLA6NHG4 134 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 C2CD4DB7Z1M9 353 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 UQCRQO14949 82 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 NPFFO15130 113 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 NDUFS4O43181 175 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 SYNGR2O43760 224 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 NKX2-2O95096 273 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 CLDN7O95471 211 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 NAPSAO96009 420 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 CXCL10P02778 98 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 CRYGDP07320 174 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 CA3P07451 260 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 ZNF823P16415 610 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 PPIFP30405 207 aaKnown RBP3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 PGFP49763 221 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 XGP55808 180 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 CTXN1P60606 82 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 HSPE1P61604 102 aaKnown RBP3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 GNB1P62873 340 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 RPL30P62888 115 aaKnown RBP3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 PSG4Q00888 419 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 LGALS9BQ3B8N2 356 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 MRPL2Q5T653 305 aaKnown RBP3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 FKBP1CQ5VVH2 108 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 TEX36Q5VZQ5 186 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 LYSMD4Q5XG99 296 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 LGALS9CQ6DKI2 356 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 MFSD12Q6NUT3 480 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 Q6P435 159 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 AMTNQ6UX39 209 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 C17orf99Q6UX52 265 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 ZNF841Q6ZN19 808 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 C6orf201Q7Z4U5 140 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 RPP25LQ8N5L8 163 aaKnown RBP3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 OR52N5Q8NH56 324 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 C11orf52Q96A22 123 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 ZNF689Q96CS4 500 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 SLC35A4Q96G79 324 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 TMEM101Q96IK0 257 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 ARHGAP5-AS1Q96IT6 56 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 MLST8Q9BVC4 326 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 S1PR5Q9H228 398 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 IL36RNQ9UBH0 155 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 INSIG2Q9Y5U4 225 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 MPC1Q9Y5U8 109 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 SMCHD1A6NHR9 2005 aa3.95□□□□□ -1.78
HMGB1P19-201ENST00000517578 PLXNA1Q9UIW2 1896 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 ADAMTSL1Q8N6G6 1762 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 A0A1W2PPV9 198 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 hDV102S1A0JD36 115 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 LINC01553A4QN01 128 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 A8MWV9 139 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 IGLL5B9A064 214 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 LINC01619G3V211 115 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 CCDC179H3BU77 68 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 ZG16O60844 167 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 PDCD6O75340 191 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 AGFG2O95081 481 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 DUSP14O95147 198 aaKnown RBP3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 NDUFA7O95182 113 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 EML2O95834 649 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 EGR1P18146 543 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 MALP21145 153 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 ZFP36P26651 326 aaKnown RBP3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 HOXD9P28356 352 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 SSR2P43308 183 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 SLC38A11Q08AI6 406 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 ZNF415Q09FC8 603 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 GUSBP1Q15486 140 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 ZNF77Q15935 545 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 LY6G5CQ5SRR4 150 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 TMEM211Q6ICI0 200 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 SLC48A1Q6P1K1 146 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 ZNF474Q6S9Z5 364 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 FAM159AQ6UWV7 190 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 FAM231DQ6ZW35 169 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 SH2D6Q7Z4S9 175 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 C10orf126Q8N4M7 172 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 BCORP1Q8N888 145 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 OR1L4Q8NGR5 311 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 LRRC29Q8WV35 223 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 SOCS4Q8WXH5 440 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 PIGCQ92535 297 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 KLK6Q92876 244 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 ST6GALNAC6Q969X2 333 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 TM4SF19Q96DZ7 209 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 LINC00479Q96M42 142 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 C20orf78Q9BR46 151 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 FBXL15Q9H469 300 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 V9GYV3 84 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 MDC1Q14676 2089 aaKnown RBP3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 ZNF831Q5JPB2 1677 aa3.94□□□□□ -1.78
HMGB1P19-201ENST00000517578 PTPRDP23468 1912 aa3.93□□□□□ -1.78
HMGB1P19-201ENST00000517578 A0A0A6YYD5 115 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms