RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 ETV3LQ6ZN32 361 aa7.64□□□□□ -1.19
CLN8-202ENST00000517514 HAPLN4Q86UW8 402 aa7.64□□□□□ -1.19
CLN8-202ENST00000517514 NECAP1Q8NC96 275 aa7.64□□□□□ -1.19
CLN8-202ENST00000517514 SLC24A4Q8NFF2 622 aa7.64□□□□□ -1.19
CLN8-202ENST00000517514 OR4X2Q8NGF9 303 aa7.64□□□□□ -1.19
CLN8-202ENST00000517514 SPATA3Q8NHX4 192 aa7.64□□□□□ -1.19
CLN8-202ENST00000517514 PPP1R1CQ8WVI7 109 aa7.64□□□□□ -1.19
CLN8-202ENST00000517514 UBE2E2Q96LR5 201 aa7.64□□□□□ -1.19
CLN8-202ENST00000517514 CCDC140Q96MF4 163 aa7.64□□□□□ -1.19
CLN8-202ENST00000517514 ZNF436Q9C0F3 470 aaPredicted RBP7.64□□□□□ -1.19
CLN8-202ENST00000517514 ZFP57Q9NU63 452 aa7.64□□□□□ -1.19
CLN8-202ENST00000517514 CACFD1Q9UGQ2 172 aa7.64□□□□□ -1.19
CLN8-202ENST00000517514 FBXL7Q9UJT9 491 aa7.64□□□□□ -1.19
CLN8-202ENST00000517514 LSM5Q9Y4Y9 91 aaKnown RBP7.64□□□□□ -1.19
CLN8-202ENST00000517514 A0A1W2PRX2 142 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 FAM223BA6NKX1 122 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 H3BP45 60 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 MED6O75586 246 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 DEDDO75618 318 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 MPC2O95563 127 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 MT-CO2P00403 227 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 IGHV3-11P01762 117 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 IGHV3-48P01763 117 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 IGHV3-23P01764 117 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 HIST1H1BP16401 226 aaKnown RBP7.63□□□□□ -1.19
CLN8-202ENST00000517514 NPY1RP25929 384 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 TAS2R30P59541 319 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 RUNX1Q01196 453 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 ARL16Q0P5N6 197 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 C15orf32Q32M92 178 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 ZNF343Q6P1L6 599 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 TMEM65Q6PI78 240 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 TMEM14EPQ6UXP3 125 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 NDUFA11Q86Y39 141 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 FAM223AQ8IWN6 122 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 C3orf56Q8N813 242 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 ZNF502Q8TBZ5 544 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 SCARB1Q8WTV0 552 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 OR5B12Q96R08 314 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 HIPK2Q9H2X6 1198 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 ENY2Q9NPA8 101 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 TSSC4Q9Y5U2 329 aaPredicted RBP7.63□□□□□ -1.19
CLN8-202ENST00000517514 U3KQ87 197 aa7.63□□□□□ -1.19
CLN8-202ENST00000517514 IGSF23A1L1A6 192 aa7.62□□□□□ -1.19
CLN8-202ENST00000517514 FAM24AA6NFZ4 105 aa7.62□□□□□ -1.19
CLN8-202ENST00000517514 IFNA10P01566 189 aa7.62□□□□□ -1.19
CLN8-202ENST00000517514 LGALS1P09382 135 aaKnown RBP7.62□□□□□ -1.19
CLN8-202ENST00000517514 GIPP09681 153 aaPredicted RBP7.62□□□□□ -1.19
CLN8-202ENST00000517514 DEFA4P12838 97 aa7.62□□□□□ -1.19
CLN8-202ENST00000517514 LYL1P12980 280 aa7.62□□□□□ -1.19
CLN8-202ENST00000517514 SNCAP37840 140 aa7.62□□□□□ -1.19
CLN8-202ENST00000517514 S100A10P60903 97 aa7.62□□□□□ -1.19
CLN8-202ENST00000517514 CYCSP99999 105 aaKnown RBP7.62□□□□□ -1.19
CLN8-202ENST00000517514 EXOSC2Q13868 293 aaKnown RBP7.62□□□□□ -1.19
CLN8-202ENST00000517514 DEFB136Q30KP8 78 aa7.62□□□□□ -1.19
CLN8-202ENST00000517514 NSUN5P1Q3KNT7 163 aa7.62□□□□□ -1.19
CLN8-202ENST00000517514 LRRC37A5PQ49AS3 106 aa7.62□□□□□ -1.19
CLN8-202ENST00000517514 SPANXN5Q5MJ07 72 aa7.62□□□□□ -1.19
CLN8-202ENST00000517514 C8orf86Q6ZUL3 223 aa7.62□□□□□ -1.19
CLN8-202ENST00000517514 KLHL30-AS1Q8NEE0 82 aa7.62□□□□□ -1.19
CLN8-202ENST00000517514 MISP3Q96FF7 219 aa7.62□□□□□ -1.19
CLN8-202ENST00000517514 BSCL2Q96G97 398 aaPredicted RBP7.62□□□□□ -1.19
CLN8-202ENST00000517514 RAX2Q96IS3 184 aa7.62□□□□□ -1.19
CLN8-202ENST00000517514 USMG5Q96IX5 58 aa7.62□□□□□ -1.19
CLN8-202ENST00000517514 DUX3Q96PT4 197 aa7.62□□□□□ -1.19
CLN8-202ENST00000517514 CIB3Q96Q77 187 aaPredicted RBP7.62□□□□□ -1.19
CLN8-202ENST00000517514 RAB40CQ96S21 281 aa7.62□□□□□ -1.19
CLN8-202ENST00000517514 PSENENQ9NZ42 101 aa7.62□□□□□ -1.19
CLN8-202ENST00000517514 DNAH3Q8TD57 4116 aa7.62□□□□□ -1.19
CLN8-202ENST00000517514 hCG_2014768A0A024R1R8 64 aa7.61□□□□□ -1.19
CLN8-202ENST00000517514 IGHV4OR15-8A0A075B7B6 117 aa7.61□□□□□ -1.19
CLN8-202ENST00000517514 A0A087WW49 117 aa7.61□□□□□ -1.19
CLN8-202ENST00000517514 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.61□□□□□ -1.19
CLN8-202ENST00000517514 TSC22D2O75157 780 aa7.61□□□□□ -1.19
CLN8-202ENST00000517514 TSPAN15O95858 294 aa7.61□□□□□ -1.19
CLN8-202ENST00000517514 ATP5G2Q06055 141 aa7.61□□□□□ -1.19
CLN8-202ENST00000517514 SHISA2Q6UWI4 295 aa7.61□□□□□ -1.19
CLN8-202ENST00000517514 MRPL41Q8IXM3 137 aaKnown RBP7.61□□□□□ -1.19
CLN8-202ENST00000517514 OR1L6Q8NGR2 347 aa7.61□□□□□ -1.19
CLN8-202ENST00000517514 RNASEH2CQ8TDP1 164 aaKnown RBP7.61□□□□□ -1.19
CLN8-202ENST00000517514 VN1R17PQ8TDU5 208 aa7.61□□□□□ -1.19
CLN8-202ENST00000517514 C4orf3Q8WVX3 66 aa7.61□□□□□ -1.19
CLN8-202ENST00000517514 ST6GAL2Q96JF0 529 aa7.61□□□□□ -1.19
CLN8-202ENST00000517514 MBD2Q9UBB5 411 aa7.61□□□□□ -1.19
CLN8-202ENST00000517514 WNK1Q9H4A3 2382 aa7.6□□□□□ -1.19
CLN8-202ENST00000517514 A0A0G2JLM5 398 aa7.6□□□□□ -1.19
CLN8-202ENST00000517514 ANKRD34BA5PLL1 514 aa7.6□□□□□ -1.19
CLN8-202ENST00000517514 SMLR1H3BR10 107 aa7.6□□□□□ -1.19
CLN8-202ENST00000517514 BMPR1BO00238 502 aa7.6□□□□□ -1.19
CLN8-202ENST00000517514 METTL15P1P0C7V9 234 aa7.6□□□□□ -1.19
CLN8-202ENST00000517514 ADMP35318 185 aa7.6□□□□□ -1.19
CLN8-202ENST00000517514 BCAP31P51572 246 aa7.6□□□□□ -1.19
CLN8-202ENST00000517514 SUB1P53999 127 aaKnown RBP eCLIP7.6□□□□□ -1.19
CLN8-202ENST00000517514 ATP5IP56385 69 aaPredicted RBP7.6□□□□□ -1.19
CLN8-202ENST00000517514 RAP2BP61225 183 aa7.6□□□□□ -1.19
CLN8-202ENST00000517514 CD69Q07108 199 aa7.6□□□□□ -1.19
CLN8-202ENST00000517514 CD300CQ08708 224 aa7.6□□□□□ -1.19
CLN8-202ENST00000517514 FHL3Q13643 280 aa7.6□□□□□ -1.19
CLN8-202ENST00000517514 KHDC1LQ5JSQ8 128 aa7.6□□□□□ -1.19
CLN8-202ENST00000517514 PRSS54Q6PEW0 395 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms