RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 COX11Q9Y6N1 276 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 PSPNO60542 156 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 FOXG1P55316 489 aaPredicted RBP5.53□□□□□ -1.52
CPNE3-203ENST00000517490 MORN2Q502X0 79 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 ZNF114Q8NC26 417 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 OR10AG1Q8NH19 301 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 LTBP2Q14767 1821 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 TRAV30A0A087WSZ9 112 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 TRAV17A0A0B4J275 112 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 HIGD1CA8MV81 97 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 K7ESF4 209 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 RBP4P02753 201 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 REG1AP05451 166 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 VWC2Q2TAL6 325 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 TSKUQ8WUA8 353 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 ST6GALNAC6Q969X2 333 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 CHCHD1Q96BP2 118 aaKnown RBP5.53□□□□□ -1.52
CPNE3-203ENST00000517490 DCTN5Q9BTE1 182 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 RPP21Q9H633 154 aaKnown RBP5.53□□□□□ -1.52
CPNE3-203ENST00000517490 SHANK1Q9Y566 2161 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 LINC00473A8K010 186 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 GFRA3O60609 400 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 GPR6P46095 362 aaPredicted RBP5.53□□□□□ -1.52
CPNE3-203ENST00000517490 FOXA3P55318 350 aaPredicted RBP5.53□□□□□ -1.52
CPNE3-203ENST00000517490 ARF6P62330 175 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 ODF3L1Q8IXM7 274 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 PROK2Q9HC23 129 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 PILRBQ9UKJ0 227 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 HIGD1AQ9Y241 93 aa5.53□□□□□ -1.52
CPNE3-203ENST00000517490 ASXL3Q9C0F0 2248 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 FNDC10F2Z333 226 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 ITGB1BP1O14713 200 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 ACP1P24666 158 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 RND1Q92730 232 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 C11orf52Q96A22 123 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 TNFRSF19Q9NS68 423 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 FOXA2Q9Y261 457 aaPredicted RBP5.52□□□□□ -1.53
CPNE3-203ENST00000517490 PINLYPA6NC86 204 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 FOXH1O75593 365 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 FABP2P12104 132 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 WDR82Q6UXN9 313 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 LEAP2Q969E1 77 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 PEMTQ9UBM1 199 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 SDK2Q58EX2 2172 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 FCER1GP30273 86 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 UQCRFS1P47985 274 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 LDLRAD2Q5SZI1 272 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 VWA1Q6PCB0 445 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 TMEM136Q6ZRR5 245 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 Q6ZT83 130 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 PRNTQ86SH4 94 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 ZADH2Q8N4Q0 377 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 C5orf17Q8NAS9 161 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 RAX2Q96IS3 184 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 GPR82Q96P67 336 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 AP5S1Q9NUS5 200 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 UPK2O00526 184 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 PLAUP00749 431 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 CELA3BP08861 270 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 GATA2P23769 480 aaPredicted RBP5.52□□□□□ -1.53
CPNE3-203ENST00000517490 PRCDQ00LT1 54 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 HIST1H1AQ02539 215 aaPredicted RBP5.52□□□□□ -1.53
CPNE3-203ENST00000517490 TNXAQ16473 311 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 DTX1Q86Y01 620 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 OSR1Q8TAX0 266 aaPredicted RBP5.52□□□□□ -1.53
CPNE3-203ENST00000517490 NPIPB3Q92617 1050 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 MS4A6AQ9H2W1 248 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 V9GYV3 84 aa5.52□□□□□ -1.53
CPNE3-203ENST00000517490 FBLL1A6NHQ2 334 aaKnown RBP5.51□□□□□ -1.53
CPNE3-203ENST00000517490 DKK1O94907 266 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 GPR183P32249 361 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 LCN12Q6JVE5 192 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 RBPMS2Q6ZRY4 209 aaKnown RBP5.51□□□□□ -1.53
CPNE3-203ENST00000517490 FMC1Q96HJ9 113 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 SAA2-SAA4A0A096LPE2 208 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 ZNF207O43670 478 aaKnown RBP5.51□□□□□ -1.53
CPNE3-203ENST00000517490 NUPR1O60356 82 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 PLP1P60201 277 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 LINC00305Q7Z4B0 112 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 COQ2Q96H96 371 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 SSBP4Q9BWG4 385 aaPredicted RBP5.51□□□□□ -1.53
CPNE3-203ENST00000517490 CLEC7AQ9BXN2 247 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 ZNF257Q9Y2Q1 563 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 FAM186AA6NE01 2351 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 KBTBD11-OT1A0A1B0GTJ5 212 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 CA1P00915 261 aaPredicted RBP5.51□□□□□ -1.53
CPNE3-203ENST00000517490 DHRS13Q6UX07 377 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 MOB3BQ86TA1 216 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 NUDT10Q8NFP7 164 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 NUDT11Q96G61 164 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 RASL11BQ9BPW5 248 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 MAP1BP46821 2468 aaKnown RBP5.51□□□□□ -1.53
CPNE3-203ENST00000517490 PATE3B3GLJ2 98 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 ESDP10768 282 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 NPPCP23582 126 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 ERVK11-1P61568 191 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 CD69Q07108 199 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 ZNRF1Q8ND25 227 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 ITLN1Q8WWA0 313 aa5.51□□□□□ -1.53
CPNE3-203ENST00000517490 GUCD1Q96NT3 240 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms