RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 SPSB3Q6PJ21 355 aa10.62□□□□□ -0.71
PDGFRB-202ENST00000517488 GTSCR1Q86UQ5 136 aa10.62□□□□□ -0.71
PDGFRB-202ENST00000517488 SLC35G3Q8N808 338 aa10.62□□□□□ -0.71
PDGFRB-202ENST00000517488 TMEM190Q8WZ59 177 aa10.62□□□□□ -0.71
PDGFRB-202ENST00000517488 RBPMSQ93062 196 aaKnown RBP10.62□□□□□ -0.71
PDGFRB-202ENST00000517488 WDR89Q96FK6 387 aaPredicted RBP10.62□□□□□ -0.71
PDGFRB-202ENST00000517488 ZNF414Q96IQ9 312 aa10.62□□□□□ -0.71
PDGFRB-202ENST00000517488 ATP6V0BQ99437 205 aa10.62□□□□□ -0.71
PDGFRB-202ENST00000517488 PRR13Q9NZ81 148 aa10.62□□□□□ -0.71
PDGFRB-202ENST00000517488 KMT2CQ8NEZ4 4911 aaKnown RBP10.62□□□□□ -0.71
PDGFRB-202ENST00000517488 STAB2Q8WWQ8 2551 aa10.61□□□□□ -0.71
PDGFRB-202ENST00000517488 IGHV3OR16-8A0A075B7F1 116 aa10.61□□□□□ -0.71
PDGFRB-202ENST00000517488 INS-IGF2F8WCM5 200 aa10.61□□□□□ -0.71
PDGFRB-202ENST00000517488 CTSGP08311 255 aa10.61□□□□□ -0.71
PDGFRB-202ENST00000517488 C8orf88P0DMB2 117 aa10.61□□□□□ -0.71
PDGFRB-202ENST00000517488 TMEM187Q14656 261 aa10.61□□□□□ -0.71
PDGFRB-202ENST00000517488 TMEM268Q5VZI3 342 aa10.61□□□□□ -0.71
PDGFRB-202ENST00000517488 ZNF57Q68EA5 555 aaPredicted RBP10.61□□□□□ -0.71
PDGFRB-202ENST00000517488 BTNL8Q6UX41 500 aa10.61□□□□□ -0.71
PDGFRB-202ENST00000517488 TMEM61Q8N0U2 210 aa10.61□□□□□ -0.71
PDGFRB-202ENST00000517488 PINX1Q96BK5 328 aaKnown RBP10.61□□□□□ -0.71
PDGFRB-202ENST00000517488 GPR146Q96CH1 333 aa10.61□□□□□ -0.71
PDGFRB-202ENST00000517488 WWC2-AS2Q96NR7 200 aa10.61□□□□□ -0.71
PDGFRB-202ENST00000517488 SCGB3A2Q96PL1 93 aa10.61□□□□□ -0.71
PDGFRB-202ENST00000517488 PDCD10Q9BUL8 212 aa10.61□□□□□ -0.71
PDGFRB-202ENST00000517488 PALMDQ9NP74 551 aa10.61□□□□□ -0.71
PDGFRB-202ENST00000517488 UFC1Q9Y3C8 167 aa10.61□□□□□ -0.71
PDGFRB-202ENST00000517488 TMEM56-RWDD3S4R434 201 aa10.61□□□□□ -0.71
PDGFRB-202ENST00000517488 TENM3Q9P273 2699 aa10.6□□□□□ -0.71
PDGFRB-202ENST00000517488 CD7P09564 240 aa10.6□□□□□ -0.71
PDGFRB-202ENST00000517488 RNASE2P10153 161 aaKnown RBP10.6□□□□□ -0.71
PDGFRB-202ENST00000517488 AKR1C4P17516 323 aa10.6□□□□□ -0.71
PDGFRB-202ENST00000517488 SNCAP37840 140 aa10.6□□□□□ -0.71
PDGFRB-202ENST00000517488 HOXA1P49639 335 aaPredicted RBP10.6□□□□□ -0.71
PDGFRB-202ENST00000517488 MFAP4P55083 255 aa10.6□□□□□ -0.71
PDGFRB-202ENST00000517488 ELLP55199 621 aaPredicted RBP10.6□□□□□ -0.71
PDGFRB-202ENST00000517488 CD81P60033 236 aa10.6□□□□□ -0.71
PDGFRB-202ENST00000517488 AARDQ4LEZ3 155 aa10.6□□□□□ -0.71
PDGFRB-202ENST00000517488 FAM219AQ8IW50 185 aa10.6□□□□□ -0.71
PDGFRB-202ENST00000517488 TOMM5Q8N4H5 51 aa10.6□□□□□ -0.71
PDGFRB-202ENST00000517488 MARC2Q969Z3 335 aa10.6□□□□□ -0.71
PDGFRB-202ENST00000517488 GALNT14Q96FL9 552 aa10.6□□□□□ -0.71
PDGFRB-202ENST00000517488 NEURL2Q9BR09 285 aa10.6□□□□□ -0.71
PDGFRB-202ENST00000517488 C20orf24Q9BUV8 137 aa10.6□□□□□ -0.71
PDGFRB-202ENST00000517488 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.6□□□□□ -0.71
PDGFRB-202ENST00000517488 MRPL27Q9P0M9 148 aaKnown RBP10.6□□□□□ -0.71
PDGFRB-202ENST00000517488 CACNG5Q9UF02 275 aa10.6□□□□□ -0.71
PDGFRB-202ENST00000517488 NDUFA4O00483 81 aa10.59□□□□□ -0.71
PDGFRB-202ENST00000517488 ZNF207O43670 478 aaKnown RBP10.59□□□□□ -0.71
PDGFRB-202ENST00000517488 FCGR2BP31994 310 aaPredicted RBP10.59□□□□□ -0.71
PDGFRB-202ENST00000517488 FAUP35544 74 aaKnown RBP10.59□□□□□ -0.71
PDGFRB-202ENST00000517488 AP3S2P59780 193 aa10.59□□□□□ -0.71
PDGFRB-202ENST00000517488 SPCS3P61009 180 aa10.59□□□□□ -0.71
PDGFRB-202ENST00000517488 SUPT4H1P63272 117 aaKnown RBP10.59□□□□□ -0.71
PDGFRB-202ENST00000517488 PVRIGQ6DKI7 326 aa10.59□□□□□ -0.71
PDGFRB-202ENST00000517488 RCHY1Q96PM5 261 aa10.59□□□□□ -0.71
PDGFRB-202ENST00000517488 SRRQ9GZT4 340 aa10.59□□□□□ -0.71
PDGFRB-202ENST00000517488 WFDC10AQ9H1F0 79 aa10.59□□□□□ -0.71
PDGFRB-202ENST00000517488 TUBA4BQ9H853 241 aa10.59□□□□□ -0.71
PDGFRB-202ENST00000517488 GAR1Q9NY12 217 aaKnown RBP10.59□□□□□ -0.71
PDGFRB-202ENST00000517488 KCNIP3Q9Y2W7 256 aa10.59□□□□□ -0.71
PDGFRB-202ENST00000517488 NUPL2O15504 423 aaKnown RBP10.58□□□□□ -0.72
PDGFRB-202ENST00000517488 SCAF4O95104 1147 aaKnown RBP10.58□□□□□ -0.72
PDGFRB-202ENST00000517488 SPANXN2Q5MJ10 180 aa10.58□□□□□ -0.72
PDGFRB-202ENST00000517488 DEFB125Q8N687 156 aa10.58□□□□□ -0.72
PDGFRB-202ENST00000517488 OR52E5Q8NH55 327 aa10.58□□□□□ -0.72
PDGFRB-202ENST00000517488 IL22RA2Q969J5 263 aa10.58□□□□□ -0.72
PDGFRB-202ENST00000517488 TXN2Q99757 166 aa10.58□□□□□ -0.72
PDGFRB-202ENST00000517488 TM2D3Q9BRN9 247 aa10.58□□□□□ -0.72
PDGFRB-202ENST00000517488 ENY2Q9NPA8 101 aa10.58□□□□□ -0.72
PDGFRB-202ENST00000517488 DAZ1Q9NQZ3 744 aaKnown RBP10.58□□□□□ -0.72
PDGFRB-202ENST00000517488 NXPH3O95157 252 aa10.57□□□□□ -0.72
PDGFRB-202ENST00000517488 SUB1P53999 127 aaKnown RBP eCLIP10.57□□□□□ -0.72
PDGFRB-202ENST00000517488 RELQ04864 619 aaPredicted RBP10.57□□□□□ -0.72
PDGFRB-202ENST00000517488 MLANAQ16655 118 aa10.57□□□□□ -0.72
PDGFRB-202ENST00000517488 HAGHQ16775 308 aa10.57□□□□□ -0.72
PDGFRB-202ENST00000517488 BSXQ3C1V8 233 aa10.57□□□□□ -0.72
PDGFRB-202ENST00000517488 LYZL2Q7Z4W2 148 aa10.57□□□□□ -0.72
PDGFRB-202ENST00000517488 TMED4Q7Z7H5 227 aa10.57□□□□□ -0.72
PDGFRB-202ENST00000517488 FNDC4Q9H6D8 234 aaPredicted RBP10.57□□□□□ -0.72
PDGFRB-202ENST00000517488 MRPL36Q9P0J6 103 aaKnown RBP10.57□□□□□ -0.72
PDGFRB-202ENST00000517488 TRAV25A0A0B4J276 109 aa10.56□□□□□ -0.72
PDGFRB-202ENST00000517488 OR11H12B2RN74 326 aa10.56□□□□□ -0.72
PDGFRB-202ENST00000517488 K7EMT4 169 aa10.56□□□□□ -0.72
PDGFRB-202ENST00000517488 GNG7O60262 68 aa10.56□□□□□ -0.72
PDGFRB-202ENST00000517488 YIF1AO95070 293 aa10.56□□□□□ -0.72
PDGFRB-202ENST00000517488 BAK1Q16611 211 aa10.56□□□□□ -0.72
PDGFRB-202ENST00000517488 NMSQ5H8A3 153 aa10.56□□□□□ -0.72
PDGFRB-202ENST00000517488 LINC00322Q6ZN03 302 aaPredicted RBP10.56□□□□□ -0.72
PDGFRB-202ENST00000517488 RBPMS2Q6ZRY4 209 aaKnown RBP10.56□□□□□ -0.72
PDGFRB-202ENST00000517488 DUSP18Q8NEJ0 188 aa10.56□□□□□ -0.72
PDGFRB-202ENST00000517488 ZMAT4Q9H898 229 aa10.56□□□□□ -0.72
PDGFRB-202ENST00000517488 A0A0B4J2A0 478 aa10.55□□□□□ -0.72
PDGFRB-202ENST00000517488 RBMY1BA6NDE4 496 aaKnown RBP10.55□□□□□ -0.72
PDGFRB-202ENST00000517488 RBMY1EA6NEQ0 496 aaKnown RBP10.55□□□□□ -0.72
PDGFRB-202ENST00000517488 C15orf62A8K5M9 175 aa10.55□□□□□ -0.72
PDGFRB-202ENST00000517488 CEBPZOSA8MTT3 80 aa10.55□□□□□ -0.72
PDGFRB-202ENST00000517488 CORTO00230 105 aa10.55□□□□□ -0.72
PDGFRB-202ENST00000517488 RBMY1DP0C7P1 496 aaKnown RBP10.55□□□□□ -0.72
PDGFRB-202ENST00000517488 SULT1A3P0DMM9 295 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms