RNA–Protein interactions for RNA: ENST00000517323.2

TRPS1-206, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 5

Gene TRPS1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-206ENST00000517323 HTR2BP41595 481 aa12.18□□□□□ -0.46
TRPS1-206ENST00000517323 ARSJQ5FYB0 599 aaPredicted RBP12.18□□□□□ -0.46
TRPS1-206ENST00000517323 RBMS3Q6XE24 437 aaKnown RBP12.18□□□□□ -0.46
TRPS1-206ENST00000517323 ZNF329Q86UD4 541 aa12.18□□□□□ -0.46
TRPS1-206ENST00000517323 OR5R1Q8NH85 324 aa12.18□□□□□ -0.46
TRPS1-206ENST00000517323 C2CD3Q4AC94 2353 aa12.18□□□□□ -0.46
TRPS1-206ENST00000517323 CTRB1P17538 263 aa12.18□□□□□ -0.46
TRPS1-206ENST00000517323 CTRB2Q6GPI1 263 aa12.18□□□□□ -0.46
TRPS1-206ENST00000517323 SLC25A24Q6NUK1 477 aa12.18□□□□□ -0.46
TRPS1-206ENST00000517323 ALKAL2Q6UX46 152 aa12.18□□□□□ -0.46
TRPS1-206ENST00000517323 OR1S2Q8NGQ3 325 aa12.18□□□□□ -0.46
TRPS1-206ENST00000517323 SGMS2Q8NHU3 365 aa12.18□□□□□ -0.46
TRPS1-206ENST00000517323 CDC42EP3Q9UKI2 254 aa12.18□□□□□ -0.46
TRPS1-206ENST00000517323 FAM74A1Q5RGS3 127 aa12.17□□□□□ -0.46
TRPS1-206ENST00000517323 SLC35E3Q7Z769 313 aa12.17□□□□□ -0.46
TRPS1-206ENST00000517323 OR10P1Q8NGE3 313 aa12.17□□□□□ -0.46
TRPS1-206ENST00000517323 SUN5Q8TC36 379 aa12.17□□□□□ -0.46
TRPS1-206ENST00000517323 GON7Q9BXV9 100 aa12.17□□□□□ -0.46
TRPS1-206ENST00000517323 F11RQ9Y624 299 aaKnown RBP12.17□□□□□ -0.46
TRPS1-206ENST00000517323 OPRK1P41145 380 aa12.16□□□□□ -0.46
TRPS1-206ENST00000517323 C2orf83Q53S99 150 aa12.16□□□□□ -0.46
TRPS1-206ENST00000517323 ZNF355PQ9NSJ1 428 aa12.16□□□□□ -0.46
TRPS1-206ENST00000517323 FOSL1P15407 271 aa12.16□□□□□ -0.46
TRPS1-206ENST00000517323 FANCD2OSQ96PS1 177 aa12.16□□□□□ -0.46
TRPS1-206ENST00000517323 RSG1Q9BU20 258 aa12.16□□□□□ -0.46
TRPS1-206ENST00000517323 ZNF702PQ9H963 129 aa12.16□□□□□ -0.46
TRPS1-206ENST00000517323 TMEM160Q9NX00 188 aa12.16□□□□□ -0.46
TRPS1-206ENST00000517323 IGHG2P01859 326 aa12.15□□□□□ -0.46
TRPS1-206ENST00000517323 BAXQ07812 192 aa12.15□□□□□ -0.46
TRPS1-206ENST00000517323 ST8SIA2Q92186 375 aa12.15□□□□□ -0.46
TRPS1-206ENST00000517323 ACY3Q96HD9 319 aa12.15□□□□□ -0.46
TRPS1-206ENST00000517323 ATP5SQ99766 215 aa12.15□□□□□ -0.46
TRPS1-206ENST00000517323 PLA2G2EQ9NZK7 142 aa12.15□□□□□ -0.46
TRPS1-206ENST00000517323 IGKV1OR2-108A0A075B7D4 117 aa12.15□□□□□ -0.47
TRPS1-206ENST00000517323 TRAV41A0A0B4J266 112 aa12.15□□□□□ -0.47
TRPS1-206ENST00000517323 EIF3GO75821 320 aaKnown RBP eCLIP12.15□□□□□ -0.47
TRPS1-206ENST00000517323 OR2J3O76001 311 aa12.15□□□□□ -0.47
TRPS1-206ENST00000517323 RAB11AP62491 216 aa12.15□□□□□ -0.47
TRPS1-206ENST00000517323 INS-IGF2F8WCM5 200 aa12.14□□□□□ -0.47
TRPS1-206ENST00000517323 TRIM77I1YAP6 450 aa12.14□□□□□ -0.47
TRPS1-206ENST00000517323 MT-CO2P00403 227 aa12.14□□□□□ -0.47
TRPS1-206ENST00000517323 HBG1P69891 147 aa12.14□□□□□ -0.47
TRPS1-206ENST00000517323 HBG2P69892 147 aa12.14□□□□□ -0.47
TRPS1-206ENST00000517323 GAMTQ14353 236 aa12.14□□□□□ -0.47
TRPS1-206ENST00000517323 TMED6Q8WW62 240 aa12.14□□□□□ -0.47
TRPS1-206ENST00000517323 KLK15Q9H2R5 256 aa12.14□□□□□ -0.47
TRPS1-206ENST00000517323 MFSD2BA6NFX1 497 aa12.13□□□□□ -0.47
TRPS1-206ENST00000517323 NDUFB8O95169 186 aa12.13□□□□□ -0.47
TRPS1-206ENST00000517323 RPP30P78346 268 aaKnown RBP12.13□□□□□ -0.47
TRPS1-206ENST00000517323 TTC9CQ8N5M4 171 aa12.13□□□□□ -0.47
TRPS1-206ENST00000517323 TEX29Q8N6K0 151 aa12.13□□□□□ -0.47
TRPS1-206ENST00000517323 UBAC2Q8NBM4 344 aa12.13□□□□□ -0.47
TRPS1-206ENST00000517323 OR1P1Q8NH06 330 aa12.13□□□□□ -0.47
TRPS1-206ENST00000517323 ATRQ13535 2644 aa12.13□□□□□ -0.47
TRPS1-206ENST00000517323 M0QZK8 103 aa12.13□□□□□ -0.47
TRPS1-206ENST00000517323 GATA2P23769 480 aaPredicted RBP12.13□□□□□ -0.47
TRPS1-206ENST00000517323 EXOSC2Q13868 293 aaKnown RBP12.13□□□□□ -0.47
TRPS1-206ENST00000517323 TEX261Q6UWH6 196 aa12.13□□□□□ -0.47
TRPS1-206ENST00000517323 TREML4Q6UXN2 200 aa12.13□□□□□ -0.47
TRPS1-206ENST00000517323 C16orf82Q7Z2V1 217 aa12.13□□□□□ -0.47
TRPS1-206ENST00000517323 UQCC1Q9NVA1 299 aa12.13□□□□□ -0.47
TRPS1-206ENST00000517323 CACFD1Q9UGQ2 172 aa12.13□□□□□ -0.47
TRPS1-206ENST00000517323 CRYGCP07315 174 aa12.12□□□□□ -0.47
TRPS1-206ENST00000517323 M6PRP20645 277 aa12.12□□□□□ -0.47
TRPS1-206ENST00000517323 AKR1C1Q04828 323 aa12.12□□□□□ -0.47
TRPS1-206ENST00000517323 CD69Q07108 199 aa12.12□□□□□ -0.47
TRPS1-206ENST00000517323 C19orf54Q5BKX5 351 aa12.12□□□□□ -0.47
TRPS1-206ENST00000517323 SLC16A13Q7RTY0 426 aa12.12□□□□□ -0.47
TRPS1-206ENST00000517323 SLC51BQ86UW2 128 aa12.12□□□□□ -0.47
TRPS1-206ENST00000517323 ZNF114Q8NC26 417 aa12.12□□□□□ -0.47
TRPS1-206ENST00000517323 SLC25A32Q9H2D1 315 aa12.12□□□□□ -0.47
TRPS1-206ENST00000517323 FBN1P35555 2871 aaKnown RBP12.12□□□□□ -0.47
TRPS1-206ENST00000517323 IGLV11-55A0A075B6I3 123 aa12.12□□□□□ -0.47
TRPS1-206ENST00000517323 NPIPB5A8MRT5 1133 aa12.12□□□□□ -0.47
TRPS1-206ENST00000517323 K7EIM0 57 aa12.12□□□□□ -0.47
TRPS1-206ENST00000517323 FGF7P21781 194 aa12.12□□□□□ -0.47
TRPS1-206ENST00000517323 ATP6V0CP27449 155 aa12.12□□□□□ -0.47
TRPS1-206ENST00000517323 RND2P52198 227 aa12.12□□□□□ -0.47
TRPS1-206ENST00000517323 TMEM182Q6ZP80 229 aaPredicted RBP12.12□□□□□ -0.47
TRPS1-206ENST00000517323 STPG2Q8N412 459 aa12.12□□□□□ -0.47
TRPS1-206ENST00000517323 NPIPB3Q92617 1050 aa12.12□□□□□ -0.47
TRPS1-206ENST00000517323 I3L2K1 104 aa12.11□□□□□ -0.47
TRPS1-206ENST00000517323 IGF1P05019 195 aa12.11□□□□□ -0.47
TRPS1-206ENST00000517323 FHITP49789 147 aa12.11□□□□□ -0.47
TRPS1-206ENST00000517323 SUB1P53999 127 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRPS1-206ENST00000517323 AKIRIN2Q53H80 203 aa12.11□□□□□ -0.47
TRPS1-206ENST00000517323 Q6ZSV7 163 aa12.11□□□□□ -0.47
TRPS1-206ENST00000517323 BAP18Q8IXM2 172 aa12.11□□□□□ -0.47
TRPS1-206ENST00000517323 ZNF680Q8NEM1 530 aa12.11□□□□□ -0.47
TRPS1-206ENST00000517323 SCARB1Q8WTV0 552 aa12.11□□□□□ -0.47
TRPS1-206ENST00000517323 TMEM147Q9BVK8 224 aa12.11□□□□□ -0.47
TRPS1-206ENST00000517323 NPFFR1Q9GZQ6 430 aa12.11□□□□□ -0.47
TRPS1-206ENST00000517323 LOC105371267A0A1B0GV96 52 aa12.11□□□□□ -0.47
TRPS1-206ENST00000517323 CRLF1O75462 422 aa12.11□□□□□ -0.47
TRPS1-206ENST00000517323 HILS1P60008 231 aa12.11□□□□□ -0.47
TRPS1-206ENST00000517323 CCDC28AQ8IWP9 274 aa12.11□□□□□ -0.47
TRPS1-206ENST00000517323 FAM110DQ8TAY7 271 aaPredicted RBP12.11□□□□□ -0.47
TRPS1-206ENST00000517323 MGST2Q99735 147 aa12.11□□□□□ -0.47
TRPS1-206ENST00000517323 WDR61Q9GZS3 305 aaKnown RBP12.11□□□□□ -0.47
TRPS1-206ENST00000517323 VSIRQ9H7M9 311 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms