RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 TTC41PQ6P2S7 1318 aa-3.29□□□□□ -2.94
SNORA40.16-201ENST00000517238 ANKRD50Q9ULJ7 1429 aa-3.29□□□□□ -2.94
SNORA40.16-201ENST00000517238 DNAH10Q8IVF4 4471 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 NINQ8N4C6 2090 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 TRAV17A0A0B4J275 112 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 A0A0J9YY99 117 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 PQLC2LA1A4F0 135 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 SYCE3A1L190 88 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 C9orf92A6NGG3 77 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 C9JAW5 83 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 XRCC2O43543 280 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 ERC2-IT1O76042 136 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 MT1EP04732 61 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 CLTAP09496 248 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 GSTM3P21266 225 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 GTF2E2P29084 291 aaKnown RBP-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 CASQ1P31415 396 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 CRYBB2P43320 205 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 FAM78BQ5VT40 261 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 CCDC70Q6NSX1 233 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 SPESP1Q6UW49 350 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 RASSF6Q6ZTQ3 369 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 OR56B2PQ8NGI1 322 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 ADAT3Q96EY9 351 aaPredicted RBP-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 PCTPQ9UKL6 214 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 ANAPC10Q9UM13 185 aa-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 VIRMAQ69YN4 1812 aaKnown RBP-3.3□□□□□ -2.94
SNORA40.16-201ENST00000517238 A0A1B0GW54 56 aa-3.31□□□□□ -2.94
SNORA40.16-201ENST00000517238 I3L4J1 428 aa-3.31□□□□□ -2.94
SNORA40.16-201ENST00000517238 TNNT2P45379 298 aaPredicted RBP-3.31□□□□□ -2.94
SNORA40.16-201ENST00000517238 PSMD4P55036 377 aaKnown RBP-3.31□□□□□ -2.94
SNORA40.16-201ENST00000517238 TSPAN5P62079 268 aa-3.31□□□□□ -2.94
SNORA40.16-201ENST00000517238 PAFAH1B2P68402 229 aa-3.31□□□□□ -2.94
SNORA40.16-201ENST00000517238 RPL18Q07020 188 aaKnown RBP-3.31□□□□□ -2.94
SNORA40.16-201ENST00000517238 TAF7Q15545 349 aaPredicted RBP-3.31□□□□□ -2.94
SNORA40.16-201ENST00000517238 CLEC6AQ6EIG7 209 aa-3.31□□□□□ -2.94
SNORA40.16-201ENST00000517238 EPGNQ6UW88 154 aa-3.31□□□□□ -2.94
SNORA40.16-201ENST00000517238 Q6ZRX8 168 aa-3.31□□□□□ -2.94
SNORA40.16-201ENST00000517238 GPHB5Q86YW7 130 aa-3.31□□□□□ -2.94
SNORA40.16-201ENST00000517238 CCDC43Q96MW1 224 aaKnown RBP-3.31□□□□□ -2.94
SNORA40.16-201ENST00000517238 FAM111AQ96PZ2 611 aa-3.31□□□□□ -2.94
SNORA40.16-201ENST00000517238 UTP23Q9BRU9 249 aaKnown RBP-3.31□□□□□ -2.94
SNORA40.16-201ENST00000517238 SUCNR1Q9BXA5 334 aa-3.31□□□□□ -2.94
SNORA40.16-201ENST00000517238 TP53AIP1Q9HCN2 124 aa-3.31□□□□□ -2.94
SNORA40.16-201ENST00000517238 FARSBQ9NSD9 589 aaKnown RBP-3.31□□□□□ -2.94
SNORA40.16-201ENST00000517238 UBAP1Q9NZ09 502 aa-3.31□□□□□ -2.94
SNORA40.16-201ENST00000517238 PCYT1BQ9Y5K3 369 aaPredicted RBP-3.31□□□□□ -2.94
SNORA40.16-201ENST00000517238 NUP98P52948 1817 aa-3.31□□□□□ -2.94
SNORA40.16-201ENST00000517238 TRBV9A0A0B4J1U6 114 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 TRBV6-1A0A0K0K1D8 114 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 SLC9B1P1A6NJY1 282 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 SNTNA6NMZ2 147 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 DFFAO00273 331 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 SCGB2A1O75556 95 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 GOSR1O95249 250 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 CD160O95971 181 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 GCGP01275 180 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 IGHV3-30P01768 117 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 HLA-DQB2P05538 268 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 IGHV3-30-5P0DP03 117 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 PPIBP23284 216 aaKnown RBP-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 GADD45AP24522 165 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 TAGLN2P37802 199 aaKnown RBP-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 HBG1P69891 147 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 HBG2P69892 147 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 ESRGQ1W209 222 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 SYPL2Q5VXT5 272 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 C4orf22Q6V702 233 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 OR4A15Q8NGL6 344 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 MT1LQ93083 61 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 SKA1Q96BD8 255 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 SDF2Q99470 211 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 CCDC90BQ9GZT6 254 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 OR51E2Q9H255 320 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 ADA2Q9NZK5 511 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 TMEM216Q9P0N5 145 aa-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 NOSIPQ9Y314 301 aaKnown RBP-3.32□□□□□ -2.94
SNORA40.16-201ENST00000517238 FAM135BQ49AJ0 1406 aa-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 TRAV26-1A0A087WT03 109 aa-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 TRAV8-2A0A0B4J237 113 aa-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 A0A1B0GX12 115 aa-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 FABP5P3A8MUU1 101 aa-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 GPR171O14626 319 aa-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 ATP6V1C1P21283 382 aa-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 PSMA5P28066 241 aa-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 S100A7P31151 101 aa-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 GCLMP48507 274 aa-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 TAS2R39P59534 338 aa-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 DEFA1P59665 94 aa-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 TRIP13Q15645 432 aaPredicted RBP-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 ACOT6Q3I5F7 207 aaPredicted RBP-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 C8orf74Q6P047 294 aa-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 SSX8Q7RTT4 187 aa-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 TTC29Q8NA56 475 aaPredicted RBP-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 OR4C5Q8NGB2 326 aa-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 RAB2BQ8WUD1 216 aa-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 SCGB3A1Q96QR1 104 aa-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 GGACTQ9BVM4 153 aa-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 NHP2Q9NX24 153 aaKnown RBP-3.33□□□□□ -2.94
SNORA40.16-201ENST00000517238 LYARQ9NX58 379 aaKnown RBP-3.33□□□□□ -2.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms