RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 DEFA4P12838 97 aa7.25□□□□□ -1.25
CPNE4-213ENST00000515418 BLOC1S1P78537 153 aa7.25□□□□□ -1.25
CPNE4-213ENST00000515418 CCL20P78556 96 aa7.25□□□□□ -1.25
CPNE4-213ENST00000515418 SRSF3P84103 164 aaKnown RBP7.25□□□□□ -1.25
CPNE4-213ENST00000515418 AKR1C1Q04828 323 aa7.25□□□□□ -1.25
CPNE4-213ENST00000515418 AANATQ16613 207 aa7.25□□□□□ -1.25
CPNE4-213ENST00000515418 GCSAMLQ5JQS6 135 aa7.25□□□□□ -1.25
CPNE4-213ENST00000515418 ACSM6Q6P461 480 aa7.25□□□□□ -1.25
CPNE4-213ENST00000515418 MISP3Q96FF7 219 aa7.25□□□□□ -1.25
CPNE4-213ENST00000515418 MGST2Q99735 147 aa7.25□□□□□ -1.25
CPNE4-213ENST00000515418 HSPB9Q9BQS6 159 aa7.25□□□□□ -1.25
CPNE4-213ENST00000515418 GGACTQ9BVM4 153 aa7.25□□□□□ -1.25
CPNE4-213ENST00000515418 WNT10AQ9GZT5 417 aa7.25□□□□□ -1.25
CPNE4-213ENST00000515418 NPVFQ9HCQ7 196 aa7.25□□□□□ -1.25
CPNE4-213ENST00000515418 PARP11Q9NR21 331 aa7.25□□□□□ -1.25
CPNE4-213ENST00000515418 IGHV7-81A0A0B4J1V7 117 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 UMAD1C9J7I0 102 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 TRIM77I1YAP6 450 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 EGR2P11161 476 aaPredicted RBP7.24□□□□□ -1.25
CPNE4-213ENST00000515418 OPRK1P41145 380 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 MTORP42345 2549 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 SUB1P53999 127 aaKnown RBP eCLIP7.24□□□□□ -1.25
CPNE4-213ENST00000515418 RAB2AP61019 212 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 CD69Q07108 199 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 SSX7Q7RTT5 188 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 CENPVQ7Z7K6 275 aaPredicted RBP7.24□□□□□ -1.25
CPNE4-213ENST00000515418 ZNF709Q8N972 641 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 MARC2Q969Z3 335 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 ACY3Q96HD9 319 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 RASL11BQ9BPW5 248 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 PSMG3Q9BT73 122 aaPredicted RBP7.24□□□□□ -1.25
CPNE4-213ENST00000515418 MED9Q9NWA0 146 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 LSM4Q9Y4Z0 139 aaKnown RBP7.24□□□□□ -1.25
CPNE4-213ENST00000515418 NF1P21359 2839 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 ANKRD34BA5PLL1 514 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 H3BUX3 64 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 HMGB3O15347 200 aaKnown RBP7.24□□□□□ -1.25
CPNE4-213ENST00000515418 GATA2P23769 480 aaPredicted RBP7.24□□□□□ -1.25
CPNE4-213ENST00000515418 RAB5CP51148 216 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 SERF2P84101 59 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 ZNF726P1Q15940 193 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 DEFB112Q30KQ8 113 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 FFAR4Q5NUL3 377 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 ASPHD1Q5U4P2 390 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 MIC13Q5XKP0 118 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 CYB5R2Q6BCY4 276 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 TEPPQ6URK8 271 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 RPP25LQ8N5L8 163 aaKnown RBP7.24□□□□□ -1.25
CPNE4-213ENST00000515418 LFNGQ8NES3 379 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 OR5T1Q8NG75 326 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 SFT2D1Q8WV19 159 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 SLC25A33Q9BSK2 321 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 TMEM231Q9H6L2 316 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 C1RLQ9NZP8 487 aa7.24□□□□□ -1.25
CPNE4-213ENST00000515418 I3L521 148 aa7.23□□□□□ -1.25
CPNE4-213ENST00000515418 J3QLI3 93 aa7.23□□□□□ -1.25
CPNE4-213ENST00000515418 TSPAN15O95858 294 aa7.23□□□□□ -1.25
CPNE4-213ENST00000515418 AMY1AP04745 511 aa7.23□□□□□ -1.25
CPNE4-213ENST00000515418 FBP1P09467 338 aa7.23□□□□□ -1.25
CPNE4-213ENST00000515418 FGF8P55075 233 aaPredicted RBP7.23□□□□□ -1.25
CPNE4-213ENST00000515418 ATP5IP56385 69 aaPredicted RBP7.23□□□□□ -1.25
CPNE4-213ENST00000515418 SLC16A13Q7RTY0 426 aa7.23□□□□□ -1.25
CPNE4-213ENST00000515418 OR1P1Q8NH06 330 aa7.23□□□□□ -1.25
CPNE4-213ENST00000515418 LYPD6BQ8NI32 183 aa7.23□□□□□ -1.25
CPNE4-213ENST00000515418 NPIPB3Q92617 1050 aa7.23□□□□□ -1.25
CPNE4-213ENST00000515418 ARPC1AQ92747 370 aa7.23□□□□□ -1.25
CPNE4-213ENST00000515418 GGTLC1Q9BX51 225 aa7.23□□□□□ -1.25
CPNE4-213ENST00000515418 TNFRSF19Q9NS68 423 aa7.23□□□□□ -1.25
CPNE4-213ENST00000515418 TIMM9Q9Y5J7 89 aa7.23□□□□□ -1.25
CPNE4-213ENST00000515418 F11RQ9Y624 299 aaKnown RBP7.23□□□□□ -1.25
CPNE4-213ENST00000515418 YIF1AO95070 293 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 SCAF4O95104 1147 aaKnown RBP7.22□□□□□ -1.25
CPNE4-213ENST00000515418 H2AFB1P0C5Y9 115 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 CTRB1P17538 263 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 S100A1P23297 94 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 OR10J1P30954 320 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 GPX4P36969 197 aaPredicted RBP7.22□□□□□ -1.25
CPNE4-213ENST00000515418 CTRB2Q6GPI1 263 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 SPSB3Q6PJ21 355 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 LCN15Q6UWW0 184 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 IL17RELQ6ZVW7 336 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 TMEM144Q7Z5S9 345 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 C5orf56Q8N8D9 126 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 RNASEH2CQ8TDP1 164 aaKnown RBP7.22□□□□□ -1.25
CPNE4-213ENST00000515418 RCC1LQ96I51 464 aaKnown RBP7.22□□□□□ -1.25
CPNE4-213ENST00000515418 RBM14Q96PK6 669 aaKnown RBP7.22□□□□□ -1.25
CPNE4-213ENST00000515418 GSX1Q9H4S2 264 aaPredicted RBP7.22□□□□□ -1.25
CPNE4-213ENST00000515418 S4R3C0 116 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 CUBNO60494 3623 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 OTOGQ6ZRI0 2925 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 C17orf112F2Z3M2 114 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 MPDU1O75352 247 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 MT-CO2P00403 227 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 HLA-DRB1P01911 266 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 DEFA5Q01523 94 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 TMEM41BQ5BJD5 291 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 C9orf152Q5JTZ5 239 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 PVRIGQ6DKI7 326 aa7.22□□□□□ -1.25
CPNE4-213ENST00000515418 HSD17B13Q7Z5P4 300 aaPredicted RBP7.22□□□□□ -1.25
CPNE4-213ENST00000515418 MRPL41Q8IXM3 137 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms