RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 CD83Q01151 205 aa16.33■□□□□ 0.2
LSM6-207ENST00000515311 FGL1Q08830 312 aa16.33■□□□□ 0.2
LSM6-207ENST00000515311 RNASEH2CQ8TDP1 164 aaKnown RBP16.33■□□□□ 0.2
LSM6-207ENST00000515311 USMG5Q96IX5 58 aa16.33■□□□□ 0.2
LSM6-207ENST00000515311 FBXL7Q9UJT9 491 aa16.33■□□□□ 0.2
LSM6-207ENST00000515311 STRAPQ9Y3F4 350 aaKnown RBP16.33■□□□□ 0.2
LSM6-207ENST00000515311 A0A0G2JLM5 398 aa16.32■□□□□ 0.2
LSM6-207ENST00000515311 C15orf62A8K5M9 175 aa16.32■□□□□ 0.2
LSM6-207ENST00000515311 H3BP45 60 aa16.32■□□□□ 0.2
LSM6-207ENST00000515311 OR2J3O76001 311 aa16.32■□□□□ 0.2
LSM6-207ENST00000515311 EXOSC2Q13868 293 aaKnown RBP16.32■□□□□ 0.2
LSM6-207ENST00000515311 KIAA0141Q14154 515 aaPredicted RBP16.32■□□□□ 0.2
LSM6-207ENST00000515311 SPANXN5Q5MJ07 72 aa16.32■□□□□ 0.2
LSM6-207ENST00000515311 PRSS54Q6PEW0 395 aa16.32■□□□□ 0.2
LSM6-207ENST00000515311 LCNL1Q6ZST4 164 aa16.32■□□□□ 0.2
LSM6-207ENST00000515311 UBE2E2Q96LR5 201 aa16.32■□□□□ 0.2
LSM6-207ENST00000515311 OR4C12Q96R67 309 aa16.32■□□□□ 0.2
LSM6-207ENST00000515311 E5RGE8 158 aa16.31■□□□□ 0.2
LSM6-207ENST00000515311 H0YIZ8 118 aa16.31■□□□□ 0.2
LSM6-207ENST00000515311 RAB11AP62491 216 aa16.31■□□□□ 0.2
LSM6-207ENST00000515311 C15orf32Q32M92 178 aa16.31■□□□□ 0.2
LSM6-207ENST00000515311 KRTAP21-3Q3LHN1 58 aa16.31■□□□□ 0.2
LSM6-207ENST00000515311 ZNF491Q8N8L2 437 aa16.31■□□□□ 0.2
LSM6-207ENST00000515311 OR2T35Q8NGX2 323 aa16.31■□□□□ 0.2
LSM6-207ENST00000515311 MISP3Q96FF7 219 aa16.31■□□□□ 0.2
LSM6-207ENST00000515311 CITED1Q99966 193 aa16.31■□□□□ 0.2
LSM6-207ENST00000515311 RNF126Q9BV68 326 aa16.31■□□□□ 0.2
LSM6-207ENST00000515311 LYRM2Q9NU23 88 aaPredicted RBP16.31■□□□□ 0.2
LSM6-207ENST00000515311 OR5AC2Q9NZP5 309 aa16.31■□□□□ 0.2
LSM6-207ENST00000515311 TCRBV4S1A1TA0A5B7 111 aa16.3■□□□□ 0.2
LSM6-207ENST00000515311 NDUFB8O95169 186 aa16.3■□□□□ 0.2
LSM6-207ENST00000515311 OR8U8P0C7N1 319 aa16.3■□□□□ 0.2
LSM6-207ENST00000515311 LYL1P12980 280 aa16.3■□□□□ 0.2
LSM6-207ENST00000515311 CDX1P47902 265 aaPredicted RBP16.3■□□□□ 0.2
LSM6-207ENST00000515311 ATP5G2Q06055 141 aa16.3■□□□□ 0.2
LSM6-207ENST00000515311 TMEM14EPQ6UXP3 125 aa16.3■□□□□ 0.2
LSM6-207ENST00000515311 C12orf54Q6X4T0 127 aa16.3■□□□□ 0.2
LSM6-207ENST00000515311 C11orf44Q8N8P7 122 aa16.3■□□□□ 0.2
LSM6-207ENST00000515311 VN1R17PQ8TDU5 208 aa16.3■□□□□ 0.2
LSM6-207ENST00000515311 CXorf58Q96LI9 332 aa16.3■□□□□ 0.2
LSM6-207ENST00000515311 CITED2Q99967 270 aaPredicted RBP16.3■□□□□ 0.2
LSM6-207ENST00000515311 ZNF747Q9BV97 191 aa16.3■□□□□ 0.2
LSM6-207ENST00000515311 TSSC4Q9Y5U2 329 aaPredicted RBP16.3■□□□□ 0.2
LSM6-207ENST00000515311 TRAV14DV4A0A0A6YYC5 116 aa16.29■□□□□ 0.2
LSM6-207ENST00000515311 I3L2K1 104 aa16.29■□□□□ 0.2
LSM6-207ENST00000515311 K7EIM0 57 aa16.29■□□□□ 0.2
LSM6-207ENST00000515311 IFNA4P05014 189 aa16.29■□□□□ 0.2
LSM6-207ENST00000515311 P2RY1P47900 373 aa16.29■□□□□ 0.2
LSM6-207ENST00000515311 THAP6Q8TBB0 222 aa16.29■□□□□ 0.2
LSM6-207ENST00000515311 MBD2Q9UBB5 411 aa16.29■□□□□ 0.2
LSM6-207ENST00000515311 STAB1Q9NY15 2570 aa16.28■□□□□ 0.2
LSM6-207ENST00000515311 SCAF4O95104 1147 aaKnown RBP16.28■□□□□ 0.2
LSM6-207ENST00000515311 CAV2P51636 162 aa16.28■□□□□ 0.2
LSM6-207ENST00000515311 DEFA5Q01523 94 aa16.28■□□□□ 0.2
LSM6-207ENST00000515311 C3orf56Q8N813 242 aa16.28■□□□□ 0.2
LSM6-207ENST00000515311 RANGRFQ9HD47 186 aaPredicted RBP16.28■□□□□ 0.2
LSM6-207ENST00000515311 RPS10-NUDT3A0A1W2PQS6 291 aa16.27■□□□□ 0.2
LSM6-207ENST00000515311 CCNKO75909 580 aa16.27■□□□□ 0.2
LSM6-207ENST00000515311 MT-CO2P00403 227 aa16.27■□□□□ 0.2
LSM6-207ENST00000515311 OPRK1P41145 380 aa16.27■□□□□ 0.2
LSM6-207ENST00000515311 KHDC1LQ5JSQ8 128 aa16.27■□□□□ 0.2
LSM6-207ENST00000515311 FAM209BQ5JX69 171 aa16.27■□□□□ 0.2
LSM6-207ENST00000515311 ETV3LQ6ZN32 361 aa16.27■□□□□ 0.2
LSM6-207ENST00000515311 NDUFA11Q86Y39 141 aa16.27■□□□□ 0.2
LSM6-207ENST00000515311 C4orf3Q8WVX3 66 aa16.27■□□□□ 0.2
LSM6-207ENST00000515311 EEF1AKMT3Q96AZ1 226 aa16.27■□□□□ 0.2
LSM6-207ENST00000515311 PINX1Q96BK5 328 aaKnown RBP16.27■□□□□ 0.2
LSM6-207ENST00000515311 ST6GAL2Q96JF0 529 aa16.27■□□□□ 0.2
LSM6-207ENST00000515311 ATP6V0BQ99437 205 aa16.27■□□□□ 0.2
LSM6-207ENST00000515311 MDFIQ99750 246 aa16.27■□□□□ 0.2
LSM6-207ENST00000515311 PAIP2BQ9ULR5 123 aaKnown RBP16.27■□□□□ 0.2
LSM6-207ENST00000515311 TRBV7-1A0A0A6YYK4 115 aa16.26■□□□□ 0.19
LSM6-207ENST00000515311 MFSD2BA6NFX1 497 aa16.26■□□□□ 0.19
LSM6-207ENST00000515311 PRSS46E5RG02 174 aa16.26■□□□□ 0.19
LSM6-207ENST00000515311 G3V3Q6 166 aa16.26■□□□□ 0.19
LSM6-207ENST00000515311 METTL15P1P0C7V9 234 aa16.26■□□□□ 0.19
LSM6-207ENST00000515311 GPX4P36969 197 aaPredicted RBP16.26■□□□□ 0.19
LSM6-207ENST00000515311 RUNX1Q01196 453 aa16.26■□□□□ 0.19
LSM6-207ENST00000515311 Q5BKY6 102 aa16.26■□□□□ 0.19
LSM6-207ENST00000515311 ETFRF1Q6IPR1 90 aa16.26■□□□□ 0.19
LSM6-207ENST00000515311 ZNF343Q6P1L6 599 aa16.26■□□□□ 0.19
LSM6-207ENST00000515311 AKAP14Q86UN6 197 aa16.26■□□□□ 0.19
LSM6-207ENST00000515311 SCARB1Q8WTV0 552 aa16.26■□□□□ 0.19
LSM6-207ENST00000515311 FNDC4Q9H6D8 234 aaPredicted RBP16.26■□□□□ 0.19
LSM6-207ENST00000515311 GNB4Q9HAV0 340 aa16.26■□□□□ 0.19
LSM6-207ENST00000515311 FAM24AA6NFZ4 105 aa16.25■□□□□ 0.19
LSM6-207ENST00000515311 PMS2P5A8MQ11 134 aa16.25■□□□□ 0.19
LSM6-207ENST00000515311 LGALS1P09382 135 aaKnown RBP16.25■□□□□ 0.19
LSM6-207ENST00000515311 SLC25A4P12235 298 aa16.25■□□□□ 0.19
LSM6-207ENST00000515311 FCGR2BP31994 310 aaPredicted RBP16.25■□□□□ 0.19
LSM6-207ENST00000515311 CD69Q07108 199 aa16.25■□□□□ 0.19
LSM6-207ENST00000515311 SHISA2Q6UWI4 295 aa16.25■□□□□ 0.19
LSM6-207ENST00000515311 STX12Q86Y82 276 aa16.25■□□□□ 0.19
LSM6-207ENST00000515311 TCTE3Q8IZS6 198 aa16.25■□□□□ 0.19
LSM6-207ENST00000515311 TMEM252Q8N6L7 170 aa16.25■□□□□ 0.19
LSM6-207ENST00000515311 ZNF502Q8TBZ5 544 aa16.25■□□□□ 0.19
LSM6-207ENST00000515311 CACNG8Q8WXS5 425 aa16.25■□□□□ 0.19
LSM6-207ENST00000515311 DCUN1D4Q92564 292 aa16.25■□□□□ 0.19
LSM6-207ENST00000515311 SLC25A31Q9H0C2 315 aa16.25■□□□□ 0.19
LSM6-207ENST00000515311 C21orf62Q9NYP8 219 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms