RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 C17orf58Q2M2W7 97 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 NMSQ5H8A3 153 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 FFAR4Q5NUL3 377 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 PRAMEF5Q5TYX0 476 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 NCR3LG1Q68D85 454 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 C11orf71Q6IPW1 123 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 FAM53AQ6NSI3 398 aaPredicted RBP3.57□□□□□ -1.84
CLDND1-228ENST00000513873 CFAP161Q6P656 301 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 CLEC2AQ6UVW9 174 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 BTNL3Q6UXE8 466 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 SLC25A48Q6ZT89 311 aaKnown RBP3.57□□□□□ -1.84
CLDND1-228ENST00000513873 PDPNQ86YL7 162 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 BAP18Q8IXM2 172 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 PDZD9Q8IXQ8 264 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 ZCCHC24Q8N2G6 241 aaKnown RBP3.57□□□□□ -1.84
CLDND1-228ENST00000513873 KIR3DL3Q8N743 410 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 TPRX1Q8N7U7 411 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 ZNF383Q8NA42 475 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 ZNF680Q8NEM1 530 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 OR11H4Q8NGC9 324 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 OR4D5Q8NGN0 318 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 OR1S2Q8NGQ3 325 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 OR52E5Q8NH55 327 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 OR4A5Q8NH83 315 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 STOML3Q8TAV4 291 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 TMEM190Q8WZ59 177 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 PINX1Q96BK5 328 aaKnown RBP3.57□□□□□ -1.84
CLDND1-228ENST00000513873 GNPNAT1Q96EK6 184 aaPredicted RBP3.57□□□□□ -1.84
CLDND1-228ENST00000513873 OR10C1Q96KK4 312 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 LITAFQ99732 161 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 DCTN5Q9BTE1 182 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 CLEC7AQ9BXN2 247 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 PATZ1Q9HBE1 687 aaKnown RBP3.57□□□□□ -1.84
CLDND1-228ENST00000513873 NUP50Q9UKX7 468 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 PRNDQ9UKY0 176 aa3.57□□□□□ -1.84
CLDND1-228ENST00000513873 DYSFO75923 2080 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 TENM1Q9UKZ4 2725 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 TRAV14DV4A0A0A6YYC5 116 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 IGHV3-43A0A0B4J1X8 118 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 CEBPZOSA8MTT3 80 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 C17orf98A8MV24 154 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 LEUTXA8MZ59 168 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 OOSP1A8MZH6 123 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 UMAD1C9J7I0 102 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 H7C2Y5 167 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 CYB5BO43169 146 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 SYNGR2O43760 224 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 CHST1O43916 411 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 SSSCA1O60232 199 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 SOD3P08294 240 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 IGHV1-8P0DP01 117 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 IGHV3-43DP0DP04 118 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 CXCL2P19875 107 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 COL8A2P25067 703 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 LOXP28300 417 aaPredicted RBP3.56□□□□□ -1.84
CLDND1-228ENST00000513873 DUTP33316 252 aaKnown RBP3.56□□□□□ -1.84
CLDND1-228ENST00000513873 LGALS7P47929 136 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 GNG10P50151 68 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 SUB1P53999 127 aaKnown RBP eCLIP3.56□□□□□ -1.84
CLDND1-228ENST00000513873 SPCS3P61009 180 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 GNB1P62873 340 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 IL15RAQ13261 267 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 RAB31Q13636 194 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 SNTB1Q13884 538 aaKnown RBP3.56□□□□□ -1.84
CLDND1-228ENST00000513873 VMA21Q3ZAQ7 101 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 CT45A1Q5HYN5 189 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 CLLU1Q5K131 121 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 FAM201AQ5SY85 155 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 WDR25Q64LD2 544 aaPredicted RBP3.56□□□□□ -1.84
CLDND1-228ENST00000513873 LAMTOR1Q6IAA8 161 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 TGIF2LXQ8IUE1 241 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 ABHD12Q8N2K0 398 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 ZNF709Q8N972 641 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 OR4C13Q8NGP0 309 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 CT45A3Q8NHU0 189 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 C8orf46Q8TAG6 207 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 NRGNQ92686 78 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 LHX4Q969G2 390 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 RPEQ96AT9 228 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 GPR146Q96CH1 333 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 FLYWCH2Q96CP2 140 aaKnown RBP3.56□□□□□ -1.84
CLDND1-228ENST00000513873 SMIM8Q96KF7 97 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 ASCL2Q99929 193 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 RNF5Q99942 180 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 AGMATQ9BSE5 352 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 RNF126Q9BV68 326 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 GGACTQ9BVM4 153 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 TMEM133Q9H2Q1 129 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 KCNIP2Q9NS61 270 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 C19orf12Q9NSK7 152 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 SLC35D1Q9NTN3 355 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 LYRM2Q9NU23 88 aaPredicted RBP3.56□□□□□ -1.84
CLDND1-228ENST00000513873 PSENENQ9NZ42 101 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 ONECUT1Q9UBC0 465 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 CACNG5Q9UF02 275 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 WASHC3Q9Y3C0 194 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 STRAPQ9Y3F4 350 aaKnown RBP3.56□□□□□ -1.84
CLDND1-228ENST00000513873 INSIG2Q9Y5U4 225 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 KPTNQ9Y664 436 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 MED12Q93074 2177 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms