RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 LINC00299Q6ZSB3 139 aa7.33□□□□□ -1.24
RNF4-221ENST00000513643 SGPP2Q8IWX5 399 aa7.33□□□□□ -1.24
RNF4-221ENST00000513643 LRTM2Q8N967 370 aa7.33□□□□□ -1.24
RNF4-221ENST00000513643 RRNAD1Q96FB5 475 aaKnown RBP7.33□□□□□ -1.24
RNF4-221ENST00000513643 TXN2Q99757 166 aa7.33□□□□□ -1.24
RNF4-221ENST00000513643 CHRDL1Q9BU40 450 aa7.33□□□□□ -1.24
RNF4-221ENST00000513643 PLEKHA3Q9HB20 300 aa7.33□□□□□ -1.24
RNF4-221ENST00000513643 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.33□□□□□ -1.24
RNF4-221ENST00000513643 MCUBQ9NWR8 336 aa7.33□□□□□ -1.24
RNF4-221ENST00000513643 TECRQ9NZ01 308 aaKnown RBP7.33□□□□□ -1.24
RNF4-221ENST00000513643 SHPKQ9UHJ6 478 aa7.33□□□□□ -1.24
RNF4-221ENST00000513643 KCNIP3Q9Y2W7 256 aa7.33□□□□□ -1.24
RNF4-221ENST00000513643 SMAD5-AS1Q9Y6J3 95 aa7.33□□□□□ -1.24
RNF4-221ENST00000513643 A6NHS1 94 aa7.32□□□□□ -1.24
RNF4-221ENST00000513643 K7EMT4 169 aa7.32□□□□□ -1.24
RNF4-221ENST00000513643 PITX3O75364 302 aa7.32□□□□□ -1.24
RNF4-221ENST00000513643 BTCP35070 178 aa7.32□□□□□ -1.24
RNF4-221ENST00000513643 AKR1C2P52895 323 aa7.32□□□□□ -1.24
RNF4-221ENST00000513643 ERHP84090 104 aaKnown RBP7.32□□□□□ -1.24
RNF4-221ENST00000513643 CD300EQ496F6 205 aaPredicted RBP7.32□□□□□ -1.24
RNF4-221ENST00000513643 TMEM128Q5BJH2 165 aa7.32□□□□□ -1.24
RNF4-221ENST00000513643 TMEM268Q5VZI3 342 aa7.32□□□□□ -1.24
RNF4-221ENST00000513643 PLET1Q6UQ28 207 aa7.32□□□□□ -1.24
RNF4-221ENST00000513643 LINC00322Q6ZN03 302 aaPredicted RBP7.32□□□□□ -1.24
RNF4-221ENST00000513643 SLC35G3Q8N808 338 aa7.32□□□□□ -1.24
RNF4-221ENST00000513643 TMEM170AQ8WVE7 144 aa7.32□□□□□ -1.24
RNF4-221ENST00000513643 TMEM190Q8WZ59 177 aa7.32□□□□□ -1.24
RNF4-221ENST00000513643 MARC2Q969Z3 335 aa7.32□□□□□ -1.24
RNF4-221ENST00000513643 IGHV3-21A0A0B4J1V1 117 aa7.31□□□□□ -1.24
RNF4-221ENST00000513643 OR2T8A6NH00 312 aa7.31□□□□□ -1.24
RNF4-221ENST00000513643 NDUFA4O00483 81 aa7.31□□□□□ -1.24
RNF4-221ENST00000513643 MT-CO2P00403 227 aa7.31□□□□□ -1.24
RNF4-221ENST00000513643 MFAP4P55083 255 aa7.31□□□□□ -1.24
RNF4-221ENST00000513643 ANKRD55Q3KP44 614 aa7.31□□□□□ -1.24
RNF4-221ENST00000513643 TM4SF20Q53R12 229 aa7.31□□□□□ -1.24
RNF4-221ENST00000513643 SPINK9Q5DT21 86 aa7.31□□□□□ -1.24
RNF4-221ENST00000513643 LCN12Q6JVE5 192 aa7.31□□□□□ -1.24
RNF4-221ENST00000513643 LYZL2Q7Z4W2 148 aa7.31□□□□□ -1.24
RNF4-221ENST00000513643 OR10C1Q96KK4 312 aa7.31□□□□□ -1.24
RNF4-221ENST00000513643 FNDC4Q9H6D8 234 aaPredicted RBP7.31□□□□□ -1.24
RNF4-221ENST00000513643 GAR1Q9NY12 217 aaKnown RBP7.31□□□□□ -1.24
RNF4-221ENST00000513643 PRR13Q9NZ81 148 aa7.31□□□□□ -1.24
RNF4-221ENST00000513643 MRPL27Q9P0M9 148 aaKnown RBP7.31□□□□□ -1.24
RNF4-221ENST00000513643 HSPB7Q9UBY9 170 aa7.31□□□□□ -1.24
RNF4-221ENST00000513643 CACNG5Q9UF02 275 aa7.31□□□□□ -1.24
RNF4-221ENST00000513643 CACFD1Q9UGQ2 172 aa7.31□□□□□ -1.24
RNF4-221ENST00000513643 MLXQ9UH92 298 aa7.31□□□□□ -1.24
RNF4-221ENST00000513643 DUXBA0A1W2PPF3 345 aa7.3□□□□□ -1.24
RNF4-221ENST00000513643 NAP1L6A6NFF2 107 aa7.3□□□□□ -1.24
RNF4-221ENST00000513643 PLA2G10O15496 165 aa7.3□□□□□ -1.24
RNF4-221ENST00000513643 NDUFB6O95139 128 aa7.3□□□□□ -1.24
RNF4-221ENST00000513643 IFNA17P01571 189 aa7.3□□□□□ -1.24
RNF4-221ENST00000513643 FRMD6-AS1P0C7T7 363 aa7.3□□□□□ -1.24
RNF4-221ENST00000513643 IGHV4-30-4P0DP06 118 aa7.3□□□□□ -1.24
RNF4-221ENST00000513643 SLC25A6P12236 298 aa7.3□□□□□ -1.24
RNF4-221ENST00000513643 IL7P13232 177 aa7.3□□□□□ -1.24
RNF4-221ENST00000513643 AKR1C4P17516 323 aa7.3□□□□□ -1.24
RNF4-221ENST00000513643 CCR6P51684 374 aa7.3□□□□□ -1.24
RNF4-221ENST00000513643 SRPXP78539 464 aa7.3□□□□□ -1.24
RNF4-221ENST00000513643 CD69Q07108 199 aa7.3□□□□□ -1.24
RNF4-221ENST00000513643 C2orf83Q53S99 150 aa7.3□□□□□ -1.24
RNF4-221ENST00000513643 C11orf87Q6NUJ2 197 aa7.3□□□□□ -1.24
RNF4-221ENST00000513643 SBSPONQ8IVN8 264 aa7.3□□□□□ -1.24
RNF4-221ENST00000513643 LGI3Q8N145 548 aa7.3□□□□□ -1.24
RNF4-221ENST00000513643 UXS1Q8NBZ7 420 aa7.3□□□□□ -1.24
RNF4-221ENST00000513643 CACNG8Q8WXS5 425 aa7.3□□□□□ -1.24
RNF4-221ENST00000513643 MRPL36Q9P0J6 103 aaKnown RBP7.3□□□□□ -1.24
RNF4-221ENST00000513643 UFC1Q9Y3C8 167 aa7.3□□□□□ -1.24
RNF4-221ENST00000513643 TRAV25A0A0B4J276 109 aa7.29□□□□□ -1.24
RNF4-221ENST00000513643 IGHV3-35A0A0C4DH35 117 aa7.29□□□□□ -1.24
RNF4-221ENST00000513643 A0A1B0GU03 582 aa7.29□□□□□ -1.24
RNF4-221ENST00000513643 ZNF320A2RRD8 509 aa7.29□□□□□ -1.24
RNF4-221ENST00000513643 C15orf62A8K5M9 175 aa7.29□□□□□ -1.24
RNF4-221ENST00000513643 CORTO00230 105 aa7.29□□□□□ -1.24
RNF4-221ENST00000513643 SFT2D2O95562 160 aa7.29□□□□□ -1.24
RNF4-221ENST00000513643 LY86O95711 162 aa7.29□□□□□ -1.24
RNF4-221ENST00000513643 TMEM50AO95807 157 aa7.29□□□□□ -1.24
RNF4-221ENST00000513643 SULT1A3P0DMM9 295 aa7.29□□□□□ -1.24
RNF4-221ENST00000513643 SULT1A4P0DMN0 295 aa7.29□□□□□ -1.24
RNF4-221ENST00000513643 ANXA3P12429 323 aa7.29□□□□□ -1.24
RNF4-221ENST00000513643 SNCAP37840 140 aa7.29□□□□□ -1.24
RNF4-221ENST00000513643 HTR2BP41595 481 aa7.29□□□□□ -1.24
RNF4-221ENST00000513643 UBE2MP61081 183 aaKnown RBP7.29□□□□□ -1.24
RNF4-221ENST00000513643 TNFRSF9Q07011 255 aa7.29□□□□□ -1.24
RNF4-221ENST00000513643 PPP1R1AQ13522 171 aa7.29□□□□□ -1.24
RNF4-221ENST00000513643 RBMS2Q15434 407 aaKnown RBP7.29□□□□□ -1.24
RNF4-221ENST00000513643 MLANAQ16655 118 aa7.29□□□□□ -1.24
RNF4-221ENST00000513643 TMEM61Q8N0U2 210 aa7.29□□□□□ -1.24
RNF4-221ENST00000513643 OR4X1Q8NH49 305 aa7.29□□□□□ -1.24
RNF4-221ENST00000513643 MISP3Q96FF7 219 aa7.29□□□□□ -1.24
RNF4-221ENST00000513643 C7orf50Q9BRJ6 194 aaKnown RBP7.29□□□□□ -1.24
RNF4-221ENST00000513643 PALMDQ9NP74 551 aa7.29□□□□□ -1.24
RNF4-221ENST00000513643 DAZ1Q9NQZ3 744 aaKnown RBP7.29□□□□□ -1.24
RNF4-221ENST00000513643 PIGBOS1A0A0B4J2F0 54 aa7.28□□□□□ -1.24
RNF4-221ENST00000513643 IGHV3-48P01763 117 aa7.28□□□□□ -1.24
RNF4-221ENST00000513643 NPBWR1P48145 328 aa7.28□□□□□ -1.24
RNF4-221ENST00000513643 SUB1P53999 127 aaKnown RBP eCLIP7.28□□□□□ -1.24
RNF4-221ENST00000513643 SMCO1Q147U7 214 aa7.28□□□□□ -1.24
RNF4-221ENST00000513643 ZNF57Q68EA5 555 aaPredicted RBP7.28□□□□□ -1.24
RNF4-221ENST00000513643 TMED4Q7Z7H5 227 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms