RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 TMEM17Q86X19 198 aa7□□□□□ -1.29
TCOF1-212ENST00000513538 FCAMRQ8WWV6 532 aa7□□□□□ -1.29
TCOF1-212ENST00000513538 LSM10Q969L4 123 aaKnown RBP7□□□□□ -1.29
TCOF1-212ENST00000513538 MOB3AQ96BX8 217 aa7□□□□□ -1.29
TCOF1-212ENST00000513538 NAA50Q9GZZ1 169 aaKnown RBP7□□□□□ -1.29
TCOF1-212ENST00000513538 OR51B2Q9Y5P1 312 aa7□□□□□ -1.29
TCOF1-212ENST00000513538 DNAH2Q9P225 4427 aa7□□□□□ -1.29
TCOF1-212ENST00000513538 IGHV4-28A0A0C4DH34 117 aa6.99□□□□□ -1.29
TCOF1-212ENST00000513538 J3QL48 77 aa6.99□□□□□ -1.29
TCOF1-212ENST00000513538 GABARAPO95166 117 aa6.99□□□□□ -1.29
TCOF1-212ENST00000513538 APOA1P02647 267 aa6.99□□□□□ -1.29
TCOF1-212ENST00000513538 RLN1P04808 185 aa6.99□□□□□ -1.29
TCOF1-212ENST00000513538 ELK1P19419 428 aa6.99□□□□□ -1.29
TCOF1-212ENST00000513538 PRSS3P35030 304 aa6.99□□□□□ -1.29
TCOF1-212ENST00000513538 G6PCP35575 357 aa6.99□□□□□ -1.29
TCOF1-212ENST00000513538 LPAR6P43657 344 aa6.99□□□□□ -1.29
TCOF1-212ENST00000513538 DEFB131AP59861 70 aa6.99□□□□□ -1.29
TCOF1-212ENST00000513538 TMEM187Q14656 261 aa6.99□□□□□ -1.29
TCOF1-212ENST00000513538 Q6ZTC4 211 aa6.99□□□□□ -1.29
TCOF1-212ENST00000513538 TCF24Q7RTU0 167 aa6.99□□□□□ -1.29
TCOF1-212ENST00000513538 CADM3Q8N126 398 aa6.99□□□□□ -1.29
TCOF1-212ENST00000513538 ST8SIA2Q92186 375 aa6.99□□□□□ -1.29
TCOF1-212ENST00000513538 DGCR14Q96DF8 476 aaKnown RBP6.99□□□□□ -1.29
TCOF1-212ENST00000513538 SCRT1Q9BWW7 348 aa6.99□□□□□ -1.29
TCOF1-212ENST00000513538 KRTAP4-5Q9BYR2 181 aa6.99□□□□□ -1.29
TCOF1-212ENST00000513538 IGHV4-4A0A075B6R2 117 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 ELOA3CA0A087WX78 387 aaPredicted RBP6.98□□□□□ -1.29
TCOF1-212ENST00000513538 IGHV3-66A0A0C4DH42 116 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 C15orf61A6NNL5 157 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 RTL8CO15255 209 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 CYB5BO43169 146 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 PGLYRP1O75594 196 aaPredicted RBP6.98□□□□□ -1.29
TCOF1-212ENST00000513538 YIF1AO95070 293 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 KRASP01116 189 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 PMP2P02689 132 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 C4BPBP20851 252 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 F2RP25116 425 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 HLA-DMBP28068 263 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 ALDH3B2P48448 385 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 ERVK-16P61578 105 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 RELQ04864 619 aaPredicted RBP6.98□□□□□ -1.29
TCOF1-212ENST00000513538 OR1P1Q8NH06 330 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 ZNF2Q9BSG1 426 aaPredicted RBP6.98□□□□□ -1.29
TCOF1-212ENST00000513538 NXF2Q9GZY0 626 aaKnown RBP6.98□□□□□ -1.29
TCOF1-212ENST00000513538 FXYD6Q9H0Q3 95 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 MS4A6AQ9H2W1 248 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 HRH4Q9H3N8 390 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 VSIRQ9H7M9 311 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 IFT46Q9NQC8 304 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 EHFQ9NZC4 300 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 COMMD3Q9UBI1 195 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 X6R8D5 127 aa6.98□□□□□ -1.29
TCOF1-212ENST00000513538 TRAV14DV4A0A0A6YYC5 116 aa6.97□□□□□ -1.29
TCOF1-212ENST00000513538 C11orf94C9JXX5 98 aa6.97□□□□□ -1.29
TCOF1-212ENST00000513538 HPGDSO60760 199 aa6.97□□□□□ -1.29
TCOF1-212ENST00000513538 DFFBO76075 338 aa6.97□□□□□ -1.29
TCOF1-212ENST00000513538 MT-CO2P00403 227 aa6.97□□□□□ -1.29
TCOF1-212ENST00000513538 RORCP51449 518 aa6.97□□□□□ -1.29
TCOF1-212ENST00000513538 CMC4P56277 68 aaPredicted RBP6.97□□□□□ -1.29
TCOF1-212ENST00000513538 TOMM20LQ6UXN7 152 aa6.97□□□□□ -1.29
TCOF1-212ENST00000513538 LINC00336Q6ZUF6 198 aa6.97□□□□□ -1.29
TCOF1-212ENST00000513538 TRPT1Q86TN4 253 aaKnown RBP6.97□□□□□ -1.29
TCOF1-212ENST00000513538 BORCS5Q969J3 196 aa6.97□□□□□ -1.29
TCOF1-212ENST00000513538 MISP3Q96FF7 219 aa6.97□□□□□ -1.29
TCOF1-212ENST00000513538 ZFAND3Q9H8U3 227 aa6.97□□□□□ -1.29
TCOF1-212ENST00000513538 SCPEP1Q9HB40 452 aa6.97□□□□□ -1.29
TCOF1-212ENST00000513538 TMEM14BQ9NUH8 114 aa6.97□□□□□ -1.29
TCOF1-212ENST00000513538 PRNDQ9UKY0 176 aa6.97□□□□□ -1.29
TCOF1-212ENST00000513538 CELA1Q9UNI1 258 aa6.97□□□□□ -1.29
TCOF1-212ENST00000513538 RYR1P21817 5038 aa6.97□□□□□ -1.29
TCOF1-212ENST00000513538 DYNC1H1Q14204 4646 aaKnown RBP6.97□□□□□ -1.29
TCOF1-212ENST00000513538 A0A1B0GU03 582 aa6.96□□□□□ -1.3
TCOF1-212ENST00000513538 ZNF705EA8MWA4 302 aaPredicted RBP6.96□□□□□ -1.3
TCOF1-212ENST00000513538 ST8SIA3O43173 380 aa6.96□□□□□ -1.3
TCOF1-212ENST00000513538 IGKV1-39P01597 117 aa6.96□□□□□ -1.3
TCOF1-212ENST00000513538 IGKV1D-39P04432 117 aa6.96□□□□□ -1.3
TCOF1-212ENST00000513538 MED14OSP0DP75 135 aa6.96□□□□□ -1.3
TCOF1-212ENST00000513538 HLA-DMAP28067 261 aa6.96□□□□□ -1.3
TCOF1-212ENST00000513538 HRH1P35367 487 aa6.96□□□□□ -1.3
TCOF1-212ENST00000513538 MFAP4P55083 255 aa6.96□□□□□ -1.3
TCOF1-212ENST00000513538 UCP3P55916 312 aa6.96□□□□□ -1.3
TCOF1-212ENST00000513538 TAS2R46P59540 309 aa6.96□□□□□ -1.3
TCOF1-212ENST00000513538 HERV-K104P61576 105 aa6.96□□□□□ -1.3
TCOF1-212ENST00000513538 ZNF767PQ75MW2 155 aa6.96□□□□□ -1.3
TCOF1-212ENST00000513538 ZNF114Q8NC26 417 aa6.96□□□□□ -1.3
TCOF1-212ENST00000513538 OR5H2Q8NGV7 314 aa6.96□□□□□ -1.3
TCOF1-212ENST00000513538 OR6F1Q8NGZ6 308 aa6.96□□□□□ -1.3
TCOF1-212ENST00000513538 FAM212BQ9NTI7 297 aaPredicted RBP6.96□□□□□ -1.3
TCOF1-212ENST00000513538 DNAH17Q9UFH2 4485 aa6.95□□□□□ -1.3
TCOF1-212ENST00000513538 TRAV10A0A0B4J240 114 aa6.95□□□□□ -1.3
TCOF1-212ENST00000513538 SMIM31A0A1B0GVY4 71 aa6.95□□□□□ -1.3
TCOF1-212ENST00000513538 PRSS29PA6NIE9 313 aa6.95□□□□□ -1.3
TCOF1-212ENST00000513538 KNCNA6PVL3 124 aa6.95□□□□□ -1.3
TCOF1-212ENST00000513538 GPR31O00270 319 aa6.95□□□□□ -1.3
TCOF1-212ENST00000513538 SNAPC5O75971 98 aa6.95□□□□□ -1.3
TCOF1-212ENST00000513538 ZNF182P17025 639 aaPredicted RBP6.95□□□□□ -1.3
TCOF1-212ENST00000513538 GPR107Q5VW38 600 aa6.95□□□□□ -1.3
TCOF1-212ENST00000513538 LHFPL1Q86WI0 220 aa6.95□□□□□ -1.3
TCOF1-212ENST00000513538 SNX29P2Q8IUI4 249 aa6.95□□□□□ -1.3
TCOF1-212ENST00000513538 CSNK1G2-AS1Q8NCQ2 148 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms