RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 DEDD2Q8WXF8 326 aa13.42□□□□□ -0.26
DDR1-272ENST00000513243 CHRDL1Q9BU40 450 aa13.42□□□□□ -0.26
DDR1-272ENST00000513243 ZNF436Q9C0F3 470 aaPredicted RBP13.42□□□□□ -0.26
DDR1-272ENST00000513243 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.42□□□□□ -0.26
DDR1-272ENST00000513243 CACNG5Q9UF02 275 aa13.42□□□□□ -0.26
DDR1-272ENST00000513243 MT-CO2P00403 227 aa13.41□□□□□ -0.26
DDR1-272ENST00000513243 IGHV3-48P01763 117 aa13.41□□□□□ -0.26
DDR1-272ENST00000513243 ADMP35318 185 aa13.41□□□□□ -0.26
DDR1-272ENST00000513243 SNCAP37840 140 aa13.41□□□□□ -0.26
DDR1-272ENST00000513243 Q56UQ5 140 aa13.41□□□□□ -0.26
DDR1-272ENST00000513243 ZNF57Q68EA5 555 aaPredicted RBP13.41□□□□□ -0.26
DDR1-272ENST00000513243 SPSB3Q6PJ21 355 aa13.41□□□□□ -0.26
DDR1-272ENST00000513243 IL22RA2Q969J5 263 aa13.41□□□□□ -0.26
DDR1-272ENST00000513243 PINX1Q96BK5 328 aaKnown RBP13.41□□□□□ -0.26
DDR1-272ENST00000513243 SDHCQ99643 169 aaPredicted RBP13.41□□□□□ -0.26
DDR1-272ENST00000513243 ASCL2Q99929 193 aa13.41□□□□□ -0.26
DDR1-272ENST00000513243 TECRQ9NZ01 308 aaKnown RBP13.41□□□□□ -0.26
DDR1-272ENST00000513243 SELENOKQ9Y6D0 94 aa13.41□□□□□ -0.26
DDR1-272ENST00000513243 COL7A1Q02388 2944 aa13.41□□□□□ -0.26
DDR1-272ENST00000513243 CTSGP08311 255 aa13.4□□□□□ -0.26
DDR1-272ENST00000513243 RNASE2P10153 161 aaKnown RBP13.4□□□□□ -0.26
DDR1-272ENST00000513243 HOXA1P49639 335 aaPredicted RBP13.4□□□□□ -0.26
DDR1-272ENST00000513243 SPCS3P61009 180 aa13.4□□□□□ -0.26
DDR1-272ENST00000513243 PVRIGQ6DKI7 326 aa13.4□□□□□ -0.26
DDR1-272ENST00000513243 TMED4Q7Z7H5 227 aa13.4□□□□□ -0.26
DDR1-272ENST00000513243 UXS1Q8NBZ7 420 aa13.4□□□□□ -0.26
DDR1-272ENST00000513243 OR52E5Q8NH55 327 aa13.4□□□□□ -0.26
DDR1-272ENST00000513243 SLC25A21Q9BQT8 299 aaPredicted RBP13.4□□□□□ -0.26
DDR1-272ENST00000513243 PALMDQ9NP74 551 aa13.4□□□□□ -0.26
DDR1-272ENST00000513243 DNAH9Q9NYC9 4486 aa13.39□□□□□ -0.27
DDR1-272ENST00000513243 ZNF785A8K8V0 405 aa13.39□□□□□ -0.27
DDR1-272ENST00000513243 FRMD6-AS1P0C7T7 363 aa13.39□□□□□ -0.27
DDR1-272ENST00000513243 NHLRC4P0CG21 123 aaPredicted RBP13.39□□□□□ -0.27
DDR1-272ENST00000513243 C8orf88P0DMB2 117 aa13.39□□□□□ -0.27
DDR1-272ENST00000513243 FCGR2BP31994 310 aaPredicted RBP13.39□□□□□ -0.27
DDR1-272ENST00000513243 MFAP4P55083 255 aa13.39□□□□□ -0.27
DDR1-272ENST00000513243 TMEM190Q8WZ59 177 aa13.39□□□□□ -0.27
DDR1-272ENST00000513243 ZNF414Q96IQ9 312 aa13.39□□□□□ -0.27
DDR1-272ENST00000513243 TXN2Q99757 166 aa13.39□□□□□ -0.27
DDR1-272ENST00000513243 ENY2Q9NPA8 101 aa13.39□□□□□ -0.27
DDR1-272ENST00000513243 GAR1Q9NY12 217 aaKnown RBP13.39□□□□□ -0.27
DDR1-272ENST00000513243 MLXQ9UH92 298 aa13.39□□□□□ -0.27
DDR1-272ENST00000513243 UFC1Q9Y3C8 167 aa13.39□□□□□ -0.27
DDR1-272ENST00000513243 A0A0B4J2A0 478 aa13.38□□□□□ -0.27
DDR1-272ENST00000513243 NDUFA4O00483 81 aa13.38□□□□□ -0.27
DDR1-272ENST00000513243 IGHV4-30-4P0DP06 118 aa13.38□□□□□ -0.27
DDR1-272ENST00000513243 ANXA3P12429 323 aa13.38□□□□□ -0.27
DDR1-272ENST00000513243 SUB1P53999 127 aaKnown RBP eCLIP13.38□□□□□ -0.27
DDR1-272ENST00000513243 ELLP55199 621 aaPredicted RBP13.38□□□□□ -0.27
DDR1-272ENST00000513243 BSXQ3C1V8 233 aa13.38□□□□□ -0.27
DDR1-272ENST00000513243 TMEM128Q5BJH2 165 aa13.38□□□□□ -0.27
DDR1-272ENST00000513243 NMSQ5H8A3 153 aa13.38□□□□□ -0.27
DDR1-272ENST00000513243 TRIQKQ629K1 86 aa13.38□□□□□ -0.27
DDR1-272ENST00000513243 LYZL2Q7Z4W2 148 aa13.38□□□□□ -0.27
DDR1-272ENST00000513243 SBSPONQ8IVN8 264 aa13.38□□□□□ -0.27
DDR1-272ENST00000513243 LGI3Q8N145 548 aa13.38□□□□□ -0.27
DDR1-272ENST00000513243 MARC2Q969Z3 335 aa13.38□□□□□ -0.27
DDR1-272ENST00000513243 SHPKQ9UHJ6 478 aa13.38□□□□□ -0.27
DDR1-272ENST00000513243 SULT1A3P0DMM9 295 aa13.37□□□□□ -0.27
DDR1-272ENST00000513243 SULT1A4P0DMN0 295 aa13.37□□□□□ -0.27
DDR1-272ENST00000513243 INPP1P49441 399 aa13.37□□□□□ -0.27
DDR1-272ENST00000513243 CCR6P51684 374 aa13.37□□□□□ -0.27
DDR1-272ENST00000513243 SRPXP78539 464 aa13.37□□□□□ -0.27
DDR1-272ENST00000513243 GTSCR1Q86UQ5 136 aa13.37□□□□□ -0.27
DDR1-272ENST00000513243 TMEM61Q8N0U2 210 aa13.37□□□□□ -0.27
DDR1-272ENST00000513243 WDR89Q96FK6 387 aaPredicted RBP13.37□□□□□ -0.27
DDR1-272ENST00000513243 C19orf73Q9NVV2 129 aa13.37□□□□□ -0.27
DDR1-272ENST00000513243 MRPL27Q9P0M9 148 aaKnown RBP13.37□□□□□ -0.27
DDR1-272ENST00000513243 IGHV3OR16-8A0A075B7F1 116 aa13.36□□□□□ -0.27
DDR1-272ENST00000513243 A8MZ25 164 aa13.36□□□□□ -0.27
DDR1-272ENST00000513243 NUPL2O15504 423 aaKnown RBP13.36□□□□□ -0.27
DDR1-272ENST00000513243 NXPH3O95157 252 aa13.36□□□□□ -0.27
DDR1-272ENST00000513243 GUCA2BQ16661 112 aa13.36□□□□□ -0.27
DDR1-272ENST00000513243 BTNL8Q6UX41 500 aa13.36□□□□□ -0.27
DDR1-272ENST00000513243 C20orf24Q9BUV8 137 aa13.36□□□□□ -0.27
DDR1-272ENST00000513243 HEYLQ9NQ87 328 aaPredicted RBP13.36□□□□□ -0.27
DDR1-272ENST00000513243 LINC00854A0A1B0GVQ3 168 aa13.35□□□□□ -0.27
DDR1-272ENST00000513243 CEBPZOSA8MTT3 80 aa13.35□□□□□ -0.27
DDR1-272ENST00000513243 CORTO00230 105 aa13.35□□□□□ -0.27
DDR1-272ENST00000513243 GNG7O60262 68 aa13.35□□□□□ -0.27
DDR1-272ENST00000513243 VAMP1P23763 118 aa13.35□□□□□ -0.27
DDR1-272ENST00000513243 CD81P60033 236 aa13.35□□□□□ -0.27
DDR1-272ENST00000513243 SMCO1Q147U7 214 aa13.35□□□□□ -0.27
DDR1-272ENST00000513243 RBMS2Q15434 407 aaKnown RBP13.35□□□□□ -0.27
DDR1-272ENST00000513243 MLANAQ16655 118 aa13.35□□□□□ -0.27
DDR1-272ENST00000513243 ANKRD55Q3KP44 614 aa13.35□□□□□ -0.27
DDR1-272ENST00000513243 DUSP18Q8NEJ0 188 aa13.35□□□□□ -0.27
DDR1-272ENST00000513243 FNDC4Q9H6D8 234 aaPredicted RBP13.35□□□□□ -0.27
DDR1-272ENST00000513243 DAZ1Q9NQZ3 744 aaKnown RBP13.35□□□□□ -0.27
DDR1-272ENST00000513243 NAP1L6A6NFF2 107 aa13.34□□□□□ -0.27
DDR1-272ENST00000513243 K7EMT4 169 aa13.34□□□□□ -0.27
DDR1-272ENST00000513243 ZNF207O43670 478 aaKnown RBP13.34□□□□□ -0.27
DDR1-272ENST00000513243 CD7P09564 240 aa13.34□□□□□ -0.27
DDR1-272ENST00000513243 IL7P13232 177 aa13.34□□□□□ -0.27
DDR1-272ENST00000513243 HTR2BP41595 481 aa13.34□□□□□ -0.27
DDR1-272ENST00000513243 RELQ04864 619 aaPredicted RBP13.34□□□□□ -0.27
DDR1-272ENST00000513243 PPP1R1AQ13522 171 aa13.34□□□□□ -0.27
DDR1-272ENST00000513243 CENPSQ8N2Z9 138 aa13.34□□□□□ -0.27
DDR1-272ENST00000513243 NEURL2Q9BR09 285 aa13.34□□□□□ -0.27
DDR1-272ENST00000513243 MRPL36Q9P0J6 103 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms