RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 CD36P16671 472 aa6.16□□□□□ -1.42
CLCN3-208ENST00000512813 GBX2P52951 348 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-208ENST00000512813 AP2S1P53680 142 aaPredicted RBP6.16□□□□□ -1.42
CLCN3-208ENST00000512813 DEFB1P60022 68 aa6.16□□□□□ -1.42
CLCN3-208ENST00000512813 OR8J1Q8NGP2 316 aa6.16□□□□□ -1.42
CLCN3-208ENST00000512813 CMTM5Q96DZ9 223 aa6.16□□□□□ -1.42
CLCN3-208ENST00000512813 NARS2Q96I59 477 aaKnown RBP6.16□□□□□ -1.42
CLCN3-208ENST00000512813 LINC01600Q96MT4 127 aa6.16□□□□□ -1.42
CLCN3-208ENST00000512813 PAXXQ9BUH6 204 aa6.16□□□□□ -1.42
CLCN3-208ENST00000512813 TMEM59Q9BXS4 323 aa6.16□□□□□ -1.42
CLCN3-208ENST00000512813 SCPEP1Q9HB40 452 aa6.16□□□□□ -1.42
CLCN3-208ENST00000512813 NRN1Q9NPD7 142 aa6.16□□□□□ -1.42
CLCN3-208ENST00000512813 RBMX2Q9Y388 322 aaKnown RBP6.16□□□□□ -1.42
CLCN3-208ENST00000512813 SAC3D1A6NKF1 404 aa6.15□□□□□ -1.42
CLCN3-208ENST00000512813 UPK2O00526 184 aa6.15□□□□□ -1.42
CLCN3-208ENST00000512813 EVI2AP22794 236 aa6.15□□□□□ -1.42
CLCN3-208ENST00000512813 DAPP51397 102 aa6.15□□□□□ -1.42
CLCN3-208ENST00000512813 RORCP51449 518 aa6.15□□□□□ -1.42
CLCN3-208ENST00000512813 B2MP61769 119 aa6.15□□□□□ -1.42
CLCN3-208ENST00000512813 UNC119Q13432 240 aa6.15□□□□□ -1.42
CLCN3-208ENST00000512813 LINC01620Q4KN68 170 aa6.15□□□□□ -1.42
CLCN3-208ENST00000512813 SPATA31B1PQ5VZV4 182 aa6.15□□□□□ -1.42
CLCN3-208ENST00000512813 PQLC1Q8N2U9 271 aa6.15□□□□□ -1.42
CLCN3-208ENST00000512813 OR1P1Q8NH06 330 aa6.15□□□□□ -1.42
CLCN3-208ENST00000512813 ANP32BQ92688 251 aaKnown RBP6.15□□□□□ -1.42
CLCN3-208ENST00000512813 LSM10Q969L4 123 aaKnown RBP6.15□□□□□ -1.42
CLCN3-208ENST00000512813 VSIG2Q96IQ7 327 aa6.15□□□□□ -1.42
CLCN3-208ENST00000512813 ABHD1Q96SE0 405 aa6.15□□□□□ -1.42
CLCN3-208ENST00000512813 HSD17B10Q99714 261 aaKnown RBP6.15□□□□□ -1.42
CLCN3-208ENST00000512813 AIFM2Q9BRQ8 373 aa6.15□□□□□ -1.42
CLCN3-208ENST00000512813 A0A0A6YYD4 124 aa6.14□□□□□ -1.43
CLCN3-208ENST00000512813 UBBP0CG47 229 aa6.14□□□□□ -1.43
CLCN3-208ENST00000512813 AZU1P20160 251 aa6.14□□□□□ -1.43
CLCN3-208ENST00000512813 GTF2A1P52655 376 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-208ENST00000512813 PAX9P55771 341 aa6.14□□□□□ -1.43
CLCN3-208ENST00000512813 MRPS15P82914 257 aaKnown RBP6.14□□□□□ -1.43
CLCN3-208ENST00000512813 C16orf54Q6UWD8 224 aa6.14□□□□□ -1.43
CLCN3-208ENST00000512813 LHFPL3Q86UP9 236 aa6.14□□□□□ -1.43
CLCN3-208ENST00000512813 H1FOOQ8IZA3 346 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-208ENST00000512813 C10orf126Q8N4M7 172 aa6.14□□□□□ -1.43
CLCN3-208ENST00000512813 LINC00612Q8N6U2 182 aa6.14□□□□□ -1.43
CLCN3-208ENST00000512813 TCTEX1D2Q8WW35 142 aa6.14□□□□□ -1.43
CLCN3-208ENST00000512813 MOB3AQ96BX8 217 aa6.14□□□□□ -1.43
CLCN3-208ENST00000512813 GINS4Q9BRT9 223 aa6.14□□□□□ -1.43
CLCN3-208ENST00000512813 DCSTAMPQ9H295 470 aa6.14□□□□□ -1.43
CLCN3-208ENST00000512813 TIMM8BQ9Y5J9 83 aaPredicted RBP6.14□□□□□ -1.43
CLCN3-208ENST00000512813 U3KQE9 123 aa6.14□□□□□ -1.43
CLCN3-208ENST00000512813 TRAV5A0A0B4J249 113 aa6.13□□□□□ -1.43
CLCN3-208ENST00000512813 TRBV5-5A0A0J9YX44 114 aa6.13□□□□□ -1.43
CLCN3-208ENST00000512813 ADAP1O75689 374 aa6.13□□□□□ -1.43
CLCN3-208ENST00000512813 MT-CO2P00403 227 aa6.13□□□□□ -1.43
CLCN3-208ENST00000512813 INSP01308 110 aa6.13□□□□□ -1.43
CLCN3-208ENST00000512813 IGLV2-14P01704 120 aa6.13□□□□□ -1.43
CLCN3-208ENST00000512813 IGHV3-48P01763 117 aa6.13□□□□□ -1.43
CLCN3-208ENST00000512813 DCKP27707 260 aa6.13□□□□□ -1.43
CLCN3-208ENST00000512813 CDKN1BP46527 198 aa6.13□□□□□ -1.43
CLCN3-208ENST00000512813 EIF4EBP1Q13541 118 aaPredicted RBP6.13□□□□□ -1.43
CLCN3-208ENST00000512813 POU2AF1Q16633 256 aa6.13□□□□□ -1.43
CLCN3-208ENST00000512813 FAM78BQ5VT40 261 aa6.13□□□□□ -1.43
CLCN3-208ENST00000512813 NKAIN3Q8N8D7 197 aa6.13□□□□□ -1.43
CLCN3-208ENST00000512813 OR1L8Q8NGR8 309 aa6.13□□□□□ -1.43
CLCN3-208ENST00000512813 CMSS1Q9BQ75 279 aaKnown RBP6.13□□□□□ -1.43
CLCN3-208ENST00000512813 DPH3P1Q9H4G8 78 aa6.13□□□□□ -1.43
CLCN3-208ENST00000512813 NDUFA4L2Q9NRX3 87 aa6.13□□□□□ -1.43
CLCN3-208ENST00000512813 CLEC2DQ9UHP7 191 aa6.13□□□□□ -1.43
CLCN3-208ENST00000512813 TEX50A0A1B0GTY4 177 aa6.12□□□□□ -1.43
CLCN3-208ENST00000512813 A8MTW9 85 aa6.12□□□□□ -1.43
CLCN3-208ENST00000512813 PANO1I0J062 215 aa6.12□□□□□ -1.43
CLCN3-208ENST00000512813 SLC22A5O76082 557 aa6.12□□□□□ -1.43
CLCN3-208ENST00000512813 PRDX6P30041 224 aa6.12□□□□□ -1.43
CLCN3-208ENST00000512813 NPBWR1P48145 328 aa6.12□□□□□ -1.43
CLCN3-208ENST00000512813 PPP5CP53041 499 aa6.12□□□□□ -1.43
CLCN3-208ENST00000512813 WFDC2Q14508 124 aa6.12□□□□□ -1.43
CLCN3-208ENST00000512813 Q499Y3 187 aa6.12□□□□□ -1.43
CLCN3-208ENST00000512813 XAF1Q6GPH4 301 aa6.12□□□□□ -1.43
CLCN3-208ENST00000512813 RPL22L1Q6P5R6 122 aaKnown RBP6.12□□□□□ -1.43
CLCN3-208ENST00000512813 AMTNQ6UX39 209 aa6.12□□□□□ -1.43
CLCN3-208ENST00000512813 DHFR2Q86XF0 187 aa6.12□□□□□ -1.43
CLCN3-208ENST00000512813 NRBF2Q96F24 287 aa6.12□□□□□ -1.43
CLCN3-208ENST00000512813 MISP3Q96FF7 219 aa6.12□□□□□ -1.43
CLCN3-208ENST00000512813 C16orf74Q96GX8 76 aa6.12□□□□□ -1.43
CLCN3-208ENST00000512813 NOP10Q9NPE3 64 aaKnown RBP6.12□□□□□ -1.43
CLCN3-208ENST00000512813 ZNF446Q9NWS9 450 aa6.12□□□□□ -1.43
CLCN3-208ENST00000512813 FOXI3A8MTJ6 420 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-208ENST00000512813 J3QRK9 145 aa6.11□□□□□ -1.43
CLCN3-208ENST00000512813 SOCS1O15524 211 aa6.11□□□□□ -1.43
CLCN3-208ENST00000512813 CRXO43186 299 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-208ENST00000512813 CDK1P06493 297 aa6.11□□□□□ -1.43
CLCN3-208ENST00000512813 FCER2P06734 321 aa6.11□□□□□ -1.43
CLCN3-208ENST00000512813 CRYGDP07320 174 aa6.11□□□□□ -1.43
CLCN3-208ENST00000512813 CD37P11049 281 aa6.11□□□□□ -1.43
CLCN3-208ENST00000512813 TAS2R31P59538 309 aa6.11□□□□□ -1.43
CLCN3-208ENST00000512813 CCDC58Q4VC31 144 aa6.11□□□□□ -1.43
CLCN3-208ENST00000512813 WFDC10BQ8IUB3 73 aa6.11□□□□□ -1.43
CLCN3-208ENST00000512813 ADGRG5Q8IZF4 528 aa6.11□□□□□ -1.43
CLCN3-208ENST00000512813 TMEM37Q8WXS4 190 aa6.11□□□□□ -1.43
CLCN3-208ENST00000512813 LGALS12Q96DT0 336 aa6.11□□□□□ -1.43
CLCN3-208ENST00000512813 HINT2Q9BX68 163 aa6.11□□□□□ -1.43
CLCN3-208ENST00000512813 TMEM140Q9NV12 185 aa6.11□□□□□ -1.43
CLCN3-208ENST00000512813 A0A0J9YX75 114 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms