RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 FCER2P06734 321 aa13.54□□□□□ -0.24
HMGCS1-206ENST00000511774 GNG2P59768 71 aa13.54□□□□□ -0.24
HMGCS1-206ENST00000511774 SOHLH1Q5JUK2 328 aa13.54□□□□□ -0.24
HMGCS1-206ENST00000511774 AADACL3Q5VUY0 350 aa13.54□□□□□ -0.24
HMGCS1-206ENST00000511774 BEST4Q8NFU0 473 aa13.54□□□□□ -0.24
HMGCS1-206ENST00000511774 MGLLQ99685 303 aa13.54□□□□□ -0.24
HMGCS1-206ENST00000511774 PUS1Q9Y606 427 aaKnown RBP eCLIP13.54□□□□□ -0.24
HMGCS1-206ENST00000511774 CD5P06127 495 aa13.53□□□□□ -0.24
HMGCS1-206ENST00000511774 EIF4EP06730 217 aaKnown RBP13.53□□□□□ -0.24
HMGCS1-206ENST00000511774 RAB3BP20337 219 aa13.53□□□□□ -0.24
HMGCS1-206ENST00000511774 G6PCP35575 357 aa13.53□□□□□ -0.24
HMGCS1-206ENST00000511774 STXBP6Q8NFX7 210 aa13.53□□□□□ -0.24
HMGCS1-206ENST00000511774 DCANP1Q8TF63 244 aa13.53□□□□□ -0.24
HMGCS1-206ENST00000511774 FCAMRQ8WWV6 532 aa13.53□□□□□ -0.24
HMGCS1-206ENST00000511774 TXN2Q99757 166 aa13.53□□□□□ -0.24
HMGCS1-206ENST00000511774 GINS3Q9BRX5 216 aa13.53□□□□□ -0.24
HMGCS1-206ENST00000511774 C8orf4Q9NR00 106 aa13.53□□□□□ -0.24
HMGCS1-206ENST00000511774 ERICH4A6NGS2 130 aa13.52□□□□□ -0.25
HMGCS1-206ENST00000511774 KRASP01116 189 aa13.52□□□□□ -0.25
HMGCS1-206ENST00000511774 GNRHRP30968 328 aa13.52□□□□□ -0.25
HMGCS1-206ENST00000511774 ARPC4P59998 168 aa13.52□□□□□ -0.25
HMGCS1-206ENST00000511774 TMEM17Q86X19 198 aa13.52□□□□□ -0.25
HMGCS1-206ENST00000511774 GRAMD2BQ96HH9 432 aa13.52□□□□□ -0.25
HMGCS1-206ENST00000511774 DUSP21Q9H596 190 aa13.52□□□□□ -0.25
HMGCS1-206ENST00000511774 GNG7O60262 68 aa13.51□□□□□ -0.25
HMGCS1-206ENST00000511774 LPAR6P43657 344 aa13.51□□□□□ -0.25
HMGCS1-206ENST00000511774 ERVK-16P61578 105 aa13.51□□□□□ -0.25
HMGCS1-206ENST00000511774 XCL2Q9UBD3 114 aa13.51□□□□□ -0.25
HMGCS1-206ENST00000511774 RLN1P04808 185 aa13.5□□□□□ -0.25
HMGCS1-206ENST00000511774 NPY1RP25929 384 aa13.5□□□□□ -0.25
HMGCS1-206ENST00000511774 RCN1Q15293 331 aa13.5□□□□□ -0.25
HMGCS1-206ENST00000511774 RNF212Q495C1 297 aa13.5□□□□□ -0.25
HMGCS1-206ENST00000511774 OGFRL1Q5TC84 451 aaPredicted RBP13.5□□□□□ -0.25
HMGCS1-206ENST00000511774 HOGA1Q86XE5 327 aa13.5□□□□□ -0.25
HMGCS1-206ENST00000511774 PINX1Q96BK5 328 aaKnown RBP13.5□□□□□ -0.25
HMGCS1-206ENST00000511774 RAB40CQ96S21 281 aa13.5□□□□□ -0.25
HMGCS1-206ENST00000511774 SCN3BQ9NY72 215 aa13.5□□□□□ -0.25
HMGCS1-206ENST00000511774 MYCBP2O75592 4640 aa13.5□□□□□ -0.25
HMGCS1-206ENST00000511774 FAT1Q14517 4588 aa13.49□□□□□ -0.25
HMGCS1-206ENST00000511774 F2RP25116 425 aa13.49□□□□□ -0.25
HMGCS1-206ENST00000511774 PPP5CP53041 499 aa13.49□□□□□ -0.25
HMGCS1-206ENST00000511774 ZNF600Q6ZNG1 722 aa13.49□□□□□ -0.25
HMGCS1-206ENST00000511774 TMEM56Q96MV1 263 aa13.49□□□□□ -0.25
HMGCS1-206ENST00000511774 CASQ2O14958 399 aaPredicted RBP13.48□□□□□ -0.25
HMGCS1-206ENST00000511774 RGS10O43665 173 aa13.48□□□□□ -0.25
HMGCS1-206ENST00000511774 PGLYRP1O75594 196 aaPredicted RBP13.48□□□□□ -0.25
HMGCS1-206ENST00000511774 SNAPC5O75971 98 aa13.48□□□□□ -0.25
HMGCS1-206ENST00000511774 MYL9P24844 172 aa13.48□□□□□ -0.25
HMGCS1-206ENST00000511774 P2RY1P47900 373 aa13.48□□□□□ -0.25
HMGCS1-206ENST00000511774 EMP1P54849 157 aa13.48□□□□□ -0.25
HMGCS1-206ENST00000511774 C22orf42Q6IC83 251 aa13.48□□□□□ -0.25
HMGCS1-206ENST00000511774 CADM3Q8N126 398 aa13.48□□□□□ -0.25
HMGCS1-206ENST00000511774 ZNF114Q8NC26 417 aa13.48□□□□□ -0.25
HMGCS1-206ENST00000511774 MRPL36Q9P0J6 103 aaKnown RBP13.48□□□□□ -0.25
HMGCS1-206ENST00000511774 PRNDQ9UKY0 176 aa13.48□□□□□ -0.25
HMGCS1-206ENST00000511774 LGALS14Q8TCE9 139 aa13.47□□□□□ -0.25
HMGCS1-206ENST00000511774 TRDV1A0A1B0GX56 115 aa13.46□□□□□ -0.25
HMGCS1-206ENST00000511774 TMEM50AO95807 157 aa13.46□□□□□ -0.25
HMGCS1-206ENST00000511774 SPART-AS1P0CW21 52 aa13.46□□□□□ -0.25
HMGCS1-206ENST00000511774 CRYBB3P26998 211 aa13.46□□□□□ -0.25
HMGCS1-206ENST00000511774 PSMG4Q5JS54 123 aa13.46□□□□□ -0.25
HMGCS1-206ENST00000511774 ZNF705AQ6ZN79 300 aaPredicted RBP13.46□□□□□ -0.25
HMGCS1-206ENST00000511774 MOB3AQ96BX8 217 aa13.46□□□□□ -0.25
HMGCS1-206ENST00000511774 FAM210BQ96KR6 192 aa13.46□□□□□ -0.25
HMGCS1-206ENST00000511774 CCDC90BQ9GZT6 254 aa13.46□□□□□ -0.25
HMGCS1-206ENST00000511774 ZNF705FA8MVS1 300 aaPredicted RBP13.45□□□□□ -0.26
HMGCS1-206ENST00000511774 ZNF705DP0CH99 300 aaPredicted RBP13.45□□□□□ -0.26
HMGCS1-206ENST00000511774 ZNF705BP0CI00 300 aaPredicted RBP13.45□□□□□ -0.26
HMGCS1-206ENST00000511774 NPPCP23582 126 aa13.45□□□□□ -0.26
HMGCS1-206ENST00000511774 SPINK9Q5DT21 86 aa13.45□□□□□ -0.26
HMGCS1-206ENST00000511774 ZNF367Q7RTV3 350 aa13.45□□□□□ -0.26
HMGCS1-206ENST00000511774 SLC25A38Q96DW6 304 aa13.45□□□□□ -0.26
HMGCS1-206ENST00000511774 TMEM231Q9H6L2 316 aa13.45□□□□□ -0.26
HMGCS1-206ENST00000511774 NDUFB11Q9NX14 153 aa13.45□□□□□ -0.26
HMGCS1-206ENST00000511774 RHBDL2Q9NX52 303 aa13.45□□□□□ -0.26
HMGCS1-206ENST00000511774 DKK2Q9UBU2 259 aa13.45□□□□□ -0.26
HMGCS1-206ENST00000511774 TPRKBQ9Y3C4 175 aa13.45□□□□□ -0.26
HMGCS1-206ENST00000511774 VPS13BQ7Z7G8 4022 aa13.44□□□□□ -0.26
HMGCS1-206ENST00000511774 TRAV18A0A075B6X5 111 aa13.44□□□□□ -0.26
HMGCS1-206ENST00000511774 NOTOA8MTQ0 251 aa13.44□□□□□ -0.26
HMGCS1-206ENST00000511774 HTN3P15516 51 aa13.44□□□□□ -0.26
HMGCS1-206ENST00000511774 FAM222AQ5U5X8 452 aa13.44□□□□□ -0.26
HMGCS1-206ENST00000511774 TMEM88Q6PEY1 159 aa13.44□□□□□ -0.26
HMGCS1-206ENST00000511774 PRSS48Q7RTY5 328 aa13.44□□□□□ -0.26
HMGCS1-206ENST00000511774 TPRA1Q86W33 373 aa13.44□□□□□ -0.26
HMGCS1-206ENST00000511774 OR5H6Q8NGV6 325 aa13.44□□□□□ -0.26
HMGCS1-206ENST00000511774 NEU1Q99519 415 aa13.44□□□□□ -0.26
HMGCS1-206ENST00000511774 DAPK2Q9UIK4 370 aa13.44□□□□□ -0.26
HMGCS1-206ENST00000511774 MEIS3P1A6NDR6 274 aa13.43□□□□□ -0.26
HMGCS1-206ENST00000511774 H3BMM0 161 aa13.43□□□□□ -0.26
HMGCS1-206ENST00000511774 IGKV1-39P01597 117 aa13.43□□□□□ -0.26
HMGCS1-206ENST00000511774 IGKV1D-39P04432 117 aa13.43□□□□□ -0.26
HMGCS1-206ENST00000511774 NPBWR1P48145 328 aa13.43□□□□□ -0.26
HMGCS1-206ENST00000511774 PRCDQ00LT1 54 aa13.43□□□□□ -0.26
HMGCS1-206ENST00000511774 DHRS2Q13268 280 aa13.43□□□□□ -0.26
HMGCS1-206ENST00000511774 OR5AP2Q8NGF4 316 aa13.43□□□□□ -0.26
HMGCS1-206ENST00000511774 FKBP11Q9NYL4 201 aa13.43□□□□□ -0.26
HMGCS1-206ENST00000511774 FLG2Q5D862 2391 aaPredicted RBP13.43□□□□□ -0.26
HMGCS1-206ENST00000511774 HELTA6NFD8 242 aa13.42□□□□□ -0.26
HMGCS1-206ENST00000511774 DEFB1P60022 68 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms