RNA–Protein interactions for RNA: ENST00000511303.5

SGCA-207, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-207ENST00000511303 TIMM9Q9Y5J7 89 aa9.43□□□□□ -0.9
SGCA-207ENST00000511303 SOX21Q9Y651 276 aaPredicted RBP9.43□□□□□ -0.9
SGCA-207ENST00000511303 UMAD1C9J7I0 102 aa9.42□□□□□ -0.9
SGCA-207ENST00000511303 BRI3O95415 125 aa9.42□□□□□ -0.9
SGCA-207ENST00000511303 IGHV4-59P01825 116 aa9.42□□□□□ -0.9
SGCA-207ENST00000511303 DEFA4P12838 97 aa9.42□□□□□ -0.9
SGCA-207ENST00000511303 AREGP15514 252 aa9.42□□□□□ -0.9
SGCA-207ENST00000511303 RBMS3Q6XE24 437 aaKnown RBP9.42□□□□□ -0.9
SGCA-207ENST00000511303 TMEM144Q7Z5S9 345 aa9.42□□□□□ -0.9
SGCA-207ENST00000511303 TMEM219Q86XT9 240 aa9.42□□□□□ -0.9
SGCA-207ENST00000511303 RNF141Q8WVD5 230 aa9.42□□□□□ -0.9
SGCA-207ENST00000511303 TAF15Q92804 592 aaKnown RBP eCLIP9.42□□□□□ -0.9
SGCA-207ENST00000511303 WNT10AQ9GZT5 417 aa9.42□□□□□ -0.9
SGCA-207ENST00000511303 THYN1Q9P016 225 aa9.42□□□□□ -0.9
SGCA-207ENST00000511303 CDC42EP3Q9UKI2 254 aa9.42□□□□□ -0.9
SGCA-207ENST00000511303 WDR83OSQ9Y284 106 aa9.42□□□□□ -0.9
SGCA-207ENST00000511303 C17orf112F2Z3M2 114 aa9.41□□□□□ -0.9
SGCA-207ENST00000511303 TRIM77I1YAP6 450 aa9.41□□□□□ -0.9
SGCA-207ENST00000511303 FBXO24O75426 580 aa9.41□□□□□ -0.9
SGCA-207ENST00000511303 CD99P14209 185 aa9.41□□□□□ -0.9
SGCA-207ENST00000511303 LY6EQ16553 131 aa9.41□□□□□ -0.9
SGCA-207ENST00000511303 TEPPQ6URK8 271 aa9.41□□□□□ -0.9
SGCA-207ENST00000511303 ZNF709Q8N972 641 aa9.41□□□□□ -0.9
SGCA-207ENST00000511303 FAM110DQ8TAY7 271 aaPredicted RBP9.41□□□□□ -0.9
SGCA-207ENST00000511303 C22orf15Q8WYQ4 148 aa9.41□□□□□ -0.9
SGCA-207ENST00000511303 SLC35E1Q96K37 410 aa9.41□□□□□ -0.9
SGCA-207ENST00000511303 ZNF48Q96MX3 618 aaPredicted RBP9.41□□□□□ -0.9
SGCA-207ENST00000511303 KCNIP2Q9NS61 270 aa9.41□□□□□ -0.9
SGCA-207ENST00000511303 FBXO7Q9Y3I1 522 aa9.41□□□□□ -0.9
SGCA-207ENST00000511303 LSM4Q9Y4Z0 139 aaKnown RBP9.41□□□□□ -0.9
SGCA-207ENST00000511303 MDFIC2A0A1B0GVS7 189 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 CLDN34H7C241 214 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 AP4M1O00189 453 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 MBP02144 154 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 ATP6V0CP27449 155 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 SULT1A2P50226 295 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 NDPQ00604 133 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 GAMTQ14353 236 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 NDUFA5Q16718 116 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 ARSJQ5FYB0 599 aaPredicted RBP9.4□□□□□ -0.9
SGCA-207ENST00000511303 CLLU1Q5K131 121 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 ASPHD1Q5U4P2 390 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 BTNL8Q6UX41 500 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 ALKAL2Q6UX46 152 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 TREML4Q6UXN2 200 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 DPPA3Q6W0C5 159 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 SLC35E3Q7Z769 313 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 HSD17B11Q8NBQ5 300 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 TMEM116Q8NCL8 245 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 LFNGQ8NES3 379 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 OR2G3Q8NGZ4 309 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 TMED6Q8WW62 240 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 SAT2Q96F10 170 aaPredicted RBP9.4□□□□□ -0.9
SGCA-207ENST00000511303 HSPB9Q9BQS6 159 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 PARP11Q9NR21 331 aa9.4□□□□□ -0.9
SGCA-207ENST00000511303 TLN2Q9Y4G6 2542 aa9.39□□□□□ -0.91
SGCA-207ENST00000511303 H3BUA1 57 aa9.39□□□□□ -0.91
SGCA-207ENST00000511303 ATP6V0E1O15342 81 aa9.39□□□□□ -0.91
SGCA-207ENST00000511303 HOXA3O43365 443 aaPredicted RBP9.39□□□□□ -0.91
SGCA-207ENST00000511303 LY6G6DO95868 133 aa9.39□□□□□ -0.91
SGCA-207ENST00000511303 FAM157CP0CG43 387 aa9.39□□□□□ -0.91
SGCA-207ENST00000511303 OPRK1P41145 380 aa9.39□□□□□ -0.91
SGCA-207ENST00000511303 RPL15P61313 204 aaKnown RBP9.39□□□□□ -0.91
SGCA-207ENST00000511303 BLOC1S1P78537 153 aa9.39□□□□□ -0.91
SGCA-207ENST00000511303 C19orf54Q5BKX5 351 aa9.39□□□□□ -0.91
SGCA-207ENST00000511303 UNQ5815/PRO19632Q6UWF5 114 aa9.39□□□□□ -0.91
SGCA-207ENST00000511303 SLC16A13Q7RTY0 426 aa9.39□□□□□ -0.91
SGCA-207ENST00000511303 SIGLECL1Q8N7X8 197 aa9.39□□□□□ -0.91
SGCA-207ENST00000511303 ATP6V0BQ99437 205 aa9.39□□□□□ -0.91
SGCA-207ENST00000511303 PRSS22Q9GZN4 317 aa9.39□□□□□ -0.91
SGCA-207ENST00000511303 NPFFR1Q9GZQ6 430 aa9.39□□□□□ -0.91
SGCA-207ENST00000511303 ACANP16112 2415 aa9.39□□□□□ -0.91
SGCA-207ENST00000511303 TET2Q6N021 2002 aaPredicted RBP9.38□□□□□ -0.91
SGCA-207ENST00000511303 OTOGQ6ZRI0 2925 aa9.38□□□□□ -0.91
SGCA-207ENST00000511303 IGLV11-55A0A075B6I3 123 aa9.38□□□□□ -0.91
SGCA-207ENST00000511303 TRAV41A0A0B4J266 112 aa9.38□□□□□ -0.91
SGCA-207ENST00000511303 UBE2L5PA0A1B0GUS4 154 aa9.38□□□□□ -0.91
SGCA-207ENST00000511303 TMEM89A2RUT3 159 aa9.38□□□□□ -0.91
SGCA-207ENST00000511303 I3L2K1 104 aa9.38□□□□□ -0.91
SGCA-207ENST00000511303 REG1AP05451 166 aa9.38□□□□□ -0.91
SGCA-207ENST00000511303 FGF7P21781 194 aa9.38□□□□□ -0.91
SGCA-207ENST00000511303 RPL29P47914 159 aaKnown RBP9.38□□□□□ -0.91
SGCA-207ENST00000511303 MFAP2P55001 183 aa9.38□□□□□ -0.91
SGCA-207ENST00000511303 SELENOTP62341 195 aa9.38□□□□□ -0.91
SGCA-207ENST00000511303 AKR1C1Q04828 323 aa9.38□□□□□ -0.91
SGCA-207ENST00000511303 THAP8Q8NA92 274 aa9.38□□□□□ -0.91
SGCA-207ENST00000511303 VN1R17PQ8TDU5 208 aa9.38□□□□□ -0.91
SGCA-207ENST00000511303 MISP3Q96FF7 219 aa9.38□□□□□ -0.91
SGCA-207ENST00000511303 FANCD2OSQ96PS1 177 aa9.38□□□□□ -0.91
SGCA-207ENST00000511303 TXN2Q99757 166 aa9.38□□□□□ -0.91
SGCA-207ENST00000511303 FAM103A1Q9BTL3 118 aaKnown RBP9.38□□□□□ -0.91
SGCA-207ENST00000511303 NPCDR1Q9BY65 106 aa9.38□□□□□ -0.91
SGCA-207ENST00000511303 FNDC4Q9H6D8 234 aaPredicted RBP9.38□□□□□ -0.91
SGCA-207ENST00000511303 CSMD1Q96PZ7 3565 aa9.38□□□□□ -0.91
SGCA-207ENST00000511303 TRAV30A0A087WSZ9 112 aa9.37□□□□□ -0.91
SGCA-207ENST00000511303 TRBV9A0A0B4J1U6 114 aa9.37□□□□□ -0.91
SGCA-207ENST00000511303 SMCO3A2RU48 225 aa9.37□□□□□ -0.91
SGCA-207ENST00000511303 MT-CO2P00403 227 aa9.37□□□□□ -0.91
SGCA-207ENST00000511303 FCGR2BP31994 310 aaPredicted RBP9.37□□□□□ -0.91
SGCA-207ENST00000511303 CAMLGP49069 296 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms