RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 ANXA2RQ3ZCQ2 193 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 TIMM50Q3ZCQ8 353 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 MRPL55Q7Z7F7 128 aaKnown RBP7.82□□□□□ -1.16
USP53-207ENST00000510852 PPP1R27Q86WC6 154 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 ZNF843Q8N446 348 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 YIPF7Q8N8F6 280 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 OR52N5Q8NH56 324 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 INTS1Q8N201 2190 aaKnown RBP7.81□□□□□ -1.16
USP53-207ENST00000510852 J3QLW9 94 aa7.81□□□□□ -1.16
USP53-207ENST00000510852 CT45A10P0DMU9 189 aa7.81□□□□□ -1.16
USP53-207ENST00000510852 LINC00694P0DN24 101 aa7.81□□□□□ -1.16
USP53-207ENST00000510852 ATP6V0CP27449 155 aa7.81□□□□□ -1.16
USP53-207ENST00000510852 SUMO2P61956 95 aaKnown RBP7.81□□□□□ -1.16
USP53-207ENST00000510852 TMEM229BQ8NBD8 167 aa7.81□□□□□ -1.16
USP53-207ENST00000510852 DLX4Q92988 240 aaPredicted RBP7.81□□□□□ -1.16
USP53-207ENST00000510852 C2orf48Q96LS8 159 aa7.81□□□□□ -1.16
USP53-207ENST00000510852 KMT2BQ9UMN6 2715 aaPredicted RBP7.81□□□□□ -1.16
USP53-207ENST00000510852 A0A1W2PP11 408 aa7.81□□□□□ -1.16
USP53-207ENST00000510852 hADV38S2A0JD32 116 aa7.81□□□□□ -1.16
USP53-207ENST00000510852 SMKR1H3BMG3 65 aa7.81□□□□□ -1.16
USP53-207ENST00000510852 C1QL1O75973 258 aa7.81□□□□□ -1.16
USP53-207ENST00000510852 ZNF32P17041 273 aa7.81□□□□□ -1.16
USP53-207ENST00000510852 CNTFRP26992 372 aa7.81□□□□□ -1.16
USP53-207ENST00000510852 PSMB9P28065 219 aa7.81□□□□□ -1.16
USP53-207ENST00000510852 OLFML2AQ68BL7 652 aa7.81□□□□□ -1.16
USP53-207ENST00000510852 KCTD18Q6PI47 426 aaPredicted RBP7.81□□□□□ -1.16
USP53-207ENST00000510852 C20orf204Q6ZNR8 217 aa7.81□□□□□ -1.16
USP53-207ENST00000510852 TMEM219Q86XT9 240 aa7.81□□□□□ -1.16
USP53-207ENST00000510852 CMTM4Q8IZR5 234 aa7.81□□□□□ -1.16
USP53-207ENST00000510852 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.81□□□□□ -1.16
USP53-207ENST00000510852 OR1L1Q8NH94 360 aa7.81□□□□□ -1.16
USP53-207ENST00000510852 SRSF12Q8WXF0 261 aaKnown RBP7.81□□□□□ -1.16
USP53-207ENST00000510852 SLAMF6Q96DU3 332 aa7.81□□□□□ -1.16
USP53-207ENST00000510852 PRADC1Q9BSG0 188 aa7.81□□□□□ -1.16
USP53-207ENST00000510852 PNRC2Q9NPJ4 139 aaKnown RBP7.81□□□□□ -1.16
USP53-207ENST00000510852 ZNF503-AS2A6NEH8 195 aa7.8□□□□□ -1.16
USP53-207ENST00000510852 OR2H2O95918 312 aa7.8□□□□□ -1.16
USP53-207ENST00000510852 MMP7P09237 267 aaPredicted RBP7.8□□□□□ -1.16
USP53-207ENST00000510852 AKAIN1P0CW23 69 aa7.8□□□□□ -1.16
USP53-207ENST00000510852 GP2P55259 537 aaKnown RBP7.8□□□□□ -1.16
USP53-207ENST00000510852 PCBD1P61457 104 aa7.8□□□□□ -1.16
USP53-207ENST00000510852 LAGE3Q14657 143 aa7.8□□□□□ -1.16
USP53-207ENST00000510852 ZNF726P1Q15940 193 aa7.8□□□□□ -1.16
USP53-207ENST00000510852 CLEC12BQ2HXU8 276 aa7.8□□□□□ -1.16
USP53-207ENST00000510852 ASPHD1Q5U4P2 390 aa7.8□□□□□ -1.16
USP53-207ENST00000510852 KIR2DL4Q99706 377 aa7.8□□□□□ -1.16
USP53-207ENST00000510852 MIEN1Q9BRT3 115 aa7.8□□□□□ -1.16
USP53-207ENST00000510852 PRSS22Q9GZN4 317 aa7.8□□□□□ -1.16
USP53-207ENST00000510852 COMMD9Q9P000 198 aa7.8□□□□□ -1.16
USP53-207ENST00000510852 PLA2G2DQ9UNK4 145 aa7.8□□□□□ -1.16
USP53-207ENST00000510852 CTRLP40313 264 aa7.8□□□□□ -1.16
USP53-207ENST00000510852 TMEM267Q0VDI3 215 aaPredicted RBP7.8□□□□□ -1.16
USP53-207ENST00000510852 STAC2Q6ZMT1 411 aa7.8□□□□□ -1.16
USP53-207ENST00000510852 GPHA2Q96T91 129 aa7.8□□□□□ -1.16
USP53-207ENST00000510852 TM2D1Q9BX74 207 aa7.8□□□□□ -1.16
USP53-207ENST00000510852 UBE2QL1A1L167 161 aa7.79□□□□□ -1.16
USP53-207ENST00000510852 FABP6P51161 128 aa7.79□□□□□ -1.16
USP53-207ENST00000510852 KHDC3LQ587J8 217 aa7.79□□□□□ -1.16
USP53-207ENST00000510852 ALKAL2Q6UX46 152 aa7.79□□□□□ -1.16
USP53-207ENST00000510852 NOX3Q9HBY0 568 aa7.79□□□□□ -1.16
USP53-207ENST00000510852 CACNA1CQ13936 2221 aa7.79□□□□□ -1.16
USP53-207ENST00000510852 MRPS12O15235 138 aaKnown RBP7.79□□□□□ -1.16
USP53-207ENST00000510852 TRIAP1O43715 76 aa7.79□□□□□ -1.16
USP53-207ENST00000510852 UBL3O95164 117 aa7.79□□□□□ -1.16
USP53-207ENST00000510852 UBE2NP61088 152 aaKnown RBP7.79□□□□□ -1.16
USP53-207ENST00000510852 RPL18AQ02543 176 aaKnown RBP7.79□□□□□ -1.16
USP53-207ENST00000510852 PRDX4Q13162 271 aa7.79□□□□□ -1.16
USP53-207ENST00000510852 LRRC10Q5BKY1 277 aa7.79□□□□□ -1.16
USP53-207ENST00000510852 SAMD12Q8N8I0 201 aa7.79□□□□□ -1.16
USP53-207ENST00000510852 ZFP41Q8N8Y5 198 aa7.79□□□□□ -1.16
USP53-207ENST00000510852 OR11H6Q8NGC7 330 aa7.79□□□□□ -1.16
USP53-207ENST00000510852 RNF166Q96A37 237 aaPredicted RBP7.79□□□□□ -1.16
USP53-207ENST00000510852 SLC25A31Q9H0C2 315 aa7.79□□□□□ -1.16
USP53-207ENST00000510852 MYO7BQ6PIF6 2116 aa7.79□□□□□ -1.16
USP53-207ENST00000510852 NCBP2LA6PVI3 153 aaKnown RBP7.78□□□□□ -1.16
USP53-207ENST00000510852 PSG9Q00887 426 aa7.78□□□□□ -1.16
USP53-207ENST00000510852 GSG1Q2KHT4 349 aa7.78□□□□□ -1.16
USP53-207ENST00000510852 MDP1Q86V88 176 aa7.78□□□□□ -1.16
USP53-207ENST00000510852 GBGT1Q8N5D6 347 aa7.78□□□□□ -1.16
USP53-207ENST00000510852 OR5AC2Q9NZP5 309 aa7.78□□□□□ -1.16
USP53-207ENST00000510852 NCOA6Q14686 2063 aaPredicted RBP7.78□□□□□ -1.16
USP53-207ENST00000510852 ESPL1Q14674 2120 aa7.78□□□□□ -1.16
USP53-207ENST00000510852 PCNX1Q96RV3 2341 aa7.78□□□□□ -1.16
USP53-207ENST00000510852 PTH2RP49190 550 aa7.78□□□□□ -1.16
USP53-207ENST00000510852 GRB2P62993 217 aaKnown RBP7.78□□□□□ -1.16
USP53-207ENST00000510852 SLC38A11Q08AI6 406 aa7.78□□□□□ -1.16
USP53-207ENST00000510852 OPCMLQ14982 345 aa7.78□□□□□ -1.16
USP53-207ENST00000510852 RSPO1Q2MKA7 263 aaPredicted RBP7.78□□□□□ -1.16
USP53-207ENST00000510852 IBA57Q5T440 356 aaKnown RBP7.78□□□□□ -1.16
USP53-207ENST00000510852 HIST3H2BBQ8N257 126 aa7.78□□□□□ -1.16
USP53-207ENST00000510852 CARD19Q96LW7 228 aa7.78□□□□□ -1.16
USP53-207ENST00000510852 DERL3Q96Q80 235 aa7.78□□□□□ -1.16
USP53-207ENST00000510852 EDA2RQ9HAV5 297 aa7.78□□□□□ -1.16
USP53-207ENST00000510852 SMCO4Q9NRQ5 59 aa7.78□□□□□ -1.16
USP53-207ENST00000510852 GPR137BO60478 399 aa7.77□□□□□ -1.17
USP53-207ENST00000510852 SRSF10O75494 262 aaKnown RBP7.77□□□□□ -1.17
USP53-207ENST00000510852 FGF6P10767 208 aa7.77□□□□□ -1.17
USP53-207ENST00000510852 NDUFA6P56556 154 aa7.77□□□□□ -1.17
USP53-207ENST00000510852 NANOS3P60323 173 aaKnown RBP7.77□□□□□ -1.17
USP53-207ENST00000510852 AWAT1Q58HT5 328 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 331.8 ms