RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 GGACTQ9BVM4 153 aa10.03□□□□□ -0.8
LYSMD3-204ENST00000509384 SMCO4Q9NRQ5 59 aa10.03□□□□□ -0.8
LYSMD3-204ENST00000509384 SOX21Q9Y651 276 aaPredicted RBP10.03□□□□□ -0.8
LYSMD3-204ENST00000509384 SMCO3A2RU48 225 aa10.02□□□□□ -0.8
LYSMD3-204ENST00000509384 PRSS46E5RG02 174 aa10.02□□□□□ -0.8
LYSMD3-204ENST00000509384 REG1AP05451 166 aa10.02□□□□□ -0.8
LYSMD3-204ENST00000509384 AREGP15514 252 aa10.02□□□□□ -0.8
LYSMD3-204ENST00000509384 DLK1P80370 383 aa10.02□□□□□ -0.8
LYSMD3-204ENST00000509384 AKR1C1Q04828 323 aa10.02□□□□□ -0.8
LYSMD3-204ENST00000509384 ZNF616Q08AN1 781 aa10.02□□□□□ -0.8
LYSMD3-204ENST00000509384 FXYD3Q14802 87 aa10.02□□□□□ -0.8
LYSMD3-204ENST00000509384 GUK1Q16774 197 aa10.02□□□□□ -0.8
LYSMD3-204ENST00000509384 VWC2Q2TAL6 325 aa10.02□□□□□ -0.8
LYSMD3-204ENST00000509384 SMUG1Q53HV7 270 aa10.02□□□□□ -0.8
LYSMD3-204ENST00000509384 NANPQ8TBE9 248 aa10.02□□□□□ -0.8
LYSMD3-204ENST00000509384 ABHD5Q8WTS1 349 aa10.02□□□□□ -0.8
LYSMD3-204ENST00000509384 P2RX4Q99571 388 aa10.02□□□□□ -0.8
LYSMD3-204ENST00000509384 SSX3Q99909 188 aa10.02□□□□□ -0.8
LYSMD3-204ENST00000509384 RASL11BQ9BPW5 248 aa10.02□□□□□ -0.8
LYSMD3-204ENST00000509384 SRSF8Q9BRL6 282 aaKnown RBP10.02□□□□□ -0.8
LYSMD3-204ENST00000509384 WDR61Q9GZS3 305 aaKnown RBP10.02□□□□□ -0.8
LYSMD3-204ENST00000509384 CSMD1Q96PZ7 3565 aa10.02□□□□□ -0.81
LYSMD3-204ENST00000509384 FSHBP01225 129 aa10.02□□□□□ -0.81
LYSMD3-204ENST00000509384 APELAP0DMC3 54 aa10.02□□□□□ -0.81
LYSMD3-204ENST00000509384 FGF7P21781 194 aa10.02□□□□□ -0.81
LYSMD3-204ENST00000509384 CX3CL1P78423 397 aa10.02□□□□□ -0.81
LYSMD3-204ENST00000509384 SRSF3P84103 164 aaKnown RBP10.02□□□□□ -0.81
LYSMD3-204ENST00000509384 ZNF562Q6V9R5 426 aa10.02□□□□□ -0.81
LYSMD3-204ENST00000509384 TMEM182Q6ZP80 229 aaPredicted RBP10.02□□□□□ -0.81
LYSMD3-204ENST00000509384 OR2G3Q8NGZ4 309 aa10.02□□□□□ -0.81
LYSMD3-204ENST00000509384 PIFOQ8TCI5 191 aa10.02□□□□□ -0.81
LYSMD3-204ENST00000509384 SSMEM1Q8WWF3 244 aa10.02□□□□□ -0.81
LYSMD3-204ENST00000509384 ARPC1AQ92747 370 aa10.02□□□□□ -0.81
LYSMD3-204ENST00000509384 TAF15Q92804 592 aaKnown RBP eCLIP10.02□□□□□ -0.81
LYSMD3-204ENST00000509384 TUBA4BQ9H853 241 aa10.02□□□□□ -0.81
LYSMD3-204ENST00000509384 PLA2G2EQ9NZK7 142 aa10.02□□□□□ -0.81
LYSMD3-204ENST00000509384 MOB4Q9Y3A3 225 aa10.02□□□□□ -0.81
LYSMD3-204ENST00000509384 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.01□□□□□ -0.81
LYSMD3-204ENST00000509384 H3BUX3 64 aa10.01□□□□□ -0.81
LYSMD3-204ENST00000509384 NUPL2O15504 423 aaKnown RBP10.01□□□□□ -0.81
LYSMD3-204ENST00000509384 TSPAN9O75954 239 aa10.01□□□□□ -0.81
LYSMD3-204ENST00000509384 HLA-DRB1P01911 266 aa10.01□□□□□ -0.81
LYSMD3-204ENST00000509384 TMEM219Q86XT9 240 aa10.01□□□□□ -0.81
LYSMD3-204ENST00000509384 C15orf54Q8N8G6 183 aa10.01□□□□□ -0.81
LYSMD3-204ENST00000509384 ZNF114Q8NC26 417 aa10.01□□□□□ -0.81
LYSMD3-204ENST00000509384 RNASEH2CQ8TDP1 164 aaKnown RBP10.01□□□□□ -0.81
LYSMD3-204ENST00000509384 RBM14Q96PK6 669 aaKnown RBP10.01□□□□□ -0.81
LYSMD3-204ENST00000509384 SLC25A33Q9BSK2 321 aa10.01□□□□□ -0.81
LYSMD3-204ENST00000509384 RSG1Q9BU20 258 aa10.01□□□□□ -0.81
LYSMD3-204ENST00000509384 TMEM231Q9H6L2 316 aa10.01□□□□□ -0.81
LYSMD3-204ENST00000509384 SVEP1Q4LDE5 3571 aa10□□□□□ -0.81
LYSMD3-204ENST00000509384 PDZD2O15018 2839 aa10□□□□□ -0.81
LYSMD3-204ENST00000509384 FNDC10F2Z333 226 aa10□□□□□ -0.81
LYSMD3-204ENST00000509384 FOLR2P14207 255 aa10□□□□□ -0.81
LYSMD3-204ENST00000509384 NDPQ00604 133 aa10□□□□□ -0.81
LYSMD3-204ENST00000509384 RHEBQ15382 184 aa10□□□□□ -0.81
LYSMD3-204ENST00000509384 OR1P1Q8NH06 330 aa10□□□□□ -0.81
LYSMD3-204ENST00000509384 PSMG3Q9BT73 122 aaPredicted RBP10□□□□□ -0.81
LYSMD3-204ENST00000509384 FAM103A1Q9BTL3 118 aaKnown RBP10□□□□□ -0.81
LYSMD3-204ENST00000509384 SLC35B3Q9H1N7 401 aa10□□□□□ -0.81
LYSMD3-204ENST00000509384 MLXQ9UH92 298 aa10□□□□□ -0.81
LYSMD3-204ENST00000509384 WDR83OSQ9Y284 106 aa10□□□□□ -0.81
LYSMD3-204ENST00000509384 RFNGQ9Y644 331 aa10□□□□□ -0.81
LYSMD3-204ENST00000509384 TET2Q6N021 2002 aaPredicted RBP10□□□□□ -0.81
LYSMD3-204ENST00000509384 CR1P17927 2039 aa9.99□□□□□ -0.81
LYSMD3-204ENST00000509384 IGHV7-81A0A0B4J1V7 117 aa9.99□□□□□ -0.81
LYSMD3-204ENST00000509384 TRAV1-1A0A0B4J248 108 aa9.99□□□□□ -0.81
LYSMD3-204ENST00000509384 MDFIC2A0A1B0GVS7 189 aa9.99□□□□□ -0.81
LYSMD3-204ENST00000509384 NPBWR1P48145 328 aa9.99□□□□□ -0.81
LYSMD3-204ENST00000509384 CD69Q07108 199 aa9.99□□□□□ -0.81
LYSMD3-204ENST00000509384 DEFB112Q30KQ8 113 aa9.99□□□□□ -0.81
LYSMD3-204ENST00000509384 ARSJQ5FYB0 599 aaPredicted RBP9.99□□□□□ -0.81
LYSMD3-204ENST00000509384 AKR1C8PQ5T2L2 129 aa9.99□□□□□ -0.81
LYSMD3-204ENST00000509384 C9orf139Q6ZV77 190 aa9.99□□□□□ -0.81
LYSMD3-204ENST00000509384 C5orf56Q8N8D9 126 aa9.99□□□□□ -0.81
LYSMD3-204ENST00000509384 ZNF709Q8N972 641 aa9.99□□□□□ -0.81
LYSMD3-204ENST00000509384 FAM213BQ8TBF2 198 aa9.99□□□□□ -0.81
LYSMD3-204ENST00000509384 C22orf15Q8WYQ4 148 aa9.99□□□□□ -0.81
LYSMD3-204ENST00000509384 NPCDR1Q9BY65 106 aa9.99□□□□□ -0.81
LYSMD3-204ENST00000509384 EIF5A2Q9GZV4 153 aaKnown RBP9.99□□□□□ -0.81
LYSMD3-204ENST00000509384 PITPNC1Q9UKF7 332 aa9.99□□□□□ -0.81
LYSMD3-204ENST00000509384 FBXO7Q9Y3I1 522 aa9.99□□□□□ -0.81
LYSMD3-204ENST00000509384 F11RQ9Y624 299 aaKnown RBP9.99□□□□□ -0.81
LYSMD3-204ENST00000509384 CCDC168Q8NDH2 2452 aa9.99□□□□□ -0.81
LYSMD3-204ENST00000509384 TNCP24821 2201 aa9.98□□□□□ -0.81
LYSMD3-204ENST00000509384 PRRC2AP48634 2157 aaKnown RBP9.98□□□□□ -0.81
LYSMD3-204ENST00000509384 A6NDX4 124 aa9.98□□□□□ -0.81
LYSMD3-204ENST00000509384 C17orf112F2Z3M2 114 aa9.98□□□□□ -0.81
LYSMD3-204ENST00000509384 AGPAT2O15120 278 aa9.98□□□□□ -0.81
LYSMD3-204ENST00000509384 MPDU1O75352 247 aa9.98□□□□□ -0.81
LYSMD3-204ENST00000509384 MDKP21741 143 aaPredicted RBP9.98□□□□□ -0.81
LYSMD3-204ENST00000509384 OPRK1P41145 380 aa9.98□□□□□ -0.81
LYSMD3-204ENST00000509384 PPT1P50897 306 aa9.98□□□□□ -0.81
LYSMD3-204ENST00000509384 LY6EQ16553 131 aa9.98□□□□□ -0.81
LYSMD3-204ENST00000509384 RNF212Q495C1 297 aa9.98□□□□□ -0.81
LYSMD3-204ENST00000509384 TREML4Q6UXN2 200 aa9.98□□□□□ -0.81
LYSMD3-204ENST00000509384 C19orf35Q6ZS72 473 aa9.98□□□□□ -0.81
LYSMD3-204ENST00000509384 SLC16A13Q7RTY0 426 aa9.98□□□□□ -0.81
LYSMD3-204ENST00000509384 BCL6BQ8N143 479 aaPredicted RBP9.98□□□□□ -0.81
LYSMD3-204ENST00000509384 TEX29Q8N6K0 151 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms