RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 HTR1AP08908 422 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 CTXN2P0C2S0 81 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 SMIM10L2AP0DMW4 78 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 SMIM10L2BP0DMW5 78 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 G6PCP35575 357 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 RPS20P60866 119 aaKnown RBP1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 REEP5Q00765 189 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 ZNF345Q14585 488 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 RIC1Q4ADV7 1423 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 OOSP2Q86WS3 158 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 GDPD1Q8N9F7 314 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 PFN4Q8NHR9 129 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 H1FXQ92522 213 aaKnown RBP1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 GBF1Q92538 1859 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 CHMP6Q96FZ7 201 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 BTF3L4Q96K17 158 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 PRAP1Q96NZ9 151 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 MRPL32Q9BYC8 188 aaKnown RBP1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 SLC39A9Q9NUM3 307 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 AMMECR1Q9Y4X0 333 aaPredicted RBP1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 LHFPL6Q9Y693 200 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 NEO1Q92859 1461 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 ITGB4P16144 1822 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 KIF24Q5T7B8 1368 aa1.35□□□□□ -2.19
COL4A3BP-205ENST00000508692 CUL9Q8IWT3 2517 aa1.35□□□□□ -2.19
COL4A3BP-205ENST00000508692 FBN1P35555 2871 aaKnown RBP1.35□□□□□ -2.19
COL4A3BP-205ENST00000508692 A0A0D9SG52 128 aa1.35□□□□□ -2.19
COL4A3BP-205ENST00000508692 hADV38S2A0JD32 116 aa1.35□□□□□ -2.19
COL4A3BP-205ENST00000508692 PDE6DO43924 150 aa1.35□□□□□ -2.19
COL4A3BP-205ENST00000508692 TCL1BO95988 128 aa1.35□□□□□ -2.19
COL4A3BP-205ENST00000508692 CLPSP04118 112 aa1.35□□□□□ -2.19
COL4A3BP-205ENST00000508692 PRB1P04280 392 aa1.35□□□□□ -2.19
COL4A3BP-205ENST00000508692 COX6A1P12074 109 aa1.35□□□□□ -2.19
COL4A3BP-205ENST00000508692 ERVS71-1P61550 626 aa1.35□□□□□ -2.19
COL4A3BP-205ENST00000508692 FP248Q71RG6 208 aaPredicted RBP1.35□□□□□ -2.19
COL4A3BP-205ENST00000508692 WFDC11Q8NEX6 87 aa1.35□□□□□ -2.19
COL4A3BP-205ENST00000508692 OR4D11Q8NGI4 311 aa1.35□□□□□ -2.19
COL4A3BP-205ENST00000508692 TERB2Q8NHR7 220 aa1.35□□□□□ -2.19
COL4A3BP-205ENST00000508692 Q96M85 177 aa1.35□□□□□ -2.19
COL4A3BP-205ENST00000508692 MIXL1Q9H2W2 232 aa1.35□□□□□ -2.19
COL4A3BP-205ENST00000508692 MED9Q9NWA0 146 aa1.35□□□□□ -2.19
COL4A3BP-205ENST00000508692 TP73-AS1Q9UF72 201 aa1.35□□□□□ -2.19
COL4A3BP-205ENST00000508692 FBXO5Q9UKT4 447 aa1.35□□□□□ -2.19
COL4A3BP-205ENST00000508692 COL4A1P02462 1669 aa1.35□□□□□ -2.19
COL4A3BP-205ENST00000508692 TONSLQ96HA7 1378 aa1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 ROBO3Q96MS0 1386 aa1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 FAM236DA0A1B0GTK5 79 aa1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 J3QRK9 145 aa1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 MRPS14O60783 128 aaKnown RBP1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 IFNA6P05013 189 aa1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 FAM236CP0DP71 79 aa1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 PPIBP23284 216 aaKnown RBP1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 S100A4P26447 101 aaKnown RBP1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 YPEL3P61236 119 aaPredicted RBP1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 MRPS15P82914 257 aaKnown RBP1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 C12orf74Q32Q52 190 aa1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 DPPA3Q6W0C5 159 aa1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 TRAPPC6BQ86SZ2 158 aa1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 BPIFA4PQ86YQ2 179 aa1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 LINC00471Q8N535 108 aa1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 C9orf163Q8N9P6 203 aa1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 DNAJC9Q8WXX5 260 aa1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 C2orf50Q96LR7 162 aa1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 NMNAT1Q9HAN9 279 aaPredicted RBP1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 IDI2-AS1Q9NZ38 188 aa1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 ERGIC3Q9Y282 383 aa1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 PRELID3BQ9Y3B1 194 aa1.34□□□□□ -2.19
COL4A3BP-205ENST00000508692 TTC21AQ8NDW8 1320 aa1.34□□□□□ -2.2
COL4A3BP-205ENST00000508692 FCGBPQ9Y6R7 5405 aaPredicted RBP1.34□□□□□ -2.2
COL4A3BP-205ENST00000508692 ZFYVE9O95405 1425 aa1.33□□□□□ -2.2
COL4A3BP-205ENST00000508692 KIAA2026Q5HYC2 2103 aa1.33□□□□□ -2.2
COL4A3BP-205ENST00000508692 PTPRSQ13332 1948 aa1.33□□□□□ -2.2
COL4A3BP-205ENST00000508692 OR5F1O95221 314 aa1.33□□□□□ -2.2
COL4A3BP-205ENST00000508692 SERPINE1P05121 402 aa1.33□□□□□ -2.2
COL4A3BP-205ENST00000508692 C8GP07360 202 aa1.33□□□□□ -2.2
COL4A3BP-205ENST00000508692 MRPS25P82663 173 aaKnown RBP1.33□□□□□ -2.2
COL4A3BP-205ENST00000508692 KISS1Q15726 138 aa1.33□□□□□ -2.2
COL4A3BP-205ENST00000508692 LIN52Q52LA3 116 aa1.33□□□□□ -2.2
COL4A3BP-205ENST00000508692 KHDC3LQ587J8 217 aa1.33□□□□□ -2.2
COL4A3BP-205ENST00000508692 SPANXN5Q5MJ07 72 aa1.33□□□□□ -2.2
COL4A3BP-205ENST00000508692 LCN15Q6UWW0 184 aa1.33□□□□□ -2.2
COL4A3BP-205ENST00000508692 ZNF826PQ6ZT77 177 aa1.33□□□□□ -2.2
COL4A3BP-205ENST00000508692 CLVS1Q8IUQ0 354 aaPredicted RBP1.33□□□□□ -2.2
COL4A3BP-205ENST00000508692 HIST3H2BBQ8N257 126 aa1.33□□□□□ -2.2
COL4A3BP-205ENST00000508692 ZNF439Q8NDP4 499 aa1.33□□□□□ -2.2
COL4A3BP-205ENST00000508692 OR51A2Q8NGJ7 313 aa1.33□□□□□ -2.2
COL4A3BP-205ENST00000508692 KIFC1Q9BW19 673 aa1.33□□□□□ -2.2
COL4A3BP-205ENST00000508692 CYSLTR1Q9Y271 337 aa1.33□□□□□ -2.2
COL4A3BP-205ENST00000508692 ARL2BPQ9Y2Y0 163 aa1.33□□□□□ -2.2
COL4A3BP-205ENST00000508692 MALRD1Q5VYJ5 2156 aa1.32□□□□□ -2.2
COL4A3BP-205ENST00000508692 SORL1Q92673 2214 aa1.32□□□□□ -2.2
COL4A3BP-205ENST00000508692 hCG_1818297A0A087WSY0 165 aa1.32□□□□□ -2.2
COL4A3BP-205ENST00000508692 A8MT66 165 aa1.32□□□□□ -2.2
COL4A3BP-205ENST00000508692 BUB1B-PAK6H3BSN5 160 aa1.32□□□□□ -2.2
COL4A3BP-205ENST00000508692 OR2B3O76000 313 aa1.32□□□□□ -2.2
COL4A3BP-205ENST00000508692 OR7C1O76099 320 aaPredicted RBP1.32□□□□□ -2.2
COL4A3BP-205ENST00000508692 ZNF682O95780 498 aa1.32□□□□□ -2.2
COL4A3BP-205ENST00000508692 SHBGP04278 402 aa1.32□□□□□ -2.2
COL4A3BP-205ENST00000508692 UBBP0CG47 229 aa1.32□□□□□ -2.2
COL4A3BP-205ENST00000508692 ARL14EPLP0DKL9 152 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms