RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 HIST2H2BEQ16778 126 aa2.98□□□□□ -1.93
SMARCA5-202ENST00000508573 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.98□□□□□ -1.93
SMARCA5-202ENST00000508573 TIFABQ6ZNK6 161 aa2.98□□□□□ -1.93
SMARCA5-202ENST00000508573 CEND1Q8N111 149 aa2.98□□□□□ -1.93
SMARCA5-202ENST00000508573 C4orf33Q8N1A6 199 aa2.98□□□□□ -1.93
SMARCA5-202ENST00000508573 HIST1H2BHQ93079 126 aa2.98□□□□□ -1.93
SMARCA5-202ENST00000508573 LITAFQ99732 161 aa2.98□□□□□ -1.93
SMARCA5-202ENST00000508573 HIST1H2BNQ99877 126 aa2.98□□□□□ -1.93
SMARCA5-202ENST00000508573 HIST1H2BMQ99879 126 aa2.98□□□□□ -1.93
SMARCA5-202ENST00000508573 SHANK2-AS3Q9BTD1 123 aa2.98□□□□□ -1.93
SMARCA5-202ENST00000508573 PLA2G12AQ9BZM1 189 aa2.98□□□□□ -1.93
SMARCA5-202ENST00000508573 TMEM133Q9H2Q1 129 aa2.98□□□□□ -1.93
SMARCA5-202ENST00000508573 TUBA4BQ9H853 241 aa2.98□□□□□ -1.93
SMARCA5-202ENST00000508573 CKLFQ9UBR5 152 aa2.98□□□□□ -1.93
SMARCA5-202ENST00000508573 CELA1Q9UNI1 258 aa2.98□□□□□ -1.93
SMARCA5-202ENST00000508573 MOB4Q9Y3A3 225 aa2.98□□□□□ -1.93
SMARCA5-202ENST00000508573 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.98□□□□□ -1.93
SMARCA5-202ENST00000508573 NUP210Q8TEM1 1887 aaPredicted RBP2.98□□□□□ -1.93
SMARCA5-202ENST00000508573 TP53BP1Q12888 1972 aaPredicted RBP2.98□□□□□ -1.93
SMARCA5-202ENST00000508573 COL5A2P05997 1499 aaPredicted RBP2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 MYOM3Q5VTT5 1437 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 TNS2Q63HR2 1409 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 IGHV3-66A0A0C4DH42 116 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 FAM236AA0A1B0GUQ0 79 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 FAM236BA0A1B0GV22 79 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 A0A1B0GVX0 72 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 C1orf196B1AJZ1 125 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 TMEM256-PLSCR3K7ERE1 68 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 NAPSAO96009 420 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 IGLV1-44P01699 117 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 IGLV3-25P01717 112 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 MAS1P04201 325 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 HIST1H1BP16401 226 aaKnown RBP2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 ELK1P19419 428 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 CASP1P29466 404 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 SDC2P34741 201 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 GNG4P50150 75 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 NDUFA6P56556 154 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 LGALS9BQ3B8N2 356 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 LUZP6Q538Z0 58 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 AADACL3Q5VUY0 350 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 LGALS9CQ6DKI2 356 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 SSX8Q7RTT4 187 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 CAMK2N1Q7Z7J9 78 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 SLC25A42Q86VD7 318 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 MSRB3Q8IXL7 192 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 IFT20Q8IY31 132 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 C9orf62Q8N4C0 152 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 C11orf42Q8N5U0 333 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 OR4S1Q8NGB4 309 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 OR5H6Q8NGV6 325 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 LINC01006Q8NI28 216 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 BRK1Q8WUW1 75 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 PP6455Q8WZ26 134 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 C1orf147Q96MC9 270 aaPredicted RBP2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 SDF2Q99470 211 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 HDHD3Q9BSH5 251 aaPredicted RBP2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 DERL1Q9BUN8 251 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 FUT9Q9Y231 359 aa2.97□□□□□ -1.93
SMARCA5-202ENST00000508573 CECR2Q9BXF3 1484 aa2.96□□□□□ -1.93
SMARCA5-202ENST00000508573 RALGAPA2Q2PPJ7 1873 aa2.96□□□□□ -1.93
SMARCA5-202ENST00000508573 DSPPQ9NZW4 1301 aa2.96□□□□□ -1.93
SMARCA5-202ENST00000508573 MYH11P35749 1972 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 TRAPPC8Q9Y2L5 1435 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 IGHV3OR15-7A0A075B7D8 119 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 IGHV5-51A0A0C4DH38 117 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 IGHV1-58A0A0C4DH39 117 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 IGHV7-4-1A0A0J9YVY3 117 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 IRGMA1A4Y4 181 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 IFITM5A6NNB3 132 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 SCO1O75880 301 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 NCR2O95944 276 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 CXCL1P09341 107 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 ZNF688P0C7X2 276 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 TLX1NBP0CAT3 122 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 AKAIN1P0CW23 69 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 CGB3P0DN86 165 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 CGB7P0DN87 165 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 CCL20P78556 96 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 DIAPH2-AS1Q14236 149 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 TRAPPC6BQ86SZ2 158 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 TEX29Q8N6K0 151 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 ZNF525Q8N782 197 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 DAND5Q8N907 189 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 FER1L6-AS1Q8NA97 138 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 KLHL30-AS1Q8NEE0 82 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 OR8A1Q8NGG7 326 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 OR5A2Q8NGI9 324 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 TMEM158Q8WZ71 300 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 OR4C12Q96R67 309 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 MARCOQ9UEW3 520 aaPredicted RBP2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 SOX21Q9Y651 276 aaPredicted RBP2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 ZFYVE16Q7Z3T8 1539 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 GPATCH8Q9UKJ3 1502 aaKnown RBP2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 PZPP20742 1482 aa2.96□□□□□ -1.94
SMARCA5-202ENST00000508573 CHD4Q14839 1912 aa2.95□□□□□ -1.94
SMARCA5-202ENST00000508573 IGKV1-9A0A0C4DH69 117 aa2.95□□□□□ -1.94
SMARCA5-202ENST00000508573 IGHV5-10-1A0A0J9YXX1 117 aa2.95□□□□□ -1.94
SMARCA5-202ENST00000508573 A0A1W2PPR1 153 aa2.95□□□□□ -1.94
SMARCA5-202ENST00000508573 A8MWP6 167 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms