RNA–Protein interactions for RNA: ENST00000508504.1

TRIM60-203, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM60, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-203ENST00000508504 AKAP14Q86UN6 197 aa13.58□□□□□ -0.24
TRIM60-203ENST00000508504 MRPL41Q8IXM3 137 aaKnown RBP13.58□□□□□ -0.24
TRIM60-203ENST00000508504 WFDC12Q8WWY7 111 aa13.58□□□□□ -0.24
TRIM60-203ENST00000508504 ASB13Q8WXK3 278 aa13.58□□□□□ -0.24
TRIM60-203ENST00000508504 PINX1Q96BK5 328 aaKnown RBP13.58□□□□□ -0.24
TRIM60-203ENST00000508504 FNDC4Q9H6D8 234 aaPredicted RBP13.58□□□□□ -0.24
TRIM60-203ENST00000508504 IGSF23A1L1A6 192 aa13.57□□□□□ -0.24
TRIM60-203ENST00000508504 TAS2R30P59541 319 aa13.57□□□□□ -0.24
TRIM60-203ENST00000508504 ARL16Q0P5N6 197 aa13.57□□□□□ -0.24
TRIM60-203ENST00000508504 FOXE3Q13461 319 aa13.57□□□□□ -0.24
TRIM60-203ENST00000508504 TMEM14EPQ6UXP3 125 aa13.57□□□□□ -0.24
TRIM60-203ENST00000508504 C18orf65Q6ZTR6 163 aa13.57□□□□□ -0.24
TRIM60-203ENST00000508504 HAPLN4Q86UW8 402 aa13.57□□□□□ -0.24
TRIM60-203ENST00000508504 OR11H4Q8NGC9 324 aa13.57□□□□□ -0.24
TRIM60-203ENST00000508504 LYRM2Q9NU23 88 aaPredicted RBP13.57□□□□□ -0.24
TRIM60-203ENST00000508504 FBXL7Q9UJT9 491 aa13.57□□□□□ -0.24
TRIM60-203ENST00000508504 STRAPQ9Y3F4 350 aaKnown RBP13.57□□□□□ -0.24
TRIM60-203ENST00000508504 MFSD2BA6NFX1 497 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 PMS2P5A8MQ11 134 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 E5RGE8 158 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 K7EIM0 57 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 TSC22D2O75157 780 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 IGHV3-23P01764 117 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 RLN2P04090 185 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 LYL1P12980 280 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 KLK9Q2XQG4 91 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 C15orf32Q32M92 178 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 RNF152Q8N8N0 203 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 ZFP57Q9NU63 452 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 MRPL36Q9P0J6 103 aaKnown RBP13.56□□□□□ -0.24
TRIM60-203ENST00000508504 KLK9Q9UKQ9 250 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 A0A1B0GUS0 222 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 PRSS46E5RG02 174 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 I3L2K1 104 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 CST7O76096 145 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 IGHV3-11P01762 117 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 IFNA4P05014 189 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 ELANEP08246 267 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 PVALBP20472 110 aaPredicted RBP13.56□□□□□ -0.24
TRIM60-203ENST00000508504 SUB1P53999 127 aaKnown RBP eCLIP13.56□□□□□ -0.24
TRIM60-203ENST00000508504 RPL23AP62750 156 aaKnown RBP13.56□□□□□ -0.24
TRIM60-203ENST00000508504 OR8G2PQ6IF36 304 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 TMEM65Q6PI78 240 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 TMEM252Q8N6L7 170 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 THAP6Q8TBB0 222 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 MYOZ3Q8TDC0 251 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 TMEM158Q8WZ71 300 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 DCUN1D4Q92564 292 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 BSCL2Q96G97 398 aaPredicted RBP13.56□□□□□ -0.24
TRIM60-203ENST00000508504 OR5B12Q96R08 314 aa13.56□□□□□ -0.24
TRIM60-203ENST00000508504 CITED2Q99967 270 aaPredicted RBP13.56□□□□□ -0.24
TRIM60-203ENST00000508504 FXYD6-FXYD2A0A087WZ82 144 aa13.55□□□□□ -0.24
TRIM60-203ENST00000508504 H3BUA1 57 aa13.55□□□□□ -0.24
TRIM60-203ENST00000508504 BRI3O95415 125 aa13.55□□□□□ -0.24
TRIM60-203ENST00000508504 MT-CO2P00403 227 aa13.55□□□□□ -0.24
TRIM60-203ENST00000508504 PET100P0DJ07 73 aa13.55□□□□□ -0.24
TRIM60-203ENST00000508504 ETV3LQ6ZN32 361 aa13.55□□□□□ -0.24
TRIM60-203ENST00000508504 NECAP1Q8NC96 275 aa13.55□□□□□ -0.24
TRIM60-203ENST00000508504 OR4X2Q8NGF9 303 aa13.55□□□□□ -0.24
TRIM60-203ENST00000508504 MDFIQ99750 246 aa13.55□□□□□ -0.24
TRIM60-203ENST00000508504 SLA2Q9H6Q3 261 aa13.55□□□□□ -0.24
TRIM60-203ENST00000508504 ANK2Q01484 3957 aa13.55□□□□□ -0.24
TRIM60-203ENST00000508504 OR8U8P0C7N1 319 aa13.54□□□□□ -0.24
TRIM60-203ENST00000508504 OPRK1P41145 380 aa13.54□□□□□ -0.24
TRIM60-203ENST00000508504 NHLH2Q02577 135 aa13.54□□□□□ -0.24
TRIM60-203ENST00000508504 FGL1Q08830 312 aa13.54□□□□□ -0.24
TRIM60-203ENST00000508504 TCTE3Q8IZS6 198 aa13.54□□□□□ -0.24
TRIM60-203ENST00000508504 TMEM217Q8N7C4 229 aa13.54□□□□□ -0.24
TRIM60-203ENST00000508504 SCARB1Q8WTV0 552 aa13.54□□□□□ -0.24
TRIM60-203ENST00000508504 GNB4Q9HAV0 340 aa13.54□□□□□ -0.24
TRIM60-203ENST00000508504 P2RY1P47900 373 aa13.53□□□□□ -0.24
TRIM60-203ENST00000508504 KHDC1LQ5JSQ8 128 aa13.53□□□□□ -0.24
TRIM60-203ENST00000508504 COMMD1Q8N668 190 aa13.53□□□□□ -0.24
TRIM60-203ENST00000508504 ZNF491Q8N8L2 437 aa13.53□□□□□ -0.24
TRIM60-203ENST00000508504 WNK1Q9H4A3 2382 aa13.53□□□□□ -0.24
TRIM60-203ENST00000508504 A0A1W2PRX2 142 aa13.53□□□□□ -0.24
TRIM60-203ENST00000508504 F8W735 103 aaPredicted RBP13.53□□□□□ -0.24
TRIM60-203ENST00000508504 SLC25A4P12235 298 aa13.53□□□□□ -0.24
TRIM60-203ENST00000508504 RAB11AP62491 216 aa13.53□□□□□ -0.24
TRIM60-203ENST00000508504 RPP30P78346 268 aaKnown RBP13.53□□□□□ -0.24
TRIM60-203ENST00000508504 OR1L6Q8NGR2 347 aa13.53□□□□□ -0.24
TRIM60-203ENST00000508504 RNASEH2CQ8TDP1 164 aaKnown RBP13.53□□□□□ -0.24
TRIM60-203ENST00000508504 CCDC140Q96MF4 163 aa13.53□□□□□ -0.24
TRIM60-203ENST00000508504 TCRBV4S1A1TA0A5B7 111 aa13.52□□□□□ -0.25
TRIM60-203ENST00000508504 FAM223BA6NKX1 122 aa13.52□□□□□ -0.25
TRIM60-203ENST00000508504 LY86O95711 162 aa13.52□□□□□ -0.25
TRIM60-203ENST00000508504 TRBV12-3P01733 135 aa13.52□□□□□ -0.25
TRIM60-203ENST00000508504 HIST1H1BP16401 226 aaKnown RBP13.52□□□□□ -0.25
TRIM60-203ENST00000508504 EWSR1Q01844 656 aaKnown RBP eCLIP13.52□□□□□ -0.25
TRIM60-203ENST00000508504 ACOT7LQ6ZUV0 252 aa13.52□□□□□ -0.25
TRIM60-203ENST00000508504 ZNF546Q86UE3 836 aa13.52□□□□□ -0.25
TRIM60-203ENST00000508504 FAM223AQ8IWN6 122 aa13.52□□□□□ -0.25
TRIM60-203ENST00000508504 RNF222A6NCQ9 220 aa13.51□□□□□ -0.25
TRIM60-203ENST00000508504 ADARB2-AS1A8MUL3 147 aa13.51□□□□□ -0.25
TRIM60-203ENST00000508504 RPL12P30050 165 aaKnown RBP13.51□□□□□ -0.25
TRIM60-203ENST00000508504 SULT1A1P50225 295 aa13.51□□□□□ -0.25
TRIM60-203ENST00000508504 ATP5IP56385 69 aaPredicted RBP13.51□□□□□ -0.25
TRIM60-203ENST00000508504 ATP5G2Q06055 141 aa13.51□□□□□ -0.25
TRIM60-203ENST00000508504 CD69Q07108 199 aa13.51□□□□□ -0.25
TRIM60-203ENST00000508504 ZC4H2Q9NQZ6 224 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms