RNA–Protein interactions for RNA: ENST00000508454.1

USO1-202, Transcript of USO1 vesicle transport factor, humanhuman

TSL 3

Gene USO1, Length 365 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USO1-202ENST00000508454 RSPO3Q9BXY4 272 aaPredicted RBP2.56□□□□□ -2
USO1-202ENST00000508454 LRTM1Q9HBL6 345 aa2.56□□□□□ -2
USO1-202ENST00000508454 TXNL4BQ9NX01 149 aaKnown RBP2.56□□□□□ -2
USO1-202ENST00000508454 GINS2Q9Y248 185 aa2.56□□□□□ -2
USO1-202ENST00000508454 HSPE1-MOB4S4R3N1 261 aa2.56□□□□□ -2
USO1-202ENST00000508454 NUP160Q12769 1436 aa2.56□□□□□ -2
USO1-202ENST00000508454 SHANK1Q9Y566 2161 aa2.56□□□□□ -2
USO1-202ENST00000508454 A0A0D9SEW6 157 aa2.55□□□□□ -2
USO1-202ENST00000508454 ZNF860A6NHJ4 632 aa2.55□□□□□ -2
USO1-202ENST00000508454 IFNA10P01566 189 aa2.55□□□□□ -2
USO1-202ENST00000508454 IFNA7P01567 189 aa2.55□□□□□ -2
USO1-202ENST00000508454 IGHV3-7P01780 117 aa2.55□□□□□ -2
USO1-202ENST00000508454 C1QAP02745 245 aa2.55□□□□□ -2
USO1-202ENST00000508454 IGKV1-16P04430 117 aa2.55□□□□□ -2
USO1-202ENST00000508454 DEFA4P12838 97 aa2.55□□□□□ -2
USO1-202ENST00000508454 RPS4Y1P22090 263 aaKnown RBP2.55□□□□□ -2
USO1-202ENST00000508454 S100GP29377 79 aa2.55□□□□□ -2
USO1-202ENST00000508454 MYH11P35749 1972 aa2.55□□□□□ -2
USO1-202ENST00000508454 RPL28P46779 137 aaKnown RBP2.55□□□□□ -2
USO1-202ENST00000508454 SARNPP82979 210 aaKnown RBP2.55□□□□□ -2
USO1-202ENST00000508454 BAMBIQ13145 260 aa2.55□□□□□ -2
USO1-202ENST00000508454 BPIFA4PQ86YQ2 179 aa2.55□□□□□ -2
USO1-202ENST00000508454 Q8NDZ9 215 aa2.55□□□□□ -2
USO1-202ENST00000508454 DYDC1Q8WWB3 177 aa2.55□□□□□ -2
USO1-202ENST00000508454 PLEKHB2Q96CS7 222 aa2.55□□□□□ -2
USO1-202ENST00000508454 MIEN1Q9BRT3 115 aa2.55□□□□□ -2
USO1-202ENST00000508454 SETD5Q9C0A6 1442 aa2.55□□□□□ -2
USO1-202ENST00000508454 PBOV1Q9GZY1 135 aa2.55□□□□□ -2
USO1-202ENST00000508454 TAS2R7Q9NYW3 318 aa2.55□□□□□ -2
USO1-202ENST00000508454 NAT8Q9UHE5 227 aa2.55□□□□□ -2
USO1-202ENST00000508454 HEATR5AQ86XA9 2040 aa2.54□□□□□ -2
USO1-202ENST00000508454 SCN9AQ15858 1988 aa2.54□□□□□ -2
USO1-202ENST00000508454 PTPRSQ13332 1948 aa2.54□□□□□ -2
USO1-202ENST00000508454 FHAD1B1AJZ9 1412 aa2.54□□□□□ -2
USO1-202ENST00000508454 YTHDC2Q9H6S0 1430 aaKnown RBP2.54□□□□□ -2
USO1-202ENST00000508454 TRAV38-1A0A0B4J264 116 aa2.54□□□□□ -2
USO1-202ENST00000508454 A0A0J9YW62 118 aa2.54□□□□□ -2
USO1-202ENST00000508454 A0A1W2PNM2 257 aa2.54□□□□□ -2
USO1-202ENST00000508454 RIIAD1A6NNX1 92 aa2.54□□□□□ -2
USO1-202ENST00000508454 J3QRK9 145 aa2.54□□□□□ -2
USO1-202ENST00000508454 AIPO00170 330 aa2.54□□□□□ -2
USO1-202ENST00000508454 TP53I11O14683 189 aa2.54□□□□□ -2
USO1-202ENST00000508454 ARPC5O15511 151 aa2.54□□□□□ -2
USO1-202ENST00000508454 GNRH2O43555 120 aa2.54□□□□□ -2
USO1-202ENST00000508454 BANF1O75531 89 aa2.54□□□□□ -2
USO1-202ENST00000508454 PSMB8P28062 276 aa2.54□□□□□ -2
USO1-202ENST00000508454 CASP1P29466 404 aa2.54□□□□□ -2
USO1-202ENST00000508454 AKR1C1Q04828 323 aa2.54□□□□□ -2
USO1-202ENST00000508454 LINC01554Q52M75 96 aa2.54□□□□□ -2
USO1-202ENST00000508454 IGFL3Q6UXB1 125 aa2.54□□□□□ -2
USO1-202ENST00000508454 TMEM35BQ8NCS4 154 aa2.54□□□□□ -2
USO1-202ENST00000508454 WFDC5Q8TCV5 224 aa2.54□□□□□ -2
USO1-202ENST00000508454 SLAMF6Q96DU3 332 aa2.54□□□□□ -2
USO1-202ENST00000508454 ADAT3Q96EY9 351 aaPredicted RBP2.54□□□□□ -2
USO1-202ENST00000508454 EFCAB11Q9BUY7 163 aa2.54□□□□□ -2
USO1-202ENST00000508454 ZNF471Q9BX82 626 aaPredicted RBP2.54□□□□□ -2
USO1-202ENST00000508454 TMEM133Q9H2Q1 129 aa2.54□□□□□ -2
USO1-202ENST00000508454 RNF122Q9H9V4 155 aa2.54□□□□□ -2
USO1-202ENST00000508454 PCTPQ9UKL6 214 aa2.54□□□□□ -2
USO1-202ENST00000508454 CCDC88AQ3V6T2 1871 aa2.54□□□□□ -2
USO1-202ENST00000508454 SPATA31E1Q6ZUB1 1445 aa2.53□□□□□ -2
USO1-202ENST00000508454 C1orf196B1AJZ1 125 aa2.53□□□□□ -2
USO1-202ENST00000508454 M0R378 163 aa2.53□□□□□ -2
USO1-202ENST00000508454 INSL3P51460 131 aa2.53□□□□□ -2
USO1-202ENST00000508454 IGFBP7Q16270 282 aa2.53□□□□□ -2
USO1-202ENST00000508454 RRN3P1Q2M238 152 aa2.53□□□□□ -2
USO1-202ENST00000508454 DEFB134Q4QY38 66 aa2.53□□□□□ -2
USO1-202ENST00000508454 KTN1-AS1Q86SY8 53 aa2.53□□□□□ -2
USO1-202ENST00000508454 CLVS1Q8IUQ0 354 aaPredicted RBP2.53□□□□□ -2
USO1-202ENST00000508454 ZNF561Q8N587 486 aa2.53□□□□□ -2
USO1-202ENST00000508454 OR51T1Q8NGJ9 327 aa2.53□□□□□ -2
USO1-202ENST00000508454 DEDD2Q8WXF8 326 aa2.53□□□□□ -2
USO1-202ENST00000508454 HIGD2AQ9BW72 106 aa2.53□□□□□ -2
USO1-202ENST00000508454 IMUPQ9GZP8 106 aa2.53□□□□□ -2
USO1-202ENST00000508454 MED11Q9P086 117 aa2.53□□□□□ -2
USO1-202ENST00000508454 IGKV1-9A0A0C4DH69 117 aa2.52□□□□□ -2.01
USO1-202ENST00000508454 A0A0J9YX75 114 aa2.52□□□□□ -2.01
USO1-202ENST00000508454 DUXBA0A1W2PPF3 345 aa2.52□□□□□ -2.01
USO1-202ENST00000508454 TMEM235A6NFC5 223 aa2.52□□□□□ -2.01
USO1-202ENST00000508454 SYNGR2O43760 224 aa2.52□□□□□ -2.01
USO1-202ENST00000508454 CDS2O95674 445 aa2.52□□□□□ -2.01
USO1-202ENST00000508454 BPGMP07738 259 aa2.52□□□□□ -2.01
USO1-202ENST00000508454 RAB4BP61018 213 aa2.52□□□□□ -2.01
USO1-202ENST00000508454 AP1S1P61966 158 aa2.52□□□□□ -2.01
USO1-202ENST00000508454 HIST1H4AP62805 103 aaKnown RBP2.52□□□□□ -2.01
USO1-202ENST00000508454 SUPT4H1P63272 117 aaKnown RBP2.52□□□□□ -2.01
USO1-202ENST00000508454 NUP35Q8NFH5 326 aa2.52□□□□□ -2.01
USO1-202ENST00000508454 DNAJC9Q8WXX5 260 aa2.52□□□□□ -2.01
USO1-202ENST00000508454 MALSU1Q96EH3 234 aa2.52□□□□□ -2.01
USO1-202ENST00000508454 ZC2HC1AQ96GY0 325 aa2.52□□□□□ -2.01
USO1-202ENST00000508454 TUBA4BQ9H853 241 aa2.52□□□□□ -2.01
USO1-202ENST00000508454 SLC39A9Q9NUM3 307 aa2.52□□□□□ -2.01
USO1-202ENST00000508454 MRPL16Q9NX20 251 aaKnown RBP2.52□□□□□ -2.01
USO1-202ENST00000508454 FMN1Q68DA7 1419 aa2.51□□□□□ -2.01
USO1-202ENST00000508454 WDR90Q96KV7 1748 aa2.51□□□□□ -2.01
USO1-202ENST00000508454 TRGV5A0A0B4J1U4 118 aa2.51□□□□□ -2.01
USO1-202ENST00000508454 TAX1BP3O14907 124 aa2.51□□□□□ -2.01
USO1-202ENST00000508454 CST8O60676 142 aa2.51□□□□□ -2.01
USO1-202ENST00000508454 IGKV3-11P04433 115 aa2.51□□□□□ -2.01
USO1-202ENST00000508454 PYDC2Q56P42 97 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms