RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 SUPT4H1P63272 117 aaKnown RBP1.71□□□□□ -2.14
USP53-204ENST00000507906 RPL18Q07020 188 aaKnown RBP1.71□□□□□ -2.14
USP53-204ENST00000507906 OR52R1Q8NGF1 315 aa1.71□□□□□ -2.14
USP53-204ENST00000507906 H1FXQ92522 213 aaKnown RBP1.71□□□□□ -2.14
USP53-204ENST00000507906 TXNDC17Q9BRA2 123 aa1.71□□□□□ -2.14
USP53-204ENST00000507906 ARL2BPQ9Y2Y0 163 aa1.71□□□□□ -2.14
USP53-204ENST00000507906 NAIPQ13075 1403 aa1.71□□□□□ -2.14
USP53-204ENST00000507906 MYH8P13535 1937 aa1.71□□□□□ -2.14
USP53-204ENST00000507906 HIVEP2P31629 2446 aa1.71□□□□□ -2.14
USP53-204ENST00000507906 ARHGAP32A7KAX9 2087 aa1.71□□□□□ -2.14
USP53-204ENST00000507906 SAMD9Q5K651 1589 aa1.71□□□□□ -2.14
USP53-204ENST00000507906 DISP1Q96F81 1524 aa1.71□□□□□ -2.14
USP53-204ENST00000507906 KDM5DQ9BY66 1539 aa1.71□□□□□ -2.14
USP53-204ENST00000507906 CROCC2H7BZ55 1655 aa1.71□□□□□ -2.14
USP53-204ENST00000507906 SHPRHQ149N8 1683 aa1.71□□□□□ -2.14
USP53-204ENST00000507906 SCN9AQ15858 1988 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 POLA1P09884 1462 aaPredicted RBP1.7□□□□□ -2.14
USP53-204ENST00000507906 GAPVD1Q14C86 1478 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 SCAF11Q99590 1463 aaKnown RBP1.7□□□□□ -2.14
USP53-204ENST00000507906 MAST2Q6P0Q8 1798 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 A0A0D9SEW6 157 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 HFM1A2PYH4 1435 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 ARRDC5A6NEK1 342 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 H3BRN7 92 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 H7C2G1 150 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 J3QQQ9 107 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 SYNMO15061 1565 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 OR2J2O76002 312 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 OR7C1O76099 320 aaPredicted RBP1.7□□□□□ -2.14
USP53-204ENST00000507906 CEP152O94986 1710 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 GTF2A1P52655 376 aaPredicted RBP1.7□□□□□ -2.14
USP53-204ENST00000507906 RPL26P61254 145 aaKnown RBP1.7□□□□□ -2.14
USP53-204ENST00000507906 MRPS25P82663 173 aaKnown RBP1.7□□□□□ -2.14
USP53-204ENST00000507906 AKR1C1Q04828 323 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 LIN52Q52LA3 116 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 PABPC1L2AQ5JQF8 200 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 HACD4Q5VWC8 232 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 SUPT6HQ7KZ85 1726 aaKnown RBP1.7□□□□□ -2.14
USP53-204ENST00000507906 LRRC28Q86X40 367 aaPredicted RBP1.7□□□□□ -2.14
USP53-204ENST00000507906 MRPS24Q96EL2 167 aaKnown RBP1.7□□□□□ -2.14
USP53-204ENST00000507906 CMSS1Q9BQ75 279 aaKnown RBP1.7□□□□□ -2.14
USP53-204ENST00000507906 NDUFB11Q9NX14 153 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 RPL26L1Q9UNX3 145 aaKnown RBP1.7□□□□□ -2.14
USP53-204ENST00000507906 AMMECR1Q9Y4X0 333 aaPredicted RBP1.7□□□□□ -2.14
USP53-204ENST00000507906 LAMC3Q9Y6N6 1575 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 PBRM1Q86U86 1689 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 PRDM15P57071 1507 aaPredicted RBP1.7□□□□□ -2.14
USP53-204ENST00000507906 TONSLQ96HA7 1378 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 MYH1P12882 1939 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 MYH6P13533 1939 aa1.7□□□□□ -2.14
USP53-204ENST00000507906 FYCO1Q9BQS8 1478 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 TTC21AQ8NDW8 1320 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 IGHV3-64A0A075B6Q5 118 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 FABP5P3A8MUU1 101 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 C1QAP02745 245 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 CLPSP04118 112 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 SHBGP04278 402 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 SMIM10L2AP0DMW4 78 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 SMIM10L2BP0DMW5 78 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 PSMB8P28062 276 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 G6PCP35575 357 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 ZNF80P51504 273 aaPredicted RBP1.69□□□□□ -2.14
USP53-204ENST00000507906 KRTAP12-3P60328 96 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 ARF6P62330 175 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 SLC38A11Q08AI6 406 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 MOGQ16653 247 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 AKIRIN2Q53H80 203 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 IBA57Q5T440 356 aaKnown RBP1.69□□□□□ -2.14
USP53-204ENST00000507906 Q6ZTI0 123 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 RPP25LQ8N5L8 163 aaKnown RBP1.69□□□□□ -2.14
USP53-204ENST00000507906 GDPD1Q8N9F7 314 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 PXT1Q8NFP0 134 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 OR13C4Q8NGS5 318 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 CT55Q8WUE5 264 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 TOMM6Q96B49 74 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 COMMD5Q9GZQ3 224 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 ENY2Q9NPA8 101 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 FAM32AQ9Y421 112 aaKnown RBP1.69□□□□□ -2.14
USP53-204ENST00000507906 TIMM9Q9Y5J7 89 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 MYH2Q9UKX2 1941 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 EHBP1L1Q8N3D4 1523 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 ARHGEF12Q9NZN5 1544 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 NESP48681 1621 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 RNF17Q9BXT8 1623 aaKnown RBP1.69□□□□□ -2.14
USP53-204ENST00000507906 GRIN2AQ12879 1464 aa1.69□□□□□ -2.14
USP53-204ENST00000507906 ARHGEF5Q12774 1597 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 IQGAP1P46940 1657 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 N4BP2Q86UW6 1770 aaPredicted RBP1.68□□□□□ -2.14
USP53-204ENST00000507906 CASZ1Q86V15 1759 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 EFCAB5A4FU69 1503 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 ARHGEF11O15085 1522 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 LY6LH3BQJ8 138 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 PIRO00625 290 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 CREBL2O60519 120 aaPredicted RBP1.68□□□□□ -2.14
USP53-204ENST00000507906 IGKV1-16P04430 117 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 MSMBP08118 114 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 SMIM17P0DL12 118 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 RPS4Y1P22090 263 aaKnown RBP1.68□□□□□ -2.14
USP53-204ENST00000507906 KRTAP12-1P59990 96 aa1.68□□□□□ -2.14
USP53-204ENST00000507906 CDC42P60953 191 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms