RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 CRYGCP07315 174 aa13.73□□□□□ -0.21
RNF4-209ENST00000507784 RNASE1P07998 156 aaKnown RBP13.73□□□□□ -0.21
RNF4-209ENST00000507784 TMEM95Q3KNT9 176 aa13.73□□□□□ -0.21
RNF4-209ENST00000507784 ZNF114Q8NC26 417 aa13.73□□□□□ -0.21
RNF4-209ENST00000507784 OR1L6Q8NGR2 347 aa13.73□□□□□ -0.21
RNF4-209ENST00000507784 OR1P1Q8NH06 330 aa13.73□□□□□ -0.21
RNF4-209ENST00000507784 SMCO3A2RU48 225 aa13.72□□□□□ -0.21
RNF4-209ENST00000507784 IGF1P05019 195 aa13.72□□□□□ -0.21
RNF4-209ENST00000507784 MFAP2P55001 183 aa13.72□□□□□ -0.21
RNF4-209ENST00000507784 ATP6V1FQ16864 119 aa13.72□□□□□ -0.21
RNF4-209ENST00000507784 WFDC1Q9HC57 220 aa13.72□□□□□ -0.21
RNF4-209ENST00000507784 IGHV3-21A0A0B4J1V1 117 aa13.71□□□□□ -0.21
RNF4-209ENST00000507784 TAAR5O14804 337 aa13.71□□□□□ -0.21
RNF4-209ENST00000507784 OPRK1P41145 380 aa13.71□□□□□ -0.21
RNF4-209ENST00000507784 CRIP2P52943 208 aaPredicted RBP13.71□□□□□ -0.21
RNF4-209ENST00000507784 MLANAQ16655 118 aa13.71□□□□□ -0.21
RNF4-209ENST00000507784 STPG2Q8N412 459 aa13.71□□□□□ -0.21
RNF4-209ENST00000507784 RNASEH2CQ8TDP1 164 aaKnown RBP13.71□□□□□ -0.21
RNF4-209ENST00000507784 TAF15Q92804 592 aaKnown RBP eCLIP13.71□□□□□ -0.21
RNF4-209ENST00000507784 MS4A10Q96PG2 267 aa13.71□□□□□ -0.21
RNF4-209ENST00000507784 ZNF471Q9BX82 626 aaPredicted RBP13.71□□□□□ -0.21
RNF4-209ENST00000507784 ANK3Q12955 4377 aaKnown RBP13.71□□□□□ -0.21
RNF4-209ENST00000507784 BORCS7-ASMTA0A0B4J1R7 106 aa13.7□□□□□ -0.22
RNF4-209ENST00000507784 CORTO00230 105 aa13.7□□□□□ -0.22
RNF4-209ENST00000507784 OR2J3O76001 311 aa13.7□□□□□ -0.22
RNF4-209ENST00000507784 DFFBO76075 338 aa13.7□□□□□ -0.22
RNF4-209ENST00000507784 IFNA5P01569 189 aa13.7□□□□□ -0.22
RNF4-209ENST00000507784 CD69Q07108 199 aa13.7□□□□□ -0.22
RNF4-209ENST00000507784 ATP5SQ99766 215 aa13.7□□□□□ -0.22
RNF4-209ENST00000507784 SVEP1Q4LDE5 3571 aa13.69□□□□□ -0.22
RNF4-209ENST00000507784 RPS10-NUDT3A0A1W2PQS6 291 aa13.69□□□□□ -0.22
RNF4-209ENST00000507784 MT-CO2P00403 227 aa13.69□□□□□ -0.22
RNF4-209ENST00000507784 IGHV3-48P01763 117 aa13.69□□□□□ -0.22
RNF4-209ENST00000507784 HIST1H1BP16401 226 aaKnown RBP13.69□□□□□ -0.22
RNF4-209ENST00000507784 DLK1P80370 383 aa13.69□□□□□ -0.22
RNF4-209ENST00000507784 RPL7L1Q6DKI1 246 aaKnown RBP13.69□□□□□ -0.22
RNF4-209ENST00000507784 ETFRF1Q6IPR1 90 aa13.69□□□□□ -0.22
RNF4-209ENST00000507784 Q6ZSV7 163 aa13.69□□□□□ -0.22
RNF4-209ENST00000507784 OR2T6Q8NHC8 308 aa13.69□□□□□ -0.22
RNF4-209ENST00000507784 SLC35E1Q96K37 410 aa13.69□□□□□ -0.22
RNF4-209ENST00000507784 TMEM147Q9BVK8 224 aa13.69□□□□□ -0.22
RNF4-209ENST00000507784 CYTL1Q9NRR1 136 aa13.69□□□□□ -0.22
RNF4-209ENST00000507784 UQCC1Q9NVA1 299 aa13.69□□□□□ -0.22
RNF4-209ENST00000507784 THYN1Q9P016 225 aa13.69□□□□□ -0.22
RNF4-209ENST00000507784 FBXL7Q9UJT9 491 aa13.69□□□□□ -0.22
RNF4-209ENST00000507784 DMRT1Q9Y5R6 373 aa13.69□□□□□ -0.22
RNF4-209ENST00000507784 MXRA5Q9NR99 2828 aa13.69□□□□□ -0.22
RNF4-209ENST00000507784 IGLV11-55A0A075B6I3 123 aa13.68□□□□□ -0.22
RNF4-209ENST00000507784 UBE2L5PA0A1B0GUS4 154 aa13.68□□□□□ -0.22
RNF4-209ENST00000507784 PRSS46E5RG02 174 aa13.68□□□□□ -0.22
RNF4-209ENST00000507784 PF4V1P10720 104 aa13.68□□□□□ -0.22
RNF4-209ENST00000507784 GPX4P36969 197 aaPredicted RBP13.68□□□□□ -0.22
RNF4-209ENST00000507784 SRSF2Q01130 221 aaKnown RBP13.68□□□□□ -0.22
RNF4-209ENST00000507784 DEFA5Q01523 94 aa13.68□□□□□ -0.22
RNF4-209ENST00000507784 EXOSC2Q13868 293 aaKnown RBP13.68□□□□□ -0.22
RNF4-209ENST00000507784 C19orf54Q5BKX5 351 aa13.68□□□□□ -0.22
RNF4-209ENST00000507784 PVRIGQ6DKI7 326 aa13.68□□□□□ -0.22
RNF4-209ENST00000507784 SLC16A13Q7RTY0 426 aa13.68□□□□□ -0.22
RNF4-209ENST00000507784 SCGB1C1Q8TD33 95 aa13.68□□□□□ -0.22
RNF4-209ENST00000507784 FANCD2OSQ96PS1 177 aa13.68□□□□□ -0.22
RNF4-209ENST00000507784 GGACTQ9BVM4 153 aa13.68□□□□□ -0.22
RNF4-209ENST00000507784 GON7Q9BXV9 100 aa13.68□□□□□ -0.22
RNF4-209ENST00000507784 SOX15O60248 233 aa13.67□□□□□ -0.22
RNF4-209ENST00000507784 TSPAN9O75954 239 aa13.67□□□□□ -0.22
RNF4-209ENST00000507784 NDUFB8O95169 186 aa13.67□□□□□ -0.22
RNF4-209ENST00000507784 RPL15P61313 204 aaKnown RBP13.67□□□□□ -0.22
RNF4-209ENST00000507784 SLC35B1P78383 322 aa13.67□□□□□ -0.22
RNF4-209ENST00000507784 AKR1C1Q04828 323 aa13.67□□□□□ -0.22
RNF4-209ENST00000507784 ZNF266Q14584 549 aa13.67□□□□□ -0.22
RNF4-209ENST00000507784 ACSM6Q6P461 480 aa13.67□□□□□ -0.22
RNF4-209ENST00000507784 CENPVQ7Z7K6 275 aaPredicted RBP13.67□□□□□ -0.22
RNF4-209ENST00000507784 ZNF329Q86UD4 541 aa13.67□□□□□ -0.22
RNF4-209ENST00000507784 SLC51BQ86UW2 128 aa13.67□□□□□ -0.22
RNF4-209ENST00000507784 Q8N2B8 174 aa13.67□□□□□ -0.22
RNF4-209ENST00000507784 ACY3Q96HD9 319 aa13.67□□□□□ -0.22
RNF4-209ENST00000507784 FNDC4Q9H6D8 234 aaPredicted RBP13.67□□□□□ -0.22
RNF4-209ENST00000507784 S4R3C0 116 aa13.67□□□□□ -0.22
RNF4-209ENST00000507784 PSMB11A5LHX3 300 aa13.66□□□□□ -0.22
RNF4-209ENST00000507784 JTBO76095 146 aa13.66□□□□□ -0.22
RNF4-209ENST00000507784 TRGV3P03979 118 aa13.66□□□□□ -0.22
RNF4-209ENST00000507784 PPIFP30405 207 aaKnown RBP13.66□□□□□ -0.22
RNF4-209ENST00000507784 EIF5AP63241 154 aaKnown RBP13.66□□□□□ -0.22
RNF4-209ENST00000507784 RHOGP84095 191 aa13.66□□□□□ -0.22
RNF4-209ENST00000507784 CACNG8Q8WXS5 425 aa13.66□□□□□ -0.22
RNF4-209ENST00000507784 NPVFQ9HCQ7 196 aa13.66□□□□□ -0.22
RNF4-209ENST00000507784 ZNF580Q9UK33 172 aa13.66□□□□□ -0.22
RNF4-209ENST00000507784 F8P00451 2351 aa13.66□□□□□ -0.22
RNF4-209ENST00000507784 I3L2K1 104 aa13.65□□□□□ -0.22
RNF4-209ENST00000507784 TPT1P13693 172 aaKnown RBP13.65□□□□□ -0.22
RNF4-209ENST00000507784 FGF7P21781 194 aa13.65□□□□□ -0.22
RNF4-209ENST00000507784 TPPP2P59282 170 aa13.65□□□□□ -0.22
RNF4-209ENST00000507784 GAMTQ14353 236 aa13.65□□□□□ -0.22
RNF4-209ENST00000507784 HSD17B11Q8NBQ5 300 aa13.65□□□□□ -0.22
RNF4-209ENST00000507784 SERTAD4Q9NUC0 356 aa13.65□□□□□ -0.22
RNF4-209ENST00000507784 H3BUA1 57 aa13.64□□□□□ -0.23
RNF4-209ENST00000507784 K7EIM0 57 aa13.64□□□□□ -0.23
RNF4-209ENST00000507784 IGHV3-23P01764 117 aa13.64□□□□□ -0.23
RNF4-209ENST00000507784 RND2P52198 227 aa13.64□□□□□ -0.23
RNF4-209ENST00000507784 ATP5G2Q06055 141 aa13.64□□□□□ -0.23
RNF4-209ENST00000507784 VWC2Q2TAL6 325 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms