RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 IGHV3OR16-13A0A075B7E8 117 aa9.85□□□□□ -0.83
POLR2J3-212ENST00000507355 TRAV14DV4A0A0A6YYC5 116 aa9.85□□□□□ -0.83
POLR2J3-212ENST00000507355 IGHV3-74A0A0B4J1X5 117 aa9.85□□□□□ -0.83
POLR2J3-212ENST00000507355 MT-CO2P00403 227 aa9.85□□□□□ -0.83
POLR2J3-212ENST00000507355 IGKV1-39P01597 117 aa9.85□□□□□ -0.83
POLR2J3-212ENST00000507355 IGKV1D-39P04432 117 aa9.85□□□□□ -0.83
POLR2J3-212ENST00000507355 S100GP29377 79 aa9.85□□□□□ -0.83
POLR2J3-212ENST00000507355 LPCAT3Q6P1A2 487 aa9.85□□□□□ -0.83
POLR2J3-212ENST00000507355 H2BFWTQ7Z2G1 175 aa9.85□□□□□ -0.83
POLR2J3-212ENST00000507355 TBC1D26Q86UD7 250 aa9.85□□□□□ -0.83
POLR2J3-212ENST00000507355 GBGT1Q8N5D6 347 aa9.85□□□□□ -0.83
POLR2J3-212ENST00000507355 OR4A16Q8NH70 328 aa9.85□□□□□ -0.83
POLR2J3-212ENST00000507355 OR10C1Q96KK4 312 aa9.85□□□□□ -0.83
POLR2J3-212ENST00000507355 RARRES2Q99969 163 aa9.85□□□□□ -0.83
POLR2J3-212ENST00000507355 NXF2Q9GZY0 626 aaKnown RBP9.85□□□□□ -0.83
POLR2J3-212ENST00000507355 FAM212BQ9NTI7 297 aaPredicted RBP9.85□□□□□ -0.83
POLR2J3-212ENST00000507355 MPTX1A8MV57 137 aa9.84□□□□□ -0.83
POLR2J3-212ENST00000507355 HSPE1P61604 102 aaKnown RBP9.84□□□□□ -0.83
POLR2J3-212ENST00000507355 KCTD21Q4G0X4 260 aa9.84□□□□□ -0.83
POLR2J3-212ENST00000507355 FAM90A2PQ658T7 463 aa9.84□□□□□ -0.83
POLR2J3-212ENST00000507355 GPX8Q8TED1 209 aa9.84□□□□□ -0.83
POLR2J3-212ENST00000507355 PINX1Q96BK5 328 aaKnown RBP9.84□□□□□ -0.83
POLR2J3-212ENST00000507355 CMTM3Q96MX0 182 aa9.84□□□□□ -0.83
POLR2J3-212ENST00000507355 GNG7O60262 68 aa9.83□□□□□ -0.84
POLR2J3-212ENST00000507355 EIF4EP06730 217 aaKnown RBP9.83□□□□□ -0.84
POLR2J3-212ENST00000507355 ERHP84090 104 aaKnown RBP9.83□□□□□ -0.84
POLR2J3-212ENST00000507355 PRCDQ00LT1 54 aa9.83□□□□□ -0.84
POLR2J3-212ENST00000507355 TCF24Q7RTU0 167 aa9.83□□□□□ -0.84
POLR2J3-212ENST00000507355 YIPF6Q96EC8 236 aa9.83□□□□□ -0.84
POLR2J3-212ENST00000507355 COMMD3Q9UBI1 195 aa9.83□□□□□ -0.84
POLR2J3-212ENST00000507355 ABCA13Q86UQ4 5058 aa9.83□□□□□ -0.84
POLR2J3-212ENST00000507355 SMIM31A0A1B0GVY4 71 aa9.82□□□□□ -0.84
POLR2J3-212ENST00000507355 APOHP02749 345 aaPredicted RBP9.82□□□□□ -0.84
POLR2J3-212ENST00000507355 UCP3P55916 312 aa9.82□□□□□ -0.84
POLR2J3-212ENST00000507355 PAFAH1B2P68402 229 aa9.82□□□□□ -0.84
POLR2J3-212ENST00000507355 IZUMO4Q1ZYL8 232 aa9.82□□□□□ -0.84
POLR2J3-212ENST00000507355 TOMM20LQ6UXN7 152 aa9.82□□□□□ -0.84
POLR2J3-212ENST00000507355 LILRB2Q8N423 598 aa9.82□□□□□ -0.84
POLR2J3-212ENST00000507355 ZNF114Q8NC26 417 aa9.82□□□□□ -0.84
POLR2J3-212ENST00000507355 OR11H2Q8NH07 326 aa9.82□□□□□ -0.84
POLR2J3-212ENST00000507355 MRGPRFQ96AM1 343 aa9.82□□□□□ -0.84
POLR2J3-212ENST00000507355 FBXL17Q9UF56 701 aa9.82□□□□□ -0.84
POLR2J3-212ENST00000507355 MUC4Q99102 2169 aa9.81□□□□□ -0.84
POLR2J3-212ENST00000507355 ST8SIA3O43173 380 aa9.81□□□□□ -0.84
POLR2J3-212ENST00000507355 NANOS2P60321 138 aaKnown RBP9.81□□□□□ -0.84
POLR2J3-212ENST00000507355 SPINK9Q5DT21 86 aa9.81□□□□□ -0.84
POLR2J3-212ENST00000507355 SNX29P2Q8IUI4 249 aa9.81□□□□□ -0.84
POLR2J3-212ENST00000507355 DUSP18Q8NEJ0 188 aa9.81□□□□□ -0.84
POLR2J3-212ENST00000507355 ST8SIA2Q92186 375 aa9.81□□□□□ -0.84
POLR2J3-212ENST00000507355 GINS3Q9BRX5 216 aa9.81□□□□□ -0.84
POLR2J3-212ENST00000507355 VSIRQ9H7M9 311 aa9.81□□□□□ -0.84
POLR2J3-212ENST00000507355 SCPEP1Q9HB40 452 aa9.81□□□□□ -0.84
POLR2J3-212ENST00000507355 FAT2Q9NYQ8 4349 aa9.81□□□□□ -0.84
POLR2J3-212ENST00000507355 IGHV3-66A0A0C4DH42 116 aa9.8□□□□□ -0.84
POLR2J3-212ENST00000507355 DNASE2O00115 360 aaPredicted RBP9.8□□□□□ -0.84
POLR2J3-212ENST00000507355 DFFBO76075 338 aa9.8□□□□□ -0.84
POLR2J3-212ENST00000507355 TMEM50AO95807 157 aa9.8□□□□□ -0.84
POLR2J3-212ENST00000507355 APOA1P02647 267 aa9.8□□□□□ -0.84
POLR2J3-212ENST00000507355 CD5P06127 495 aa9.8□□□□□ -0.84
POLR2J3-212ENST00000507355 NPBWR1P48145 328 aa9.8□□□□□ -0.84
POLR2J3-212ENST00000507355 DEFB131AP59861 70 aa9.8□□□□□ -0.84
POLR2J3-212ENST00000507355 C11orf45Q8TAV5 145 aa9.8□□□□□ -0.84
POLR2J3-212ENST00000507355 MS4A6AQ9H2W1 248 aa9.8□□□□□ -0.84
POLR2J3-212ENST00000507355 M0QYG6 137 aa9.79□□□□□ -0.84
POLR2J3-212ENST00000507355 DEFB4AO15263 64 aa9.79□□□□□ -0.84
POLR2J3-212ENST00000507355 CA1P00915 261 aaPredicted RBP9.79□□□□□ -0.84
POLR2J3-212ENST00000507355 IFNA4P05014 189 aa9.79□□□□□ -0.84
POLR2J3-212ENST00000507355 ELK1P19419 428 aa9.79□□□□□ -0.84
POLR2J3-212ENST00000507355 RCVRNP35243 200 aa9.79□□□□□ -0.84
POLR2J3-212ENST00000507355 SNCAP37840 140 aa9.79□□□□□ -0.84
POLR2J3-212ENST00000507355 RPL11P62913 178 aaKnown RBP9.79□□□□□ -0.84
POLR2J3-212ENST00000507355 RBMS2Q15434 407 aaKnown RBP9.79□□□□□ -0.84
POLR2J3-212ENST00000507355 LEMD1Q68G75 181 aa9.79□□□□□ -0.84
POLR2J3-212ENST00000507355 ZNF600Q6ZNG1 722 aa9.79□□□□□ -0.84
POLR2J3-212ENST00000507355 MFFQ9GZY8 342 aa9.79□□□□□ -0.84
POLR2J3-212ENST00000507355 ZFAND3Q9H8U3 227 aa9.79□□□□□ -0.84
POLR2J3-212ENST00000507355 PUS1Q9Y606 427 aaKnown RBP eCLIP9.79□□□□□ -0.84
POLR2J3-212ENST00000507355 DNAH2Q9P225 4427 aa9.78□□□□□ -0.84
POLR2J3-212ENST00000507355 A0A087WXM4 84 aa9.78□□□□□ -0.84
POLR2J3-212ENST00000507355 A0A0B4J293 547 aa9.78□□□□□ -0.84
POLR2J3-212ENST00000507355 A0A1B0GU03 582 aa9.78□□□□□ -0.84
POLR2J3-212ENST00000507355 HPGDSO60760 199 aa9.78□□□□□ -0.84
POLR2J3-212ENST00000507355 IFNA17P01571 189 aa9.78□□□□□ -0.84
POLR2J3-212ENST00000507355 IGKV1-5P01602 117 aa9.78□□□□□ -0.84
POLR2J3-212ENST00000507355 MED14OSP0DP75 135 aa9.78□□□□□ -0.84
POLR2J3-212ENST00000507355 PGAM2P15259 253 aa9.78□□□□□ -0.84
POLR2J3-212ENST00000507355 PI3P19957 117 aa9.78□□□□□ -0.84
POLR2J3-212ENST00000507355 NCS1P62166 190 aa9.78□□□□□ -0.84
POLR2J3-212ENST00000507355 TMEM187Q14656 261 aa9.78□□□□□ -0.84
POLR2J3-212ENST00000507355 FAM24BQ8N5W8 94 aa9.78□□□□□ -0.84
POLR2J3-212ENST00000507355 C11orf68Q9H3H3 251 aaKnown RBP9.78□□□□□ -0.84
POLR2J3-212ENST00000507355 VCX3AQ9NNX9 186 aa9.78□□□□□ -0.84
POLR2J3-212ENST00000507355 NPPCP23582 126 aa9.77□□□□□ -0.85
POLR2J3-212ENST00000507355 ETV6P41212 452 aa9.77□□□□□ -0.85
POLR2J3-212ENST00000507355 PIGPP57054 158 aa9.77□□□□□ -0.85
POLR2J3-212ENST00000507355 RND3P61587 244 aa9.77□□□□□ -0.85
POLR2J3-212ENST00000507355 VBP1P61758 197 aa9.77□□□□□ -0.85
POLR2J3-212ENST00000507355 MLANAQ16655 118 aa9.77□□□□□ -0.85
POLR2J3-212ENST00000507355 RNASE12Q5GAN4 147 aaKnown RBP9.77□□□□□ -0.85
POLR2J3-212ENST00000507355 PVRIGQ6DKI7 326 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms