RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 AMBNQ9NP70 447 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 BET1LQ9NYM9 111 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 RBMX2Q9Y388 322 aaKnown RBP4.91□□□□□ -1.62
VCAN-207ENST00000507162 F11RQ9Y624 299 aaKnown RBP4.91□□□□□ -1.62
VCAN-207ENST00000507162 TNXBP22105 4242 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 TEX50A0A1B0GTY4 177 aa4.9□□□□□ -1.63
VCAN-207ENST00000507162 CBY3A6NI87 242 aa4.9□□□□□ -1.63
VCAN-207ENST00000507162 SNTNA6NMZ2 147 aa4.9□□□□□ -1.63
VCAN-207ENST00000507162 UPK2O00526 184 aa4.9□□□□□ -1.63
VCAN-207ENST00000507162 SIVA1O15304 175 aa4.9□□□□□ -1.63
VCAN-207ENST00000507162 HLA-DRB4P13762 266 aa4.9□□□□□ -1.63
VCAN-207ENST00000507162 CD36P16671 472 aa4.9□□□□□ -1.63
VCAN-207ENST00000507162 EIF2B2P49770 351 aaKnown RBP4.9□□□□□ -1.63
VCAN-207ENST00000507162 UNC119Q13432 240 aa4.9□□□□□ -1.63
VCAN-207ENST00000507162 TIMM50Q3ZCQ8 353 aa4.9□□□□□ -1.63
VCAN-207ENST00000507162 CCDC58Q4VC31 144 aa4.9□□□□□ -1.63
VCAN-207ENST00000507162 KDM4DQ6B0I6 523 aa4.9□□□□□ -1.63
VCAN-207ENST00000507162 SPATA24Q86W54 205 aa4.9□□□□□ -1.63
VCAN-207ENST00000507162 PQLC1Q8N2U9 271 aa4.9□□□□□ -1.63
VCAN-207ENST00000507162 OR4C16Q8NGL9 310 aa4.9□□□□□ -1.63
VCAN-207ENST00000507162 RXFP4Q8TDU9 374 aa4.9□□□□□ -1.63
VCAN-207ENST00000507162 TRUB1Q8WWH5 349 aaKnown RBP4.9□□□□□ -1.63
VCAN-207ENST00000507162 NARS2Q96I59 477 aaKnown RBP4.9□□□□□ -1.63
VCAN-207ENST00000507162 ARHGAP5-AS1Q96IT6 56 aa4.9□□□□□ -1.63
VCAN-207ENST00000507162 GPHA2Q96T91 129 aa4.9□□□□□ -1.63
VCAN-207ENST00000507162 CIB1Q99828 191 aa4.9□□□□□ -1.63
VCAN-207ENST00000507162 PECRQ9BY49 303 aa4.9□□□□□ -1.63
VCAN-207ENST00000507162 SLC35B3Q9H1N7 401 aa4.9□□□□□ -1.63
VCAN-207ENST00000507162 HLA-DRB4X5D2U9 266 aa4.9□□□□□ -1.63
VCAN-207ENST00000507162 AQP12BA6NM10 295 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 NPIPB6E9PJ23 425 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 OGG1O15527 345 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 HOXA1P49639 335 aaPredicted RBP4.89□□□□□ -1.63
VCAN-207ENST00000507162 PPP5CP53041 499 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 TMEM50BP56557 158 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 BRWD1-AS2P59051 145 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 RBM48Q5RL73 367 aaKnown RBP4.89□□□□□ -1.63
VCAN-207ENST00000507162 GDF5OSQ5U4N7 250 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 MEDAGQ5VYS4 303 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 ZNF600Q6ZNG1 722 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 AQP12AQ8IXF9 295 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 H1FOOQ8IZA3 346 aaPredicted RBP4.89□□□□□ -1.63
VCAN-207ENST00000507162 CADM3Q8N126 398 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 ZFP41Q8N8Y5 198 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 DMBX1Q8NFW5 382 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 OR1L8Q8NGR8 309 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 PINX1Q96BK5 328 aaKnown RBP4.89□□□□□ -1.63
VCAN-207ENST00000507162 LINC00052Q96N35 136 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 METTL26Q96S19 204 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 HSD17B10Q99714 261 aaKnown RBP4.89□□□□□ -1.63
VCAN-207ENST00000507162 TXN2Q99757 166 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 SLC29A1Q99808 456 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 AIFM2Q9BRQ8 373 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 URM1Q9BTM9 101 aaKnown RBP4.89□□□□□ -1.63
VCAN-207ENST00000507162 CABLES2Q9BTV7 478 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 TAS2R8Q9NYW2 309 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 ARL2BPQ9Y2Y0 163 aa4.89□□□□□ -1.63
VCAN-207ENST00000507162 A0A1B0GU03 582 aa4.88□□□□□ -1.63
VCAN-207ENST00000507162 FAM90A26D6RGX4 464 aa4.88□□□□□ -1.63
VCAN-207ENST00000507162 EBAG9O00559 213 aa4.88□□□□□ -1.63
VCAN-207ENST00000507162 RS1O15537 224 aa4.88□□□□□ -1.63
VCAN-207ENST00000507162 MT-CO2P00403 227 aa4.88□□□□□ -1.63
VCAN-207ENST00000507162 MT1HL1P0DM35 61 aa4.88□□□□□ -1.63
VCAN-207ENST00000507162 HOXB6P17509 224 aaKnown RBP4.88□□□□□ -1.63
VCAN-207ENST00000507162 KRTAP10-4P60372 401 aaPredicted RBP4.88□□□□□ -1.63
VCAN-207ENST00000507162 RPS11P62280 158 aaKnown RBP eCLIP4.88□□□□□ -1.63
VCAN-207ENST00000507162 PSG9Q00887 426 aa4.88□□□□□ -1.63
VCAN-207ENST00000507162 TMPRSS11AQ6ZMR5 421 aa4.88□□□□□ -1.63
VCAN-207ENST00000507162 HSD17B13Q7Z5P4 300 aaPredicted RBP4.88□□□□□ -1.63
VCAN-207ENST00000507162 NKAIN3Q8N8D7 197 aa4.88□□□□□ -1.63
VCAN-207ENST00000507162 OR52I1Q8NGK6 324 aa4.88□□□□□ -1.63
VCAN-207ENST00000507162 TMEM230Q96A57 120 aa4.88□□□□□ -1.63
VCAN-207ENST00000507162 SMIM19Q96E16 107 aa4.88□□□□□ -1.63
VCAN-207ENST00000507162 LPAR5Q9H1C0 372 aa4.88□□□□□ -1.63
VCAN-207ENST00000507162 BABAM2Q9NXR7 383 aa4.88□□□□□ -1.63
VCAN-207ENST00000507162 PNMA8CA0A1B0GUJ8 204 aa4.87□□□□□ -1.63
VCAN-207ENST00000507162 TMEM14DPA8MWL7 114 aa4.87□□□□□ -1.63
VCAN-207ENST00000507162 I3L2K1 104 aa4.87□□□□□ -1.63
VCAN-207ENST00000507162 TNFSF12O43508 249 aa4.87□□□□□ -1.63
VCAN-207ENST00000507162 C1QBP02746 253 aa4.87□□□□□ -1.63
VCAN-207ENST00000507162 FCGR3AP08637 254 aa4.87□□□□□ -1.63
VCAN-207ENST00000507162 LIMS3P0CW19 117 aa4.87□□□□□ -1.63
VCAN-207ENST00000507162 LIMS4P0CW20 117 aa4.87□□□□□ -1.63
VCAN-207ENST00000507162 M6PRP20645 277 aa4.87□□□□□ -1.63
VCAN-207ENST00000507162 NFYAP23511 347 aaPredicted RBP4.87□□□□□ -1.63
VCAN-207ENST00000507162 CRYBB3P26998 211 aa4.87□□□□□ -1.63
VCAN-207ENST00000507162 RASSF2P50749 326 aa4.87□□□□□ -1.63
VCAN-207ENST00000507162 AP2S1P53680 142 aaPredicted RBP4.87□□□□□ -1.63
VCAN-207ENST00000507162 SSX1Q16384 188 aa4.87□□□□□ -1.63
VCAN-207ENST00000507162 KCTD21Q4G0X4 260 aa4.87□□□□□ -1.63
VCAN-207ENST00000507162 ACSM3Q53FZ2 586 aa4.87□□□□□ -1.63
VCAN-207ENST00000507162 TOR2AQ5JU69 321 aa4.87□□□□□ -1.63
VCAN-207ENST00000507162 SPAG16Q8N0X2 631 aa4.87□□□□□ -1.63
VCAN-207ENST00000507162 ZNF709Q8N972 641 aa4.87□□□□□ -1.63
VCAN-207ENST00000507162 NTN5Q8WTR8 489 aaPredicted RBP4.87□□□□□ -1.63
VCAN-207ENST00000507162 LSM10Q969L4 123 aaKnown RBP4.87□□□□□ -1.63
VCAN-207ENST00000507162 DERL3Q96Q80 235 aa4.87□□□□□ -1.63
VCAN-207ENST00000507162 AP5S1Q9NUS5 200 aa4.87□□□□□ -1.63
VCAN-207ENST00000507162 TMEM140Q9NV12 185 aa4.87□□□□□ -1.63
VCAN-207ENST00000507162 TRAV9-2A0A087WT02 112 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms