RNA–Protein interactions for RNA: ENST00000507001.1

SPCS3-202, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 478 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-202ENST00000507001 IAH1Q2TAA2 248 aaPredicted RBP1.89□□□□□ -2.11
SPCS3-202ENST00000507001 TMEM97Q5BJF2 176 aa1.89□□□□□ -2.11
SPCS3-202ENST00000507001 TMEM42Q69YG0 159 aa1.89□□□□□ -2.11
SPCS3-202ENST00000507001 C9orf163Q8N9P6 203 aa1.89□□□□□ -2.11
SPCS3-202ENST00000507001 OR13C4Q8NGS5 318 aa1.89□□□□□ -2.11
SPCS3-202ENST00000507001 H1FXQ92522 213 aaKnown RBP1.89□□□□□ -2.11
SPCS3-202ENST00000507001 TOMM6Q96B49 74 aa1.89□□□□□ -2.11
SPCS3-202ENST00000507001 SIGMAR1Q99720 223 aa1.89□□□□□ -2.11
SPCS3-202ENST00000507001 CMSS1Q9BQ75 279 aaKnown RBP1.89□□□□□ -2.11
SPCS3-202ENST00000507001 CENPHQ9H3R5 247 aa1.89□□□□□ -2.11
SPCS3-202ENST00000507001 BATF3Q9NR55 127 aa1.89□□□□□ -2.11
SPCS3-202ENST00000507001 TAS2R7Q9NYW3 318 aa1.89□□□□□ -2.11
SPCS3-202ENST00000507001 ERICH3Q5RHP9 1530 aa1.89□□□□□ -2.11
SPCS3-202ENST00000507001 NISCHQ9Y2I1 1504 aa1.89□□□□□ -2.11
SPCS3-202ENST00000507001 SCAF11Q99590 1463 aaKnown RBP1.88□□□□□ -2.11
SPCS3-202ENST00000507001 NUP155O75694 1391 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 CCNB3Q8WWL7 1395 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 STRCP1A6NGW2 1772 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 UQCRHLA0A096LP55 91 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 H3BQV1 296 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 CIAO1O76071 339 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 GPX1P07203 203 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 UQCRHP07919 91 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 HSD11B1P28845 292 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 DEFA3P59666 94 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 SPA17Q15506 151 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 COA5Q86WW8 74 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 OR6V1Q8N148 313 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 TMEM86AQ8N2M4 240 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 MCFD2Q8NI22 146 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 RASSF5Q8WWW0 418 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 C9orf16Q9BUW7 83 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 FAM107BQ9H098 131 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 TLNRD1Q9H1K6 362 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 PARVBQ9HBI1 364 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 BAIAP2Q9UQB8 552 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 RGS12O14924 1447 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 SOGA1O94964 1423 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 RRBP1Q9P2E9 1410 aaKnown RBP1.88□□□□□ -2.11
SPCS3-202ENST00000507001 CPAMD8Q8IZJ3 1885 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 ZFHX2Q9C0A1 2572 aaPredicted RBP1.88□□□□□ -2.11
SPCS3-202ENST00000507001 DOCK10Q96BY6 2186 aa1.88□□□□□ -2.11
SPCS3-202ENST00000507001 MAST2Q6P0Q8 1798 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 BUB1B-PAK6H3BSN5 160 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 PIRO00625 290 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 PDE6DO43924 150 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 SMIM24O75264 130 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 FXYD2P54710 66 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 HIST1H3AP68431 136 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 H3F3AP84243 136 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 ALX1Q15699 326 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 MOGQ16653 247 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 NDUFA5Q16718 116 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 FAM173BQ6P4H8 233 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 C7orf65Q6ZTY9 151 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 STX12Q86Y82 276 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 CLVS1Q8IUQ0 354 aaPredicted RBP1.87□□□□□ -2.11
SPCS3-202ENST00000507001 OR52R1Q8NGF1 315 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 CT55Q8WUE5 264 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 DNAJC9Q8WXX5 260 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 TMEM106AQ96A25 262 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 C6orf62Q9GZU0 229 aaPredicted RBP1.87□□□□□ -2.11
SPCS3-202ENST00000507001 CNTLNQ9NXG0 1405 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 CYSLTR1Q9Y271 337 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 MDC1Q14676 2089 aaKnown RBP1.87□□□□□ -2.11
SPCS3-202ENST00000507001 GREB1Q4ZG55 1949 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 HECW1Q76N89 1606 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 WDR7Q9Y4E6 1490 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 TTC21AQ8NDW8 1320 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 PTPRBP23467 1997 aa1.87□□□□□ -2.11
SPCS3-202ENST00000507001 CPDO75976 1380 aa1.86□□□□□ -2.11
SPCS3-202ENST00000507001 COL5A3P25940 1745 aaPredicted RBP1.86□□□□□ -2.11
SPCS3-202ENST00000507001 THOC2Q8NI27 1593 aaKnown RBP1.86□□□□□ -2.11
SPCS3-202ENST00000507001 RB1CC1Q8TDY2 1594 aa1.86□□□□□ -2.11
SPCS3-202ENST00000507001 IBA57-AS1B1ANH7 110 aa1.86□□□□□ -2.11
SPCS3-202ENST00000507001 HMGN1P05114 100 aa1.86□□□□□ -2.11
SPCS3-202ENST00000507001 SMIM10L2AP0DMW4 78 aa1.86□□□□□ -2.11
SPCS3-202ENST00000507001 SMIM10L2BP0DMW5 78 aa1.86□□□□□ -2.11
SPCS3-202ENST00000507001 CAPZBP47756 277 aa1.86□□□□□ -2.11
SPCS3-202ENST00000507001 ZNF80P51504 273 aaPredicted RBP1.86□□□□□ -2.11
SPCS3-202ENST00000507001 VBP1P61758 197 aa1.86□□□□□ -2.11
SPCS3-202ENST00000507001 MRPS25P82663 173 aaKnown RBP1.86□□□□□ -2.11
SPCS3-202ENST00000507001 NUMA1Q14980 2115 aa1.86□□□□□ -2.11
SPCS3-202ENST00000507001 C12orf74Q32Q52 190 aa1.86□□□□□ -2.11
SPCS3-202ENST00000507001 SPANXN3Q5MJ09 141 aa1.86□□□□□ -2.11
SPCS3-202ENST00000507001 OR8B3Q8NGG8 313 aa1.86□□□□□ -2.11
SPCS3-202ENST00000507001 OR51A2Q8NGJ7 313 aa1.86□□□□□ -2.11
SPCS3-202ENST00000507001 KRTAP4-1Q9BYQ7 146 aa1.86□□□□□ -2.11
SPCS3-202ENST00000507001 CCDC90BQ9GZT6 254 aa1.86□□□□□ -2.11
SPCS3-202ENST00000507001 CST9LQ9H4G1 147 aa1.86□□□□□ -2.11
SPCS3-202ENST00000507001 ANKRD30AQ9BXX3 1397 aa1.85□□□□□ -2.11
SPCS3-202ENST00000507001 MIA2Q96PC5 1412 aa1.85□□□□□ -2.11
SPCS3-202ENST00000507001 COL11A1P12107 1806 aaPredicted RBP1.85□□□□□ -2.11
SPCS3-202ENST00000507001 VIRMAQ69YN4 1812 aaKnown RBP1.85□□□□□ -2.11
SPCS3-202ENST00000507001 hCG_1818297A0A087WSY0 165 aa1.85□□□□□ -2.11
SPCS3-202ENST00000507001 A8MT66 165 aa1.85□□□□□ -2.11
SPCS3-202ENST00000507001 SERPINA1P01009 418 aa1.85□□□□□ -2.11
SPCS3-202ENST00000507001 NFYAP23511 347 aaPredicted RBP1.85□□□□□ -2.11
SPCS3-202ENST00000507001 ARHGAP11BQ3KRB8 267 aa1.85□□□□□ -2.11
SPCS3-202ENST00000507001 AKIRIN2Q53H80 203 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms