RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 LY86O95711 162 aa12.74□□□□□ -0.37
SNCA-209ENST00000506244 SMCO1Q147U7 214 aa12.74□□□□□ -0.37
SNCA-209ENST00000506244 NMSQ5H8A3 153 aa12.74□□□□□ -0.37
SNCA-209ENST00000506244 Q6ZRM9 215 aa12.74□□□□□ -0.37
SNCA-209ENST00000506244 LRTM2Q8N967 370 aa12.74□□□□□ -0.37
SNCA-209ENST00000506244 WDR12Q9GZL7 423 aaKnown RBP12.74□□□□□ -0.37
SNCA-209ENST00000506244 PRR13Q9NZ81 148 aa12.74□□□□□ -0.37
SNCA-209ENST00000506244 WI2-2373I1.2A0A1W2PRP0 233 aa12.73□□□□□ -0.37
SNCA-209ENST00000506244 CEBPZOSA8MTT3 80 aa12.73□□□□□ -0.37
SNCA-209ENST00000506244 OR2C1O95371 312 aa12.73□□□□□ -0.37
SNCA-209ENST00000506244 SFT2D2O95562 160 aa12.73□□□□□ -0.37
SNCA-209ENST00000506244 IGLV1-51P01701 117 aa12.73□□□□□ -0.37
SNCA-209ENST00000506244 HLA-AP01891 365 aaKnown RBP12.73□□□□□ -0.37
SNCA-209ENST00000506244 PPP1R1AQ13522 171 aa12.73□□□□□ -0.37
SNCA-209ENST00000506244 Q56UQ5 140 aa12.73□□□□□ -0.37
SNCA-209ENST00000506244 LYZL2Q7Z4W2 148 aa12.73□□□□□ -0.37
SNCA-209ENST00000506244 SCARB1Q8WTV0 552 aa12.73□□□□□ -0.37
SNCA-209ENST00000506244 TXN2Q99757 166 aa12.73□□□□□ -0.37
SNCA-209ENST00000506244 PALMDQ9NP74 551 aa12.73□□□□□ -0.37
SNCA-209ENST00000506244 A0A1B0GU03 582 aa12.72□□□□□ -0.37
SNCA-209ENST00000506244 OR2T8A6NH00 312 aa12.72□□□□□ -0.37
SNCA-209ENST00000506244 A8MWP6 167 aa12.72□□□□□ -0.37
SNCA-209ENST00000506244 LYRM1O43325 122 aa12.72□□□□□ -0.37
SNCA-209ENST00000506244 MT-CO2P00403 227 aa12.72□□□□□ -0.37
SNCA-209ENST00000506244 CSN3P07498 182 aa12.72□□□□□ -0.37
SNCA-209ENST00000506244 FCGR2BP31994 310 aaPredicted RBP12.72□□□□□ -0.37
SNCA-209ENST00000506244 BTCP35070 178 aa12.72□□□□□ -0.37
SNCA-209ENST00000506244 HTR2BP41595 481 aa12.72□□□□□ -0.37
SNCA-209ENST00000506244 MFAP4P55083 255 aa12.72□□□□□ -0.37
SNCA-209ENST00000506244 LCN12Q6JVE5 192 aa12.72□□□□□ -0.37
SNCA-209ENST00000506244 UBAC2Q8NBM4 344 aa12.72□□□□□ -0.37
SNCA-209ENST00000506244 OR2K2Q8NGT1 345 aa12.72□□□□□ -0.37
SNCA-209ENST00000506244 DYNLRB2Q8TF09 96 aa12.72□□□□□ -0.37
SNCA-209ENST00000506244 PINX1Q96BK5 328 aaKnown RBP12.72□□□□□ -0.37
SNCA-209ENST00000506244 HIPK2Q9H2X6 1198 aa12.72□□□□□ -0.37
SNCA-209ENST00000506244 HEYLQ9NQ87 328 aaPredicted RBP12.72□□□□□ -0.37
SNCA-209ENST00000506244 TMED3Q9Y3Q3 217 aa12.72□□□□□ -0.37
SNCA-209ENST00000506244 IGHV3-21A0A0B4J1V1 117 aa12.71□□□□□ -0.37
SNCA-209ENST00000506244 ZNF320A2RRD8 509 aa12.71□□□□□ -0.37
SNCA-209ENST00000506244 I3L2K1 104 aa12.71□□□□□ -0.37
SNCA-209ENST00000506244 NUPL2O15504 423 aaKnown RBP12.71□□□□□ -0.37
SNCA-209ENST00000506244 SCGB2A1O75556 95 aa12.71□□□□□ -0.37
SNCA-209ENST00000506244 RNASE2P10153 161 aaKnown RBP12.71□□□□□ -0.37
SNCA-209ENST00000506244 SLC25A6P12236 298 aa12.71□□□□□ -0.37
SNCA-209ENST00000506244 SPNP16150 400 aa12.71□□□□□ -0.37
SNCA-209ENST00000506244 RELQ04864 619 aaPredicted RBP12.71□□□□□ -0.37
SNCA-209ENST00000506244 TNFRSF9Q07011 255 aa12.71□□□□□ -0.37
SNCA-209ENST00000506244 ANKRD55Q3KP44 614 aa12.71□□□□□ -0.37
SNCA-209ENST00000506244 IL34Q6ZMJ4 242 aa12.71□□□□□ -0.37
SNCA-209ENST00000506244 NOXA1Q86UR1 476 aa12.71□□□□□ -0.37
SNCA-209ENST00000506244 OR1S1Q8NH92 325 aa12.71□□□□□ -0.37
SNCA-209ENST00000506244 PRR25Q96S07 402 aa12.71□□□□□ -0.37
SNCA-209ENST00000506244 UFC1Q9Y3C8 167 aa12.71□□□□□ -0.37
SNCA-209ENST00000506244 C2orf70A6NJV1 201 aa12.7□□□□□ -0.38
SNCA-209ENST00000506244 GP9P14770 177 aa12.7□□□□□ -0.38
SNCA-209ENST00000506244 NPBWR1P48145 328 aa12.7□□□□□ -0.38
SNCA-209ENST00000506244 ZNF846Q147U1 533 aa12.7□□□□□ -0.38
SNCA-209ENST00000506244 BSXQ3C1V8 233 aa12.7□□□□□ -0.38
SNCA-209ENST00000506244 DEFB121Q5J5C9 76 aa12.7□□□□□ -0.38
SNCA-209ENST00000506244 PVRIGQ6DKI7 326 aa12.7□□□□□ -0.38
SNCA-209ENST00000506244 SLC24A4Q8NFF2 622 aa12.7□□□□□ -0.38
SNCA-209ENST00000506244 COQ8AQ8NI60 647 aa12.7□□□□□ -0.38
SNCA-209ENST00000506244 MARC2Q969Z3 335 aa12.7□□□□□ -0.38
SNCA-209ENST00000506244 ZNF436Q9C0F3 470 aaPredicted RBP12.7□□□□□ -0.38
SNCA-209ENST00000506244 ZC4H2Q9NQZ6 224 aa12.7□□□□□ -0.38
SNCA-209ENST00000506244 HSPB7Q9UBY9 170 aa12.7□□□□□ -0.38
SNCA-209ENST00000506244 RPS10-NUDT3A0A1W2PQS6 291 aa12.69□□□□□ -0.38
SNCA-209ENST00000506244 C9orf170A2RU37 121 aa12.69□□□□□ -0.38
SNCA-209ENST00000506244 NDUFA4O00483 81 aa12.69□□□□□ -0.38
SNCA-209ENST00000506244 GNG7O60262 68 aa12.69□□□□□ -0.38
SNCA-209ENST00000506244 OR4E1P0C645 316 aa12.69□□□□□ -0.38
SNCA-209ENST00000506244 OPRK1P41145 380 aa12.69□□□□□ -0.38
SNCA-209ENST00000506244 ELLP55199 621 aaPredicted RBP12.69□□□□□ -0.38
SNCA-209ENST00000506244 DHRS2Q13268 280 aa12.69□□□□□ -0.38
SNCA-209ENST00000506244 C4orf46Q504U0 113 aa12.69□□□□□ -0.38
SNCA-209ENST00000506244 HAPLN4Q86UW8 402 aa12.69□□□□□ -0.38
SNCA-209ENST00000506244 DUSP18Q8NEJ0 188 aa12.69□□□□□ -0.38
SNCA-209ENST00000506244 TMEM190Q8WZ59 177 aa12.69□□□□□ -0.38
SNCA-209ENST00000506244 C20orf85Q9H1P6 137 aa12.69□□□□□ -0.38
SNCA-209ENST00000506244 TECRQ9NZ01 308 aaKnown RBP12.69□□□□□ -0.38
SNCA-209ENST00000506244 SORL1Q92673 2214 aa12.68□□□□□ -0.38
SNCA-209ENST00000506244 FAM90A26D6RGX4 464 aa12.68□□□□□ -0.38
SNCA-209ENST00000506244 F8W735 103 aaPredicted RBP12.68□□□□□ -0.38
SNCA-209ENST00000506244 PLA2G10O15496 165 aa12.68□□□□□ -0.38
SNCA-209ENST00000506244 NXPH3O95157 252 aa12.68□□□□□ -0.38
SNCA-209ENST00000506244 C2orf83Q53S99 150 aa12.68□□□□□ -0.38
SNCA-209ENST00000506244 MZT2BQ6NZ67 158 aa12.68□□□□□ -0.38
SNCA-209ENST00000506244 LYG2Q86SG7 212 aa12.68□□□□□ -0.38
SNCA-209ENST00000506244 RNASEH2CQ8TDP1 164 aaKnown RBP12.68□□□□□ -0.38
SNCA-209ENST00000506244 DTD1Q8TEA8 209 aa12.68□□□□□ -0.38
SNCA-209ENST00000506244 DAZ1Q9NQZ3 744 aaKnown RBP12.68□□□□□ -0.38
SNCA-209ENST00000506244 FLVCR2Q9UPI3 526 aa12.68□□□□□ -0.38
SNCA-209ENST00000506244 TMEM213A2RRL7 107 aa12.67□□□□□ -0.38
SNCA-209ENST00000506244 MED6O75586 246 aa12.67□□□□□ -0.38
SNCA-209ENST00000506244 FOLR2P14207 255 aa12.67□□□□□ -0.38
SNCA-209ENST00000506244 NPY1RP25929 384 aa12.67□□□□□ -0.38
SNCA-209ENST00000506244 ATP5IP56385 69 aaPredicted RBP12.67□□□□□ -0.38
SNCA-209ENST00000506244 CHRDL1Q9BU40 450 aa12.67□□□□□ -0.38
SNCA-209ENST00000506244 U3KQ87 197 aa12.67□□□□□ -0.38
SNCA-209ENST00000506244 IGHV3-35A0A0C4DH35 117 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 283.6 ms